Array 1 295352-297260 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSJG01000001.1 Phocaeicola plebeius strain AM31-10 AM31-10.Scaf1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 295352 36 100.0 30 .................................... AAGCATAACCTTTACCAGCCAGTGTTCCCA 295418 36 100.0 28 .................................... TAATGGTACACCAAATCCTAGCATGGTC 295482 36 100.0 29 .................................... AAGATTGATACAGCATCATTAATCAGCAT 295547 36 100.0 27 .................................... CATATCTCCCACTATTTTAAAGTCCTA 295610 36 100.0 29 .................................... GATACCACCGCTTCAAAGTCGATTGTTGT 295675 36 100.0 28 .................................... ACTAGGTGTTTTCATCTTAATTATGTTT 295739 36 100.0 28 .................................... CTCTCGGTTCTCATACGATTAATATTTA 295803 36 100.0 28 .................................... CTGACCTCCGTTGTTGTCTTTCGGCGGG 295867 36 100.0 28 .................................... AGTAAAGTGTGCTCCTTTCTTGAATCCT 295931 36 100.0 29 .................................... GCATACTGTACATTCAGGTCGAATATTAT 295996 36 100.0 29 .................................... GAGTATTCCTGCTCCATATCCATAAGGTT 296061 36 100.0 27 .................................... TTTTATCTCGCCTTTGTACAGTCCGAC 296124 36 100.0 28 .................................... AAGGCTCCCTTGCGGTCTTTTGCCAGAA 296188 36 100.0 30 .................................... GGTCGCTCTTTGCGTTACAACTTCCGTCGG 296254 36 100.0 29 .................................... CAGCCTTGAATGGACTTACACCCCCCGAA 296319 36 100.0 30 .................................... GTCTCAGTATCGCTGGTCAAGCCGAATGAG 296385 36 100.0 30 .................................... AGGATAAGGGTAAAGACAAGCCGCAATAGA 296451 36 100.0 29 .................................... TAACAGAATCTTTTCCATCATTCATCGCC 296516 36 100.0 27 .................................... TTAGCGGCGTGATAGGGAAAACAGGGA 296579 36 100.0 30 .................................... ATGATCTTCTATTTTTAAATGGTTATTAAG 296645 36 100.0 28 .................................... TTCAGATCAGAACCTCTGTATATCTCGC 296709 36 100.0 28 .................................... GCTTCGCGTCTCAATACTGATTTAGATA 296773 36 100.0 29 .................................... AGAGCTGCCAGAATGTTATTATAAGTGTT 296838 36 100.0 30 .................................... AGATATTGGTTGAACTGGTCCTGCAGGGAG 296904 36 100.0 27 .................................... AGATTCCGCGATAATGCGCTACAAACT 296967 36 100.0 29 .................................... AGTTGACACAAACAATGAGGAGTTTTTAA 297032 36 100.0 28 .................................... GAACGGCTTAAAATACATCTGAAATGTT 297096 36 100.0 29 .................................... GTCGGCGGCTGGTGGGGGCTTGCTTGGGT 297161 36 100.0 28 .................................... GCGAAGCTATCGGCACCTTCCTGGTAGA 297225 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 100.0 29 GTCTATATGACTAAGTAATTTCTACTATGTGTAGAT # Left flank : TTATAGATTTTTTATGCAGAGAAAATCAGAAACAGAGTTCCCTTTATTTAAATATTAATGGTAATAGTTAGTTATGACATATCGGATGACCTTATCCGCTCTCGATTTCAGAGAATGCTGACTAAAAATGGTGCAATTCGTTTGCAATATTCAGTTTATGAAGTCGTTAATACAAAAAGAGTGATTGAGAATATAAAATTAAAGATTGTTGCGTATTCCAAACATTTTAGTGCAGATGATAGTGTGGTCATTTTTGAGATAAATAAGGATACCTTGGTAAAATACGGGAATGCCATTCATCGCGATACTGATATAGTTTTCTTCTAATAATTATAGGCATTACAAACCTAAGTCTTCTATATCAATAACATAGTTTGTAATATGCTGATTTACAATGCATCTATTGAATTCTATAGATTAAGGTGGGGAAATATTCCGATAAAAATATAGGCTTATTTATTTGATTATTAATAAAAAATATGGATATTTGCATAGTAAGA # Right flank : TGGTACAAAAAAGGGTAACCATTCTATTTTCCGCCTTGACATAAGTTGTTAGCCGACATATCTTTGC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTATATGACTAAGTAATTTCTACTATGTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //