Array 1 639033-637227 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053797.1 Vibrio cholerae strain SL4G chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 639032 32 100.0 35 ................................ ATAAGCACTACATAACAACCTCCTTGGTGGTCGGT 638965 32 100.0 35 ................................ ACGATAAATCTTCTTCTGAAGGTCTTGTCTATAGA 638898 32 100.0 33 ................................ AGTAGAAGACTGGCGAGAAAAAGGCGGCTTGCC 638833 32 100.0 33 ................................ AGCGCAAAGCTGAATGGGTAAGAGTTCATGAAG 638768 32 100.0 34 ................................ CCGCTCAAGTTGCACATCGTAATAAGTGCGCTGT 638702 32 100.0 35 ................................ TGGCAGAAAGAAAAGCGCGAGCCGAATACGATGGA 638635 32 100.0 33 ................................ TCGCCACCTGCGTAAACCCAATAGTTGAGTTCG 638570 32 100.0 33 ................................ CCGTTACGTAACGGAAACCGCGCTTATACATTT 638505 32 100.0 34 ................................ CAGCGCGACACAATCACATCGAAAGACTGATCAT 638439 32 100.0 34 ................................ CATTACTTGATAGAAAGCGACCAAATACTCAATA 638373 32 100.0 34 ................................ GATAAAATCGAGTCTCAGGTACTCAAGGCTGCAA 638307 32 100.0 33 ................................ TTCCACGTAAAGCCTAACACCATTCGGCGCTGG 638242 32 100.0 33 ................................ TCGCGTGAGTTTAAAGATCAGGACATGAGCGGC 638177 32 100.0 33 ................................ TTTAGACATTTCACTTGCAATCAACGTGTCAAA 638112 32 100.0 33 ................................ GCGTATGTTTTCAAAAAGCAGGAACTGAGCAGT 638047 32 100.0 33 ................................ TTTGATTCTCATTATGTTTGATAACACTAATTG 637982 32 100.0 35 ................................ CACATCACAAGCGTGAACTGCGGCGCGAGTGTTTT 637915 32 100.0 33 ................................ ATACTGCCAAGTTGACACCAGCACATCATCACG 637850 32 100.0 33 ................................ AAGATAGATTCAACAGACGGAAGACGTGCAAAG 637785 32 100.0 34 ................................ ATGGTTACTTACGCTGCTGTTGAAAGTGACGCTG 637719 32 100.0 34 ................................ TTTGCCGTCAAGCTCAACCACAGTCACTTCAATG 637653 32 100.0 34 ................................ CAACGAACGCATTAAAAACCTACAAGAACTATCG 637587 32 96.9 34 ..........T..................... AGAACTGGCTCAAGTGGGGTGAAACTGCACTTTG 637521 32 100.0 34 ................................ CTGCTCAAGCTGCACATCGTAATAGGTGCGCTGT 637455 32 100.0 34 ................................ GTTGTTGCTGCAGGCGAGTTGTTCCCCGTTCATG 637389 32 100.0 33 ................................ TTTTTCTCGGCAATCGTCTCGGGTGTAGATGCC 637324 32 100.0 34 ................................ TCATCAAGCAAGTCATAGCCTGAAAGCTTGGCTG 637258 32 93.8 0 ......................T........T | ========== ====== ====== ====== ================================ =================================== ================== 28 32 99.7 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : CCATTTGTGATCAAAAAATAAGGAGCGAGCCATGATGGTATTGGTCACCTACGATGTATCCTTTGCCAGTGAAGATGGTCAAAATCGCCTCAGACAATTAGCTAAGGTGTGTTTAGATAATGGAGTAAGGGTGCAGTATTCTGTATTTGAATGCGAAATAGATGCCGCGCAATGGCTGCGCTTTAAAAATAAGCTGCTGTCAATTTACGACCCTGAAGTAGACAGTTTGCGTTTTTATAAGCTTGGTAAAAACTGGCAAAACAAAGTAGAGCACCATGGTGCGAAAGATGCCATAGATATATTCAGAGATACCCTAATTTTATAGTCGCTAGGCTTGAGTCCTCAGTAAAACACTGGGGATCTAGCGATTGTGTAAGCTCTTTAAAAATATAGGAAATAATTAATTATATAGATTCACACAAAGTAGTTTTGTGCTACCGCGCAAAGTTAGCGGTAACTAATAGAGTGTGTTAGTTTGTACGTTCCTCTAAGAAGAGGCA # Right flank : AAGTATTGTCACATTATTGCAGGCAATTTGTTGCCCGTGAGCAAGTTTTTGCCTCGCCAATTTTCGCGTTATCATGCGCTTAAAGCAGAATAAGCGAGGATATCAAAGCCATGACAAAAGATATTAGTCGGTACAATATGCGTTGGGTTGAGGGGGACACTTTACCTGAAGCTCCAAAGCCCAAACTTTCTCCGAAAGAAAGGTATTTAAAGCAACTCCAAGAGAATCATCGACAATCTGAAGAAACGTGGTCTTATGTCCAAGCAAACGAAGACCGTTATGCATTACAAAGAGCGGATGTCCTTACTCGCCGAAATGCCTCACAAATGCTTGATGACTCTCTTCGTGACTCACTAAGTTCGCAGTGTTCACTTGAAGAAGAAATGGCAAAGAATCATCAACATGTTCTTATTGCAGACTTAGAAGATGCCCATAAAATCTTGCACAACATTTGGTTGGAGTCTGGTCGTGATGTTGCTGCCATTGCTGCGAGTATCAAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //