Array 1 71495-75145 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHVHU010000011.1 Membranicola marinus strain DP5N28-2 DP5N28-2_ctg011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 71495 30 100.0 35 .............................. CGAACTTTTCCCTGTCCAGTCGATCAAAAGATCCA 71560 30 100.0 36 .............................. TCGATTTCTATTGCTATCATGTGGGCAGGTATAGCC 71626 30 100.0 35 .............................. GATCCAGGATGCCGGGTGTAATCGCTTGTATTATT 71691 30 100.0 36 .............................. GACTTTATAAATTTGTCTGCCAATTTCAATTGGTAA 71757 30 100.0 35 .............................. TAGATTTTAGGGTTTAGATTTTTGTGGTATTTAAA 71822 30 100.0 34 .............................. ATTTAGAATATTTTCATTAACACCTGAAATTGAT 71886 30 100.0 35 .............................. TCGGAGTTATTGCCCTGATTTTGGGGCTAATCAAA 71951 30 100.0 35 .............................. CTTCGAACATGATGTCATTTATACGTTTCATGCCG 72016 30 100.0 36 .............................. TTAGCTACAATGGCCGGACATGGAATAGCAGCCGGA 72082 30 100.0 36 .............................. GTTACTAGAATGAAGTCCTGTTCAACGAATTGTTGT 72148 30 100.0 34 .............................. CAAAATAACTACCTTTCTTGATTCCGTGTTTTTC 72212 30 100.0 35 .............................. ACACTTAATGAATTAATCAAGGTCGCAAAGTACTT 72277 30 100.0 36 .............................. GGGTAACATCTTTTTTCAACCCCTGACTATGTCGGT 72343 30 100.0 35 .............................. TGTTTTCAGCCCAAATTTGATGCGTCGCTTTGAAA 72408 30 100.0 35 .............................. TTTGTCAAGAATATGAGCGCGACAATTTCGGGGAA 72473 30 100.0 36 .............................. TGTAGTAGCCGCTGTTCCTACTGACAGCCCGCACCC 72539 30 100.0 37 .............................. CGGCTAAATGTCGTACCTGTCCCCGTACTGGAATTAA 72606 30 100.0 35 .............................. ATGAATACCCATTGTTGAAGCTGAACCGCCCTATC 72671 30 100.0 35 .............................. ACCGAATCACAAATCTACAGATATCGGAGCCTGAA 72736 30 100.0 36 .............................. CAGGTGGAATAGAAAAAAGAACTTCGGATTAATGAA 72802 30 100.0 36 .............................. TTTTCTTCAATTCGGACACAAGGTCATCCACTTCAA 72868 30 100.0 36 .............................. CACTCCGTCACTATCTTCCTGCCATCCGCCTGTTGC 72934 30 100.0 37 .............................. GATCCACGCCGCTACGCTATCTAGATCGGACTTGTAA 73001 30 100.0 35 .............................. GAAGACCCGTGTAACGACTTCGAGGTAACGGTGTC 73066 30 100.0 37 .............................. TCAATGTGCCTGTGTTGTATTTATCAATGTCCCCCAA 73133 30 100.0 37 .............................. ACATCTGACGGAATAGTCAATGTAGAGAACGGCCCAG 73200 30 100.0 36 .............................. CGATCAATGCCCCCGGACCGGTCAATATAGAATGGT 73266 30 100.0 35 .............................. TTGCCGAGGGTGATTCTTTGACTTTCCAAACCAAA 73331 30 100.0 37 .............................. TGGATTCAGGCTTTGCGAACTTAGCCATCTGCCACTC 73398 30 100.0 35 .............................. CCGCATATTAAAGATCAGATCCTAAAACAGATCCT 73463 30 100.0 38 .............................. ACCCTTCTAATAAAGAAGTGTTAGAAGACCTGGTAAGA 73531 30 100.0 36 .............................. CTGATGACAGCCTATGGCTTCCAGATAGATTGCCAT 73597 30 100.0 36 .............................. TTTTTTACACTACAATAAACACCAATCCTTTGATGA 73663 30 100.0 37 .............................. GTTGATGATAGCGTCCTCTGTTTTGGCTTCCTGAAAC 73730 30 100.0 36 .............................. ACGCTTTGCAACCGCGGGTAAGACCTTCTGATCTGT 73796 30 100.0 38 .............................. CTTTATGAGCTTCTGAACTGAAATGTTCTCATAGGCTT 73864 30 100.0 36 .............................. TGATCTTAATTAATCAAAACAAGAAAAATGAGTGTA 73930 30 100.0 37 .............................. TGTTCTACAGCACTGCGGAAGCAAAGGACGGGAACGT 73997 30 100.0 36 .............................. GTATAAGGACAACGACTGGCTTCATGATACTATTCA 74063 30 100.0 35 .............................. ACACTTAATGAATTAATCAAGGTCGCAAAGTACTT 74128 30 100.0 36 .............................. GGGTAACATCTTTTTTCAACCCCTGACTATGTCGGT 74194 30 100.0 35 .............................. TGTTTTCAGCCCAAATTTGATGCGTCGCTTTGAAA 74259 30 100.0 36 .............................. CTGTTGTGACATTCAATATTGATTACGTTGGGTCTG 74325 30 96.7 36 ...A.......................... TGTCCTCTTCCCTATCACGTCAATTATATCTTCCCG 74391 30 100.0 36 .............................. TCACAGGCATCCGGGTGTTCGGTTTAGAATAGAGTT 74457 30 100.0 35 .............................. TTTGTCAAGAATATGAGCGCGACAATTTCGGGGAA 74522 30 100.0 36 .............................. GAGCACCGTACTTGACAACCAAACTAAATTGGCGTG 74588 30 100.0 36 .............................. TGTGCCATCCATCCATATACCACCCTTCCATATACC 74654 30 100.0 36 .............................. TGTAGTAGCCGCTGTTCCTACTGACAGCCCGCACCC 74720 30 100.0 35 .............................. TATTGGAAGCAAAGCTCGTTAGGCTTTTTTATCAA 74785 30 100.0 37 .............................. CGGCTAAATGTCGTACCTGTCCCCGTACTGGAATTAA 74852 30 100.0 36 .............................. GAAGATAGGTTAGGGTAAGATTCAATAGATAGCTTA 74918 30 100.0 35 .............................. ATGAATACCCATTGTTGAAGCTGAACCGCCCTATC 74983 30 100.0 35 .............................. ACGGAGCACGTCCGGTTGAGGTGAAGGAGATCAAG 75048 30 100.0 37 .............................. TTAATGAATCCGTCAACGTCAATGTCTGTCCGTCATC 75115 30 86.7 0 ........................C.GC.G | G [75139] ========== ====== ====== ====== ============================== ====================================== ================== 56 30 99.7 36 CTCTTAATCGCACCATACTGGAATTGAAAC # Left flank : GAATATAAACCTTTTAAAATCTGGTGGTAATGTATGTAATAGCTGTATATGATGTAAATACAAAACGAGTGGCAAAAATGCTGAAATTGAGCCGGAGATATTTAAATTGGATCCAGAATTCAGTATTTGAAGGGAATATCACCCCTGTCAAGCTGAAGGAGTATAAGATAAAGGCTCGGAAGATAATGAACGAAGACGAAGATAGTCTGATTATATTTCAATCCCGACATGAAGATTGGCTGGAAAAAGAGATCATAGGCATTGATAAAAACCCCCTTGATATTATACTTTGAAGTCGTCGCTGAAGATATGTAACACGCAAATATGGCCAGCTACTGAGCTTGTCATTTATAACAATTTGGTTACGTGTTAATTATCTACTTGTCGTACAAAGGATAAAAACATATGAATAAAGATAGACGCCAAAACCAGACAAAATGTTCTTTGAAATACTGGAATTAATGTTGAATGTGAGTACTTTAGCTCACGAAACTATACGG # Right flank : GATTTGACAGATCTCGAAGATCTGTTAAATCTCAAGCCGCATCCTTATATGTCTCAACTCGTATATAAATAATGTGGTGCCCATTATTTATTAGTTATCAAATTTTCTTCAAAGAAATGTTTGCGTTCAGTGGATGCGGTTGTTTCGACACTATGCCTCGTATTTCTCTTTTACATCGTCGATGCAGTTGACTCGATTGCTTTTTACTCTGTAAGTGATCCGCGCTGGTCGGACTACTGACATCCATTGATTTAGGTTGATTTCCAACTATGAACGGAGCTGGAGCTCCATTCTCCCGGGACACTCAAATCATCAACAATTGTACAATACCTCGGGGTTTGACATATCCAAAACTATGATTCGTTCCTGTGGTTCGCTATTCAGGTGCCAGACACTACCCACACCCGCAGGGCTTTTGCGGCAAGTGCCTGACACCACAAACGCCGTGATCCTCTGTGAAGCCACGCTCTGGTTAATGCCCGCTATACAGATGCCAGATA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTAATCGCACCATACTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 128608-122724 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHVHU010000017.1 Membranicola marinus strain DP5N28-2 DP5N28-2_ctg017, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 128607 36 100.0 36 .................................... GCATCTTAATATACTGCTTCCGTCTAATCCTGCGGA 128535 36 100.0 36 .................................... CAAAAGCATTAAAGATGAGAACTATTAAAGCAGGTA 128463 36 100.0 35 .................................... CACCTGGGTAGCAGTAAGTCAATATATCTTATTCC 128392 36 100.0 38 .................................... GCCTCAAACGATCTTTGAGGAAACCACTATGTATAAAG 128318 36 100.0 36 .................................... CAAAAGCATTAAAGATGAGAACTATTAAAGCAGGTA 128246 36 100.0 35 .................................... TCTTTAATCTTTGTCATAACAATACCAGTTATTTA 128175 36 100.0 39 .................................... AAAACAGACTACAGCGAAATTAAGGACATAACTCCAGAG 128100 36 100.0 37 .................................... CCTACCTTTGTCATGTTCAACTTTGGGACAATACCAA 128027 36 100.0 37 .................................... TTAGAACAGTTGAAAATACAGAGTTGGGTTATAGGAG 127954 36 100.0 38 .................................... AAACCAACATCATGAACACAGTAGAACAAATTTCACAA 127880 36 100.0 35 .................................... GAACTGGATTAAGACAAACGAACAGGCCAAAAATC 127809 36 97.2 35 ..................T................. TTAACGCGTGAAGGGTTTATCTGGGCTAAAAATAA 127738 36 97.2 37 ..................T................. AGATGGAAAACAAATCTCAGTGCCGGTAAAACTAGAC 127665 36 97.2 38 ..................T................. CTTTTTCCAACAATGCTAACTACCTTTCTCACAAAGTT 127591 36 100.0 36 .................................... ACCTTAAAAGCAAAAGGAGGCATTGACTACATGTAT 127519 36 97.2 34 ..................T................. TTCCATATCCTATTGATGGCCCGTAACAACAAGG 127449 36 97.2 37 ..................T................. TGACGAAATATATCCTTATGACAATGAGCATCTTAGC 127376 36 97.2 36 ..................T................. ATCTTACTATGCTATCTAGTGTATTGTCTATGCTAT 127304 36 97.2 36 ..................T................. AAAACAACGCTAAAGTATCAGCTCTAAAAACAATTA 127232 36 97.2 37 ..................T................. AAAAAAAAGAGAACACATATAACGAAATACTCGAGGA 127159 36 97.2 34 ..................T................. GGAAGGATTAGAGGCTTCTGAAGAACAAATTGAG 127089 36 97.2 37 ..................T................. TGCAAGAGAGCGTATTTTTGAACTGCAAGATCACAAC 127016 36 97.2 35 ..................T................. TTCAGGAGGAGGACAAAGAGTAATAGAAAACTACA 126945 36 97.2 36 ..................T................. CGCACGTTGTGGACGCAATAGCAACTTTAAAGAAGC 126873 36 97.2 36 ..................T................. AAAACAACGCTAAAGTATCAGCTCTAAAAACAATTA 126801 36 97.2 37 ..................T................. AAAAAAAAGAGAACACATATAACGAAATACTCGAGGA 126728 36 97.2 34 ..................T................. GGAAGGATTAGAGGCTTCTGAAGAACAAATTGAG 126658 36 97.2 37 ..................T................. TGCAAGAGAGCGTATTTTTGAACTGCAAGATCACAAC 126585 36 97.2 35 ..................T................. TTCAGGAGGAGGACAAAGAGTAATAGAAAACTACA 126514 36 97.2 36 ..................T................. CGCACGTTGTGGACGCAATAGCAACTTTAAAGAAGC 126442 36 100.0 35 .................................... TGGATAGGTTCTTTGGGTCGCTGAACTGGTCGTTT 126371 36 100.0 37 .................................... ATTTTGAAAATACTGAAACAGATTGCACAATGAGAAA 126298 36 100.0 37 .................................... AAGCAGATCATCGAGGTTACTTTTGGGGAAATTGACT 126225 36 100.0 38 .................................... TACTGTGAGATAAACGTTTCAGACGTACTGTTCCGCCA 126151 36 100.0 37 .................................... ATGCACGTGAAAAAAGCAATGAATCAGGCAATTTCTG 126078 36 100.0 39 .................................... CGGATGTTCAGCTATTGTAACAGCCGGAAACAACAAGGG 126003 36 100.0 35 .................................... ATTGTGAGATAGACGTTTCAGACGTACTATATCAC 125932 36 100.0 37 .................................... GGTACATTGAAATTTTCCAACGGGTGTAAAATTTACT 125859 36 100.0 38 .................................... GGTTCTAAATCATTCCGTGATATGATATTTGCGGTAAA 125785 36 100.0 33 .................................... GAAGCCATAAACCTGTACGTGGGGAATGGTTCT 125716 36 100.0 36 .................................... AATACGAATGGCAGCTGAAAGCGTATCTATGGATGT 125644 36 100.0 36 .................................... ACACGCTTTCTTTTGCTGACGTGGTCGAAGCACTTG 125572 36 100.0 36 .................................... AGATTAAAACACACACATTATGAAAGGTTTTACAAA 125500 36 100.0 38 .................................... ATCGGAAGTAATTAGCTGTATGGGTGCGGTTAAAGATT 125426 36 100.0 36 .................................... ATTTGAGACAGCTGTTAAAATGGTAGGATTTGAATA 125354 36 100.0 38 .................................... AGATTGGTTTTATTCTTTTGATTTTTTAACCCGCTCAA 125280 36 100.0 34 .................................... ATATTTTTCAAAATTTGATGTTTGCTTTAATTAT 125210 36 100.0 37 .................................... AATCTTGGCGCAAACCATGGAACGGTAAAAGCTAAAT 125137 36 100.0 37 .................................... TCGTTCTATTCATCGTATGTCAGGCCTATTACTTGTT 125064 36 100.0 35 .................................... ATGGGAATCGCATCGGTATCGGAGCCAAAAATTAC 124993 36 100.0 37 .................................... AACTACAAATTAAAATCGAAAACAGCAAACTTGATCC 124920 36 100.0 37 .................................... ACTACTGTCATGGCCATAGCATTGATATTGATGATAT 124847 36 100.0 36 .................................... AATTAAAATCGAAAACAGCAAAATTGATCCTGACCA 124775 36 100.0 37 .................................... ACGAAATCACTACGACACTACCGAGAGCTAAAAAAGA 124702 36 100.0 35 .................................... ATTGAAAAAACCTTGCTGGGGATGCTTTCAGAGCA 124631 36 100.0 39 .................................... GACTTCCAAACATGATCCCCCCCTCCCGGAAACCCCCAA 124556 36 100.0 37 .................................... TGACACTGAGATACACGTATTCAAAGTAAAATAATTT 124483 36 100.0 35 .................................... ACGGTGTTGTTTGTTCCTGATCCCACCGTATGCGT 124412 36 100.0 37 .................................... ACGCCAACAACGCAAAATATCTGGATGTCGGACTGAT 124339 36 100.0 37 .................................... AAAAGAAGATTGAACTTGCCCTTGAAATGATGCAAAG 124266 36 100.0 36 .................................... AAAAATATTCAATTCGAAGAAAAATGGAAATACCAA 124194 36 100.0 36 .................................... GGAGAACCTGCTAAGTGGTTAACAGACTTCACCTTC 124122 36 100.0 37 .................................... GTTAGAAACGTTAAGTTAATAAAAGTAGAATTTAAAG 124049 36 100.0 37 .................................... AAGGAGTTTTTAAAAAACACGAGTCTACCTTACTTGG 123976 36 100.0 34 .................................... ACGTCAAATATAGATTTAAGTCACTATGTCACGT 123906 36 100.0 36 .................................... CAATGTAGTGTATATATTGAGATAGATAAGGATTAC 123834 36 100.0 34 .................................... ACTACTTTTGTTACGAACCTGTATGTATGGTTAC 123764 36 100.0 36 .................................... CGCAGGTGGAAACACTGAAACAAGGTGCTTACGGTT 123692 36 100.0 36 .................................... AAGGCTATGTTTTATTTACTGCTCAAAGATTAGGAT 123620 36 100.0 37 .................................... TGTGGGGTGCTATGAAGGCTAAAGTAGATGAGCTGGT 123547 36 100.0 36 .................................... TTTTTGATATGAACTCAGGAAATGATTTTGTAGAGA 123475 36 100.0 35 .................................... CCGCCGCTGCAACGGCACAAAACTTAGAATTATGT 123404 36 100.0 36 .................................... ACGAAACGATAGCTCCTTATAGGCGAAGTATCAAAA 123332 36 100.0 37 .................................... CCTTATAAACTCTTATATTATGAAATTATTTGAAATT 123259 36 100.0 35 .................................... ATAACAAAACTATGCGAATAAGATTAAGCGTCCGA 123188 36 100.0 35 .................................... AGCATGACCAAAACATTTGAAGTAAAGAATTTGCC 123117 36 100.0 35 .................................... ATAGCGTCGGTTTTAATCAATAACGTTTTTTCCTT 123046 36 100.0 35 .................................... ATGACTTCAGGGAACGATATGATAATACTAGAGGT 122975 36 100.0 37 .................................... GATGAGTTCAAAAGAACGAAACGGATAACCAATGCAA 122902 36 100.0 35 .................................... ATTATTAACCGTTATAACTGCATCTTCGATATAGA 122831 36 100.0 36 .................................... CAGGACAGTCACAAAATACAGAGTTGGGTTATGAGT 122759 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 82 36 99.4 36 GTCTCAATCCTATTCTTACTGGTACTCGGTTCGGTC # Left flank : GCAAGTTCATCCTTGTCTGCAATCTGATTGACCAATTCATCGAGTAATTTTTGAGTTTGATCTTTCATAGTATAAAGTTTTTAGACTCACAAAATCAGATCAATTCCGCTCAACACAAATTTTTTTGGAAAGTCTTCTTGAACTCCACAAATACACAAACTACTTGACAGTCCCTGGTACTCGGTTCGGTCATTAATGGTAAAATTGAATTATCTGCGAAAGACAT # Right flank : ATCAAAAATATGTAAATTTCTATATTTCAAAGAACTATCTGCAGTCAAATAAACAAAGTATGCTGATGCGGTCGTGTCACCTCCACCGCCATATCCATACCGATAAAGTTCATCCGGTTACAGATCTCCCGGTTCACCGGAAGTATAAATATACTATCCTGTGGATCCAATATAGAATTGATCTGTTGAAGCGTTTTCTTGATCTCGTTGAATATTCGACTCGAAGACTGACCAAAATAAACCGATTTTTGCAGCCTGGTCATCCCCTTCTGCAGTAAATAATTCATAACTTGGGTTCGCACTCGGTTGTTTGAAATGTCATAACTGACAAAATAGGGTGTCATACTTATATCGCTTTGACTTAGTTGATCAATGATTTTAGCAAATTGCCGGACCCGCTCTTCCAACTGATCCAGTTCATCCGGGATCATCAATTCTTTTTCCTCACCCAGAAGCATTCCATCTGCAAAAATATTATTATACTTTTTCCACATCACAGA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAATCCTATTCTTACTGGTACTCGGTTCGGTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //