Array 1 1633012-1633774 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOAE020000001.1 Lactobacillus paragasseri strain UBLG-36 H5J37_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1633012 36 100.0 30 .................................... TCTTCATCTGCACTTTTCTTCTTCGGGAAA 1633078 36 100.0 30 .................................... ATATCAACCTTTGGAGCACTAGGAAAATAA 1633144 36 100.0 30 .................................... TGTTTAAAGCTTGCAAAACGTCAATTTTTG 1633210 36 100.0 30 .................................... TTGTCTCAATAACTAATTTATTATAAAAAG 1633276 36 100.0 30 .................................... TAACTCTTAACGCTGTAGCAAAACTATCAG 1633342 36 100.0 30 .................................... GCAAGATTGAACGAATCAGACGCTCAATTG 1633408 36 100.0 30 .................................... TGTCTTCCAAGTTGCAAATAACTAGTACAT 1633474 36 100.0 30 .................................... CTATCAAGCAATCAACTGTTAAGCAATTAA 1633540 36 100.0 30 .................................... TTCAATGATTACCTATTACAAGAAGACGAT 1633606 36 100.0 30 .................................... TATCGCATTATTCATCGTATCCATACCCGT 1633672 36 100.0 30 .................................... TATCGTCGGTACGAGTTGTAATGCTGAATA 1633738 35 91.7 0 ..........................A.A....-.. | TT [1633766] ========== ====== ====== ====== ==================================== ============================== ================== 12 36 99.3 30 GTTTTAGATGGTTGTTAGATCAATAAGGCTTAGATC # Left flank : AATCAAAATATTTTTGACAAGTATATGCCCGTAATTATAAAAGAATACATTGAAGTGCTTAATGAAGCAGATCGTAATGAAATATTAAAAACGTACCATAAACTAGAAGGGATAATTCAAGATTCGTTGCTACTTGAAGATCTACCATTAGAACTTGAATTTAATGAAGACTTGAAGAAATTTTTAAAGTTAGAAAATCTACATTTAGATACTAAGTTTTTAGAAGAACCATATGCTATAATTGAATCGATCTTAAAAATACATCAAAATTATAATCTCCATTCTATACCTGTTGCTTGTAATGTAGCTCATTACTTAAATTTAGCTCAGGTAGGGATGTTAAATGATCTGTTAAAAGAAATGAAGTTGAAATTAATTTTAATAGAATTCACATCTGCGGATTTTCTGTTTTTTCCAAAAGATGTTGATTATTTCTACATTGATCAAGATCTTGTTGATTGGTACTAACTATCTGATTAAAAACTGATTATAAAATTTCG # Right flank : CGTAATTACACTACTGGTCCATTGCTTTTGCAATGTGCCTTTTTTATTATCTTCCAAACCGTTTTTCACCCTACAGTGCAAAAGTCTATTTTAAATGTAAGTGCCTATTTTATACCATATAAGTGTCAAGAAAAATAATATTAATGGATAATTTAAAAATGACTAAGAATGTTTTTTTGGTATGTGGTTCAGGTGCAGCATCAGATTTTATGGCTGCTCACATGAGAAAAACATCAAAGAAAGTTGGTTTAGATTATAAAATTCAAGTTCGCAGCGAAGCAGAATTAGGTGACTATGCAGATCAAATTGCTGCCTTAATGTTGGGTTTCTTACTTAAAGACGGAGTTTGGTGCGATTAAATTACAAGTACTTGACAAGGTAAAGTAATTTTAATGAAACTAGATTACTATTCAATTTCCATTTAATTTTATGGATTACATGAAATTAGACAAGCAAAGAATCATCGCGGATCTTTTCCTCAGGGCGCGGTATGTTTATTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAGATCAATAAGGCTTAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //