Array 1 40001-43379 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZCZ01000091.1 Prevotella copri strain iK2152 NODE_20_length_51115_cov_27.8052_ID_39, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 40001 33 97.0 32 ................................C ACGGCTCGTCTAGAGCGAGAGCGGATTTTAGA 40066 33 97.0 32 ................................C GCTCTTGGCTTATCATAAGATTTGCAATGACC 40131 33 97.0 32 ................................A CTCAATCTTATTGGGAGCAAAGGACAAATCAG 40196 33 97.0 33 ................................C AAAATGGTGGTGAGCCGGAGATTAAGGCCATTG 40262 33 97.0 32 ................................C GGTCAGTCCACGCGCATATACTCTCCACAGTT 40327 33 97.0 34 ................................G TGGTGTCTATCGCTACAACGTCACACCCCGCAGT 40394 33 97.0 33 ................................A AGTGTCGGGCATCTATTCTCTATCCTATCTTTG 40460 33 97.0 33 ................................A TTGTCGAGGTAAACAATGTGCAGTATGTTGTTA 40526 33 100.0 33 ................................. TCCAGATGGCATAATGCTTGTTGAACAGTTCGA 40592 33 100.0 35 ................................. CTATTTTGCAGATATATTCCTGAGCGTTTTCTTTA 40660 33 100.0 32 ................................. AATATCATCATACCATAGTATAGGAACGACAG 40725 33 97.0 33 ................................C CAAGATACAGGGGATGTTGTCATCGAAACTACT 40791 33 97.0 33 ................................G TCTCATTAGTTTTGTCAGTATTATGTTTACCGA 40857 33 100.0 33 ................................. GCATACCTAGGAGAATATCCATAAGTAAGAGAC 40923 33 100.0 34 ................................. ATCAATACCAACACGAGAATAATCAAGCTGAGGG 40990 33 100.0 33 ................................. GCTCTTGCATAATCTTATAGTTCGTCTCATTAG 41056 33 93.9 18 .............................T.T. GTAAAGACTAAAAGCCTT CA [41082] Deletion [41107] 41109 33 97.0 33 ................................A TCATACGAAAAGGAGCACCGCCAATAGCGGCAG 41175 33 97.0 33 ................................A TATCCATATTTGAATTTGGCTGCAAATAATCAA 41241 33 97.0 33 ................................C TGAGCATAATTAAGAGCAGCCATAGCATAAGCA 41307 33 97.0 32 ................................C CAGATGCATTTGAATTATGCTCAAGCCAAAAA 41372 33 100.0 33 ................................. CAATCTGACGTTGAACATCAACGAGACCAGCCA 41438 33 97.0 33 ................................G ATTCCGATGAGTTGGCACAAGATTTGGAACGCT 41504 33 97.0 34 ................................A TAAAAAATCTTATCAGCAACAGCATCAACAGTCT 41571 33 97.0 34 ................................A GTACGCATAATCTCAGTTTGTACTTGAGACTGAA 41638 33 97.0 32 ................................C ACTTATCGTAATCATACTGCTTTTGCTCCTGC 41703 33 97.0 34 ................................A CCAATAGGAGAGATATAAGCAGCACAATCGTTAT 41770 33 100.0 32 ................................. GCAAGGCAGTAGCCTGACGCAAAGCAAGGACA 41835 33 100.0 32 ................................. TATTCCGCTTTGCATTTTTACGTTAATACTCT 41900 33 97.0 33 ................................A GCCTTAAATTGCTCTTGTAACAGTCTATTCTGA 41966 33 97.0 33 ................................A TCGCATTAGTTTTATCAGTATTATGTTTACCGA 42032 33 100.0 32 ................................. CCTAGATATGCGGAATTGAAAAGTGCTCGTGA 42097 33 100.0 32 ................................. TTAATCTCTCGCAAAGTTTGTGCATCAACACG 42162 33 100.0 33 ................................. CTTGAGACTTTTGAAGAGAAACAGAAGCATCAA 42228 33 100.0 32 ................................. GAAAGTTAGTGTTAACCTGTGGATTTATGCTA 42293 33 97.0 32 ................................A CAGAAGCATCAGTAGTAAGATTACCACTAAAA 42358 33 97.0 33 ................................A TATTATCACTAGGACCCAAATAATCAATGTTAC 42424 33 97.0 34 ................................A ACCAAGAAGCCAAATCAATGTATGAAATATAAGG 42491 33 100.0 33 ................................. TTGCGTTGATTACGAATCCTTGCGGCATACCTA 42557 33 100.0 32 ................................. TCTTGCTAGTCATAATTCTTAACAATTAAAAA 42622 33 100.0 33 ................................. TTGAACTTCTTTATCCATTCCTTTTGACTTCTA 42688 33 97.0 33 ................................C TTTCTACTTTCAGACCTTATACAACGTACAGCA 42754 33 100.0 33 ................................. CTAGCGTATCACGAACAAAAAGATGAAATGGAT 42820 33 97.0 34 ................................A GATAAGTATTGGTTTGATGTACGTTATCCTGGAA 42887 33 97.0 33 ................................A GTCTTTGAAAAGCTAGCGAGTGTTGGCAGAAAT 42953 33 97.0 33 ................................A GCCATTAACGGAAGAGAAGTAGACAATAATGAT 43019 33 100.0 33 ................................. TCCTCGCAAGCGATATAGATAATCTGCTTGAAA 43085 33 100.0 33 ................................. GAAATCGTTTGTTGAGACTAGAAAACAAAGAGG 43151 33 97.0 32 ................................C AGACATAATAGTCATTGTGTACATCTTATGCC 43216 33 97.0 33 ................................C ACTGTGCCACACCCTTCCGCATATTGGCGTGTA 43282 33 97.0 32 ................................A AGTTGCTCAACACCGATTTTAATTGAACGCTC 43347 33 93.9 0 .........................A......A | ========== ====== ====== ====== ================================= =================================== ================== 52 33 98.0 33 GTCACACCCTTCGTGGGTGTGTGGATTGAAACT # Left flank : TGATGATTATCCAGTATTTTTAATCAAGTAGTGTATGTTTGTATTGATTACTTATGATGTAAACATTACCTCGGCTCATGGTGCGAAACGTTTACGCAATGTAGCAAGGGCGTGTTTGAATTACGGAAAGAGAGTTCAAAACTCTGTTTTTGAGTGTATTTTGACGGAATCTCAGTTTTTCGTATTGAGGGACCAGTTAAAAGGGATTATTGATACTGAACAAGATAGTATTAGGTTCTATATTCTTGGGAAAAATTGGAAACGTAAAGTTGAGACTTTGGGTAAGGATATGGGGCTTGACTTTACTGGTGAGCTTATCATTTAATGTATGAGGGTGCGAACCTATAGTATTGCAAAATAACCTATAGTTTCGCACCTTCTTAAAATCAGTGACTTACAAATATTATGCCTTTTATAATATTTTACGTGTAATTATTTTGCCATCTTTCGCAAAATAATTATCTTTGCATCATGATATTCAGCTATTTGCTGAATATGCA # Right flank : AGAAAACAGATTTTATTTTCTGAGCCCACTTGAAAAAGTCATTTTTACGAAAACGTGCCATTGATTGTCAATAAGTTACAATGACAAAAAATATGATTCGGGACTTCTTTAAGTGGACTCAGTTTAGTATTATACAGCAATCTCTAGTTATAAGTGTTCAGAATGTGTCTCCTCCAGCCACAGCATTTGACTCCTTCGGTCACCGCATTCGACTCCTCCAGCCACCGCATTCGACTCCTTCAGCAATCGCATTCGTCTCCTTCGGTCACTGCATTCGACTCCTTCAGCCATCGCATTCGTCTCCTTCAGCCACAGCATTCGACTCCTTCAGCCACCGCAGCCGTATGTGTCAACTCAATGAAGTAGATGAAGTCGTGAAATGAAGTGGATGAGTTCGCATAATGAAGTTCATGATTTCGGCACAATTGTCAATACATGCAAATGGTAAAGCAAAAAGTGGTTTACTCCTACCTTTATGATTCTTATACGAAAATGTTTTT # Questionable array : NO Score: 5.63 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTTCGTGGGTGTGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //