Array 1 1079-99 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFWW01000055.1 Lentzea terrae strain NEAU-LZS 42 C1003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 1078 37 100.0 35 ..................................... GACGACTTCCGGCTGCAGTGGCTCAACGAGTCCTC 1006 37 100.0 35 ..................................... CCGTTCTGCCTGGCCACAAGCTCGCAGTACTCGTA 934 37 100.0 34 ..................................... TTCGAGTCCAAGGACGACATGCTGGCCAGCGGGA 863 37 100.0 36 ..................................... GCGATGTACGCGCTGGAGAGGGCGGAGCGGTGACGG 790 37 100.0 36 ..................................... TCGCAGGGACAGGCACTCCTCACGGTCGACGAGGAC 717 37 100.0 35 ..................................... TCGCCGTCGAAAGCGGTGCCGCTGGTGACGCCCTG 645 37 100.0 35 ..................................... CCGGAGACGGTCGAGCACGGTGTCGAGCGCCTTGC 573 37 100.0 38 ..................................... CTGAACTCGTTGAACTTCTCGGACAGCGCGCCCTCGGC 498 37 100.0 36 ..................................... CCCTTCAACACCCTCCATCGGAAAGGTACCGCCATG 425 37 100.0 36 ..................................... CTTCCGGTCATCTGACTGCTGTGTGCAGCCCACGGT 352 37 100.0 36 ..................................... CCCGACTTCACCACCCACTACGGCCGCCGCAGCTAC 279 37 100.0 35 ..................................... TGACTTGCCGAAGACGACGTCTGCTGCGCGGTCGG 207 37 100.0 35 ..................................... TCGATCAGGGCCGGACGTGACGCCTCGAGCGAGGC 135 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 14 37 100.0 36 GAAGCGCTGGGCGTCCGCGCCCAGCGAGGATCGCAAC # Left flank : CGGGTCCATCGACGGATACCTGCCCTGGACGGTGACCTGATGGAACTGTTGATCACCTACGATGTCGACACTACGAGCCCTGAAGGGCAGCGACGGCTGCGTCGGGTCGCCAAGGCGTGCGAAGGAATCGGACATCGCGTGCAGAAATCGGTGTTCGAGGTCGTCTGCGATCCAGGGCAACGACTTCGGCTTGAGGCCGACCTGGTTAACATCATCGACCCTTGTGTCGACTCCGTCCGCATCTACCAGCTCAACAGAGGCACCTTCGCTGCCGCAAGACATCTTGGTGCTGCGGTCGCTCCACCGCACCACGGCGCTTTGATCATCTGATCGTGGCATCTGCCGGCACGTGAAGCCAGAAGGTCGGTCTGGTTGGGAACCCCTAGCGTCGTGCAACACGCCTGGAGGTTCCGAACCAATTTCTCGGTGTGTCCGGTCTGAGCTGACCTCGCAGAGTCATGCTGGCGTGTACGCATAAGGATCTCGCCTGTTCATCCAGG # Right flank : CCGAACCCCGGCTGAGGTTCACCCCAGGCAGTGGACACCGAGTTAGCAGGACCAGCGGTTCTGCTGAAAGGATGTCCTCATGCCTCCTCGGAAGCGCCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGCGCTGGGCGTCCGCGCCCAGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-16.60,-16.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 2 9984-9008 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFWW01000055.1 Lentzea terrae strain NEAU-LZS 42 C1003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 9983 37 100.0 36 ..................................... CACAGCGCCCGCAGGTACACGCCGCCGTGGCCGGCG 9910 37 100.0 34 ..................................... CACCCCTTCGACGGGGAAGACGTCGGCGTCCCTC 9839 37 100.0 35 ..................................... AGCGTGGTGTCGCCGATCGCCGCCGCGACGCTGAG 9767 37 100.0 36 ..................................... CGCGGCGGTGAGGCCGAGCATGTCGAGGAGCTGCGC 9694 37 100.0 34 ..................................... TGGCGGTCCAAGCGCGCCGCGACACGCTCGGCGA 9623 37 100.0 36 ..................................... GTGCAGCACCGCGACACCGGCACCGTGCACGTGGTC 9550 37 100.0 36 ..................................... CAGTACCCGGACGACACATTCCCCACCGGGACCGTC 9477 37 97.3 35 ............................T........ AACGACACGAACAACAAGCCGATTCTTGGCCCGAT 9405 37 100.0 35 ..................................... TTCCACATGTGATTGACCGCGACCTTGAGCGCCCA 9333 37 97.3 36 ............................T........ AAGCAGTACGGCACGCTCGCCGCCCGCGAGCTCGGT 9260 37 94.6 34 ..............A..T................... CCGCGCCAGTACGATGCTGCGGCCACGATCCGCG 9189 37 94.6 35 ...........T..........G.............. TCCAGATAGGCAGGCGGCAACTCGCCGGGACTGGT 9117 37 94.6 36 .T....................G.............. GACCACGACCGCGAGCCAGAGGGCTCCGCCTACCGG 9044 37 86.5 0 C......C.G.....T......G.............. | ========== ====== ====== ====== ===================================== ==================================== ================== 14 37 97.5 35 GCAGCGCTGAGCGTCCGCGCTCAGCGAGGATCGCAAC # Left flank : CGCGTAGCCACGCCTATGAGTTGATCGCGCGTGGAGCGTTTCCGGCGAAGGTGATCCGGGTCGGCACTCGTTATAAGGTGATCACTGCCTCGATCGTTCAGGCGTTGTCTGCGGAAACGACCTGACGTAGCCGGCCATACCCTCGTGGACGCGGAACTGTGGCGAGTATCAGGTTCCATGCTCGTGGCGGGCAACATGAAGGAAGAGACTGGGGCATGTCGCTGCAGGTCAAATGGTGCGTCTGATGGTGTGCGAGGATCCGCCCGGCTGGTGGCTCCGCGGGCGATCTTGGCTCGATCAGGGCGGCGGTCGTGGGATGCGTCCGAGGGCTGTGCGCAGGTTCATGCCGCAGTGGCGAGCCGTCGGGCTCGGCTAGGGACCTCGTGCGTCGTGCGACACGCCGGTGGGTTCCCAATTGCCGAGCTGGCGTGTCGTTGGTGTTTGGGCCGTGGCATCGTTGTCTGGGTAGCTCGTTGTGTAATTGGCCCTGTTCGTCTAGG # Right flank : TTGGTCCTCAACAAGATCACCGCCACGTGCCAGGGCACCATCCCGGCCTCCGAGCTGAGCGGGGGTCGCAACTGTGTTCGCCTGGTCTAGGCGTTGGAGAGCGTGGTGTGCCGGTTTATGTCATCCGGAACACCGCGATCGCGTTGACCTGCTTCGTTGGTCCATTCGGGTGTAGATGTCACGTGGTGGAGCTGAGAGGCCCGTTTTTGTCAGGGGGCGTCTCTATGGTCACGTCGTTCGTCGGGGGACGGGCGATTTGAAGGGGTTTGCTTGTGTGGGCGCATAGCCCCAGCAAGGTAACCGGGCGTTGGCATCCGTTGGCTGATCATCTTCGATCGACAGCGGGGCTGGCTCGCGAGTTCGCGGCTGTGTTCGGCGCGGGCGATCTTGCGGCGGCGCTGGGTTTGGTGCACGACGCTGGAAAGGCGGCGTGTGCGTGGCAGGCCAAGCTGGTCAAGGTGAGTGCGACCGGCGACAGGGTGAACATCAACCACAAGAAC # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCGCTGAGCGTCCGCGCTCAGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-14.50,-14.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 1 114-1449 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFWW01000031.1 Lentzea terrae strain NEAU-LZS 42 scaffold33, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 114 37 100.0 35 ..................................... TGGCCATGGCGCTGCGCATCGCCGGTGCCGGTAAC 186 37 100.0 35 ..................................... GCGAACTCGGCTGCGCTGCCGACCGACCCGCACAC 258 37 100.0 37 ..................................... CTGTACCTCGCGTCGCGCGGCCCAAGTCCCTGCGAAG 332 37 100.0 37 ..................................... TTCGACCCGCAGGGCAGTGGGGTTATCCGCTACCAGC 406 37 100.0 37 ..................................... TTCGACCCGCAGGGCAGTGGGGTTATCCGCTACCAGC 480 37 100.0 34 ..................................... GTGAACGCCTGGCACTACGTGGGCGACGATCTGC 551 37 100.0 35 ..................................... ACCGGTGCCGGCAACCAGTTCTGGAGGCTCACCGA 623 37 100.0 35 ..................................... GAGTACGGGGCGAACCTTGTCGAATACACGTGGCC 695 37 100.0 35 ..................................... GAGAACCCGCCGGTGGTCACGGTGACCACACGCAG 767 37 100.0 35 ..................................... GACAACATGGGCCACGGGCCCGCGTCGTACGGCAG 839 37 97.3 36 ....................T................ GAGGACTGGGAGACCGGCGAGCGCACCGAGGAGCCC 912 37 100.0 35 ..................................... GACGTCACCATTCGTCTTTCCGCGAACGCGACGGT 984 37 91.9 36 ......................CA..G.......... GACGAGTACACGTGGGAGGAAGGCGCCTGGTGGGCG 1057 37 91.9 34 ......T.........T...T................ TGGATCATGCCGGGACTTGGCGAAGCGTGGAACG 1128 37 91.9 35 TG.......................C........... GACTGGGAGACGACGGAGCTGACGAAGGATGCCAA C [1145] 1201 37 70.3 28 .C......C..T..GT.TATT.G.............T AGCGCGGACACTACGTCGACGGCGTACA 1266 37 70.3 38 .C....TC.ATT..T....TT.GA............. CAGCCCAGCAGGAACGTCTACGGGTCCGGATCGGGGGA 1341 37 89.2 35 A.....TC...............C............. CCCGCCACCGAACACGAGACCGCCGACATCGAGCA 1413 37 97.3 0 ......................G.............. | ========== ====== ====== ====== ===================================== ====================================== ================== 19 37 94.7 35 GAAGCGCTGGGCGTCCGCGCCCAGCGAGGATCGCAAC # Left flank : TGCTCAGTCCCGACGACTATGAGAAGTCACTCCGAGCGGCTGCCTGAACTTCTTAAGCCCCTGTCCACCGTTCGGGGTGAACCTCAGGCACCAGCGGCGGCGCGACCCTCACCG # Right flank : CTCCGGCCTCAAACGGTTGCCGATCAACGCCCAGCGCTTCACCCGTGAGCAGAACGTCACGCCTGAGCAGATCTGGTTGCGATCCTCGCCGAGCGCGGACGCACGGCGCTGCACAGGCGGTCGAGACCTACCGGCTCAACCGGGGTGTTGCGATCCTCACCGAGCGCGGATGCCTGGCGCTGCACTGGACGAACGGGGCCAATTACACAACGTGCTCATCCAAATTACGATGCCATGGCCAACCCAGCGACACGCCAGCGCATCAGCTCGGAACATTCCGGCGTGTCGTACGACGCATTAGGTTCCGATGAGAGGCCGACGATTCGCCAGCGGCGGAATGAGCCTGCACGGTCCCAACCGGGCCCCACCACCACGGTCATGATCGCCACCACTGCACGACTTACCAGGTCGCCAGGCGATCAACGCTGTGGCAGCGATTTCTAACGCTGCCAACGAGTACTGGATGTCGGGTGCAGGCTGGCACTCGATGTGGCACATTC # Questionable array : NO Score: 3.00 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGCGCTGGGCGTCCGCGCCCAGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-16.90,-16.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-37] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //