Array 1 210163-206023 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANOK01000005.1 Calidifontibacillus oryziterrae strain ZYK contig4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 210162 37 100.0 35 ..................................... TATACACCAAATTTTGAGTTAGATTTCAGTTTTTT 210090 37 100.0 36 ..................................... TTACTATCTCACCATTTTTTAAATAAGTGATTTTAT 210017 37 100.0 36 ..................................... TTATAAAGAAGAGATAGGTTCATTCAACTTCTATAC 209944 37 100.0 36 ..................................... ATATTTATCACTACTTTACAAATAATAATCACACCT 209871 37 100.0 37 ..................................... ATAACACCTATGTATATTCCAAATCCTAATTTTGATC 209797 37 100.0 36 ..................................... CCTAAATGAATTTTATTTGCACATGCGTCCTCGCAA 209724 37 100.0 36 ..................................... GCAGTAGAACGAGCAATTATACCATTGGCAGAAAAA 209651 37 100.0 35 ..................................... CTCCTACTAAGATGTCCTCATACATTACTTTTACC 209579 37 100.0 35 ..................................... GTTTAACATATTTAAGTATGCTTGTTGTGTTTCTA 209507 37 100.0 36 ..................................... ATGTAAGAGCATGTCCTGCGTCGTCATATGTGCCTA 209434 37 100.0 36 ..................................... AATAATGCAATATCACAACTAAGCACACGTATTTCA 209361 37 100.0 36 ..................................... GTAACAATATGCAAACAATTATTCGTTAATCGAACT 209288 37 100.0 36 ..................................... TTCAGTCATTCCGATTACGAAAGCATATATCCATTG 209215 37 100.0 36 ..................................... TAATTTCTGCAACTTGCCCATTTACAATTGACACAT 209142 37 100.0 38 ..................................... ACGATTACAAGAGAAACCATTAAGGGAATATCTTGAGC 209067 37 100.0 36 ..................................... CACCTGCTGAACTGTTTTGATTTATGTTCTAAATCC 208994 37 100.0 36 ..................................... TGAGAAGTATCGTGTATTTGTTTGTCCTGAAATACT 208921 37 100.0 36 ..................................... CCCAATTGGTACCGTCAAAAATGTAAACAGTCCGAG 208848 37 100.0 38 ..................................... AAATAGACCGTTATTCCATCGGTTCGACCGAACGAATT 208773 37 100.0 35 ..................................... GAATAGGAGTTGATATTATGGGAGCGTTTTTTATA 208701 37 100.0 36 ..................................... GTGTTCGGGGACATAGACATTTTTTAACAGAATATT 208628 37 100.0 36 ..................................... AGAGAATGTCCATCGCCGGCGATAACTTTCTATATC 208555 37 100.0 35 ..................................... AATTATTCCCGATAGCCAAGTTTTCAACTTTGGAG 208483 37 100.0 36 ..................................... AATGTATTGTAGCTTGAGCCAAATTCGTGGAATCTA 208410 37 100.0 36 ..................................... ATTGCAAGAATTGAAGCAGCTGATGCGGCTAATGAA 208337 37 100.0 37 ..................................... TATTTACCTTCTGCGTACTCTCCTAACACAGCACGAA 208263 37 100.0 35 ..................................... CCATTAACAGACTTTTTAGTTATGTTTGGAATATT 208191 37 100.0 37 ..................................... TTATAAATACTGAAGTTCGGTGTGTTGTGAACATAAA 208117 37 100.0 36 ..................................... CTTCTAGAAAACCCGTCAAATGTTAAAATTTTGTCA 208044 37 100.0 37 ..................................... CCATAAGTGGACATCTTGCTCCACTTCTTAGAGGTCT 207970 37 100.0 36 ..................................... CTTATGTGGCTCTAAGGTTACGTTGCTTTCCGAAGA 207897 37 100.0 35 ..................................... TCTTAAAAGGATAGCCGGGAGCTACCCGGCTGTTA 207825 37 100.0 36 ..................................... CATTTAAAGTACCTACTGTGATTGCATCAGCCACAA 207752 37 100.0 36 ..................................... ATTATTTGTCAAAGTGAATGAAACCTATTTCATGTC 207679 37 100.0 36 ..................................... AATAGTTATTTTTATCAACTAACCATGCTGCAATGT 207606 37 100.0 35 ..................................... TAATGTAATTTTCAATTTCTCCAACTCCTCAGTAA 207534 37 100.0 36 ..................................... GATAAAAGTTTCATTTTATCGGCTGAATTAATTAAA 207461 37 100.0 46 ..................................... GATTGAAATACTATCCCAAAGTTTATCAAATACCTTAAAGTATTCT 207378 37 100.0 36 ..................................... CTTCATTGATACCACACCCCTTTTCTATTAATTTAA 207305 37 100.0 37 ..................................... GATAGGCAAGATTCATTGAACTGTAATATTGCAATTG 207231 37 100.0 36 ..................................... AGATTAATTGCATCAGGAGGTGTAGTTGGTTGTGTA 207158 37 100.0 36 ..................................... TTTGAACATAGATAAATCTTCTTACCTTTAAAGAAC 207085 37 100.0 36 ..................................... TTAAATAGTTCTACTTTCTTTTTCTTCTTCCGTTTT 207012 37 100.0 35 ..................................... CTCATTGACCAAGCGCCTATATTAGCGGTTATTAA 206940 37 100.0 38 ..................................... TAGATTTTATCCAAGCAAAACTAACAAAAGAACAGTTT 206865 37 100.0 36 ..................................... GTTTATCTATTAATACTGAAAGCAAATCAATTTCAG 206792 37 100.0 36 ..................................... TAAATAAACGATACCCATAATTATCTGTGAGATGCA 206719 37 100.0 37 ..................................... CGTTTCCAGGATTAAATTTAAGCGCTCGATCTACTTG 206645 37 100.0 35 ..................................... ATTATAAGTATTTACCGTCCGACGTTATCAACAAA 206573 37 100.0 38 ..................................... TGATAAACATGTATTTGTCCTCGAATGGGTCATACAAT 206498 37 100.0 35 ..................................... ATTCCAGAAAAGCCGGGCTTTGGAAAAATATTATT 206426 37 100.0 36 ..................................... TTGCATCCACTCCAAGAACAACGAGATAGTGTTCGA 206353 37 100.0 36 ..................................... AAACTTACAGATAGCTGCACTCCACCTTCTGAATAA 206280 37 100.0 37 ..................................... ATGCTTTTACAAAAGAATTAAAAGTTTTACCTTTTTG 206206 37 100.0 36 ..................................... ATGATGGGATCGGTGCAGGTCAGATTGCTGATTTGT 206133 37 100.0 37 ..................................... TTCTTTATAGTTGCCAGCTTATTTATAGCGTTCTTTT 206059 37 97.3 0 ...................T................. | ========== ====== ====== ====== ===================================== ============================================== ================== 57 37 100.0 36 GTATCAAAGCAGAGCCTCGCGATTAGAGGATTGAAAT # Left flank : AGAACCTAGAGCTAGGAAAAGATGCTGGGATTGCGAATTTATTCGTTATTGTAATGATCATGATATATCATCACAACAAGAACAAAAAGAGAAAAACTTAGAACTAGTAAAACAATTATTTAATACAAAGGAAAGAATATAATTATTGTAATGTATTTGCGATCAATGCTATGTAAATGATGGAAAATCTATTTTGTTTATTGATAAATAATAACGCAAGGATTTGTAGCGAATTAGCGAAGAATGTAACTGCATATATAGATACTTTGGAAAAGACGCATTCAATTTAAATTGGATGTGTTTTTTGTTAGTAAAACCTCGCTTATTTGGGTAATTTATTAATAAGGATTTTGCCAGAAAAGTCATTAATAAAATGGATTTCGAAGGAGGTTGACCATTTATTGCAGAACAGGGAAATTCGTAATAAAATGGAAATAGATAGATAGTAAGATTTTTGAAACCTTTGATACATATGCTTTTGACCGTAGTTAGCAAATGCG # Right flank : ATTATCATTGACCATACTCGGTCTTTGAAACCAGATGATCGCTGCCTTATTGGAGGGACTAATACAAAGTCTATATCATCCATATGCGTGGGTAAAGATTTCGTATCTAAGTGATTCCTATTCGATTTAACATGAGGGTGGTTAATTTTTATTCGATTTACATGGTCACTTTTGGGTTGATCAATAATCTATGTTTGTAATGTTACTATTGTAATTAAGAAGTCGCTCCCTTGGTGTTGCATCAAAGATTTAAATTCAGGTAAATGGAAGGTTTATACAAGTTAAAATAGAACTAGTTTTAAATATAGTTTTATCTTCATCTAAATTTTACCTAAAAAGTTTAAAGCTTAAGCGGGGTATTTAACAATGAACATTTTTTTAAAGTCTAAAAAGCTTTTGAAGGTGTTATTCAGATTTTTTTATTCGAAAATGACTTCAAATAAAAATATAAAAATAAAAAAGCATACTATCATTCTTATAACTGGTATGAGTTTATTTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCAAAGCAGAGCCTCGCGATTAGAGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 1 1494981-1495163 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB223527.1 Calidifontibacillus oryziterrae strain ZYK Scaffold1, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 1494981 37 97.3 36 ..................................G.. GATTTGAAATATATATCCGTGTTTCAACAAATTGCA 1495054 37 100.0 36 ..................................... CCGGTTCAGGTGGAGGTGACGATAAGAAGTTTACTC 1495127 37 97.3 0 ..................C.................. | ========== ====== ====== ====== ===================================== ==================================== ================== 3 37 98.2 36 GGTACACTCATTAATTATTAGTTCCGAACTTAACAAC # Left flank : TACATCGCTTTTTTTCGCAGTTTCCTCCGCAACTAAAAAATCCGCCACTGCTTGCAGCAACGGATTTTTCCCAATAAAACCGATAACAATCAAAACGAATACAATCCCAAAGAACAGCTTGAGCTTTCTCATTACTTTGCCCTTATCGATTTCATTTGGGAAATCATTTCTTGAACCATTTCTTTAGGATTATTAATAATTGATTTTTCACCTTTTTGATAAGCAGATTGAAGGATTTCTAACAGCTGCCCTTGATTCAGTTCACTAACTTTTTGTTCATTCATATATAGTACTCCTTTAAATCTTATACTAGTTACCTATAATACTAAGAAACTCGTTGTGAGAACATATCAAATTTTTGGTAAAAGGTTGCATCATTTGACAGTACTTCATATTATTCGGCAAAATGAAGCGTTTTTTGCCCCTTCATTATAGCATACATATACGTAACAAATTATGAAGAATTTCCAATAATTTTCAATTATGAATTATGATGATCC # Right flank : CTCTATTTTTCATGTTGTATACGTATTTTTCTAAACATAAAAGGTATCAAATTGTAGCTGCCCTTTAATTAGGTTAATAGTATTTGAAAAAAGGATTTTCATTTTCGTATTTTTTTGTATCAATTAACCTCTTTAAAATCTAACTAGAGCTTAAATTCTATATGCGGCTAATAGTCTTTATTCTTTTTTGATAATCAATCATGATTTTAATTGAGATCGGAATTAGCAATACGGTTAATGCGACAATTCCTCCCCAGCCGAATGAGGTCCACAAAAGACCTGTTGCGGTACCACCTGATGCAACACCAATATAGTAGCTTACTAAATATAGACTTGATGCCCCACCTTTATGATGTCTCGCTTGCATATTAACATATGCGGCTGCCATTGAATGTGTGATAAAAAAGCCAAGACATAGGACACATAACCCAATGACGATCATCGGAATTGAGCTAAATAATGTCATAAGATCGCCAGCAATCAAAATCACAACCCCAGAA # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTACACTCATTAATTATTAGTTCCGAACTTAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //