Array 1 892518-892678 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040058.1 Anaerostipes rhamnosivorans strain 1y2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 892518 29 96.6 37 ...T......................... TTTTCAACACAATATCCGAACGATAACAATGTGTTAG 892584 29 100.0 37 ............................. TATGAAGCTAGGAGTAATGCATCTGCTGGCGGCCCGT 892650 29 93.1 0 ........................CA... | ========== ====== ====== ====== ============================= ===================================== ================== 3 29 96.6 38 GATAAACATTAACAAGAGTTGTATTGAAA # Left flank : GCTGCTTCTGGTGATGATCGTATCAGCTGTTCCGTTGTTTCTTTATTTGGATTTTATCGGGGTCGCAATTTATGCTGTAATGTTTGGGATTACAATGTACTATGCTTGGAGCATTGAAAAACAGAAAAAGGTGCATGACATTCAAACATATAAAGAAATTACAGCCTTTATGGAAGGAAATCATTTGGATGAAATTCAAAAGTACAGGGAGTCTGGCAAGAGGCCGTATCAAAAGGTGGCATTAGCGATCTGTGCGGGACTGATCACATTGGCGGTTTGTGCAGCTATGATGTATTTGTTGAGTTGACCTGGAAGTAAATCAAAAGTTTTCCCAACCGGACAAAGTAAAACTTGCGAAGAAACCACGGAAAATAGCCAGATATGGGCTGTCTGAGAGGGTAGTAAGAAAAATTGAGATCGGTTGGGAAAAATAGAAGGAAACGTTGATTTTATCAGGAAAATTGAATATAATGAAAAGGAAGAATGACGGAAAAACGTTG # Right flank : AAAGAAGATGATTTCAAGGAGAAGTATTAAATTAAGTGCTAACTGATCGCATAGAAATTAAATGATATAGGTTATTTAACTTTATAAACGGATTACAGTCAGCATTTGGGGAATATGAACTATTTCATTTTGCAGATATAGAGCAGGAATTTAAAGAGGAAGTAAGAAATTTAAAACACAGGCAGCTGATTCAGAATGAGAATTGGCTGCCTTTTTTGCAGAAAAGGTATTTCAAATTACACAAAGATTTTCACCAGAATAAGGTTGTTTTCTTTTTTTTCCAATGTAGTATAATAGGACTGTAATTATTAGAAGCAACTAACGGAAAGGATACGACTTGAAATGGGACTGACCATTCATTACCAGAAAGAGAAAAAGGGTCTTAAGCTTATCCGCTGTTACGGAAATGACGCTTTTGTGACACTTCCAGATCAAGTGGACGGACAGCCTTTTAAAGTCTTAGGGGACTATGCATTTTCCGAGTGGAAAAAACAAGAAGA # Questionable array : NO Score: 4.00 # Score Detail : 1:0, 2:0, 3:3, 4:0.83, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACATTAACAAGAGTTGTATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 901386-901874 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040058.1 Anaerostipes rhamnosivorans strain 1y2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 901386 30 100.0 36 .............................. AAATTTTCCATCTCTGTTTTTGCGATGTCCCAAAAT 901452 30 100.0 34 .............................. GCTTGTAACCACTGCCGACCACATTCACAATTAA 901516 30 100.0 35 .............................. TATAGTCCCCATATGGTACGGTTTTTTCCTTCCCG 901581 30 100.0 36 .............................. ATGACTTCCTGTGAAAGACCTAAGCCTTTTAAAAAA 901647 30 100.0 36 .............................. AACATGTTCTGTCCTGATCCCACATACTGTTCCTGG 901713 30 100.0 35 .............................. AAATTATCGATTACAGAAATAAAACGTACATTGTG 901778 30 93.3 36 ...T...C...................... AACTCTTCCCACGATTTAGAAAACTCGTGGTTTATA 901844 30 83.3 0 ...T....G......A.........C..T. | C [901867] ========== ====== ====== ====== ============================== ==================================== ================== 8 30 97.1 36 GATAAACAAAAACAAGAGTTGTATTGAAAT # Left flank : TGGAGAGCCATAGAGAAGCATCTGATGGAACATGGCTTTGGACTTATTTATATGATTCATCATATAGAAAAACATAAGATTTATTATGACTTTGGAAAAGAACATTGCTTTTTTGTGGTCGAGACATAGAAAGGGGACAGAGAAATGTTGCCGAAGGATCCGGTTATTTTATTAAGTTACATCAACACTCAGCTCAGGGATTATTATGACAGCTTTGAAGAGCTGTGCAAAAGTCTCTGCGAGAACCCGGAAGAGATCAGTACAAAACTTTCTGGGATCGGATATGAATACCATTCGGAAACAAACCAGTTCAGATAACATCGGAGTTTCCCAACCTCTGAATATGCAAAAAAGCTGAAGAACCGCTTAGAATAGCGGATAGAAGGCTGATTCTGAGAAAAAGCAGAAAAATGGAAAACGGTTGGGAAAAATCATGGAGAACGTTGATTTTATCAGGAAAACTGGCTATAATGAAAAAGAAGAATGGCTTAAAAGCGTTG # Right flank : TCTATCAGAAACGTAAGCCTTTATAGGATAAACAAATACTCTCTTATCTAATAAACAGTAAGAAACATTTTCAATATAGTAATTCTACGAAATCCGGCAATACCGGATTTTTCTATTTTAATTTGTATACCCAAAAGGTCATCCCGTATTCCATACCCTACAGGTGGACGTGCTTCGCACGATAAAGTATGCCCAGTAGGGCATCCCGTGTTCCATACCCTTCGGGTGAGCGTGCTCCGCACGATAAGGTATTACATTTTCACCAGTTCTCCGGCTTGCTGTCTCAGGGACGTAAGATTTTCTAACTTTCAGCAAAGCCTCTCCGGCGGCCCGTTCGGAACTCGCTGACGCTGACCTAGAGCACTTAGTGAAGACAAACAAAGTGCAGGCTAAACTTAGTGAGAAGGTCGTTCGAAGGAACTTAATGAACGTTAGCCAGAGGCGAGGCGAGAATTTAGTGAATCGAACCTCCTTGCCTCCGAGTCTTTTCTTCAAGAAGA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:0, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAAAAACAAGAGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 3 1026741-1027160 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040058.1 Anaerostipes rhamnosivorans strain 1y2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1026741 30 100.0 36 .............................. AACGGATGATCGTCTGACATATAAAAATATACTGAT 1026807 30 100.0 36 .............................. AGTGTAATGTAATCTTTCTCAAAACTGTCATACAGT 1026873 30 100.0 34 .............................. AGCATAAGGGGTGTGCTATCTGTGGCAAGCCTGG 1026937 30 100.0 35 .............................. GTGATAGGTTTATCAATCCAGTCTGGATTCAGGCC 1027002 30 96.7 35 ...A.......................... AAAACAACAACTTGCTCACTATCCTGTACTAAATT 1027067 30 93.3 36 ........T........A............ TGTTGACGATAATACAAATCAAACAGATCTTGATAT 1027133 28 86.7 0 ........A..............--A.... | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 96.7 36 GATTAACAGTAACAAGAGTTGTATTGAAAT # Left flank : CGATCATCCCTACCGATACATTCCCGAGAGATCTGACCAAGCTGCTGAAAAAACCATACAATAGAATCAAAACAACATTTGATCTCACCTGCCTTACAACAACACTGATCATATCCTTGTTTATTCTGAACAGACTGGAAGGTATCGGGGCAGGCACAGTTTTATGCGCGCTGTTTGCGGGAAAAACCATTACAGTTATACAGAAATGGTTTGACCGGCACATCAAGTTTTACTGTTTCTCTTACAGAGCAAAAAAGAGAATGATGAGACCTATATTTAGTTTTTATAGAACACTGAGATAGGAAATGGATCGAGAGTTTTCCCAACCGGATCCTTCGTGCAAATGGCTGGAAGGCGCTTAAAATGGCGGGTTGAAGGCAATAATAGACGAAAAGCTCAAAAGTTTAAAAGTTTAAGGAGGTTGGGAAAAAACGATGGAAACGTTGATTTTATCAAGAAAACTGACTATAATAAAAAGAAGGAATGACGGAAAGACGTTG # Right flank : TTCGTTATCCTAATTAATTTTAATATATCAAAACGGACAATAGAGACTATCCAACTTTATTTAAATTAAATAATTATTATATGTAGGGACAGGGACATTTCTGTCCCTGATTTTGTGTTGTACTAAACTGCTATATTCATGTTATAGTTTCCTGATTTCTTCATCCTTATATCTCAAGGAACTAACTTACAAAAGTTTTCACCAATTTGGAGGATTGCTTTTGAACCAGGCCGGGAGCATTGGTGAAAATTCATAGGTTTTATGTTATGATAAAAAGGTATAACACAAAGGAGGATTTATGAGATTTGGATACGATATTCCGGATTCTTTTTGGAGCTTATTCCGCTCTGTGAACCGGGATCTTTACATAGAGGCGCTGTTGAAGATCAGCGAAGAATATGAATACAACAACTACTTTTTGAGCAGGGAAGTCTGTATCCAGGTCCTGAGTGACTGGAACGCGGACAAGCGTATCTGGCTTCAACGAGAAGAATTTGAGT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:0, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACAGTAACAAGAGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 4 1038284-1038768 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040058.1 Anaerostipes rhamnosivorans strain 1y2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1038284 30 96.7 35 ...............A.............. TTCCAGCGGAAATTAAGGATACAGCATCCTTTACT 1038349 30 100.0 34 .............................. CGTTTCCATTTGCGTCTGTTGTAGCAGAAGTGAT 1038413 30 100.0 36 .............................. GCAATATTACCGCCAAACCGGCCCGTTTCGCAACTC 1038479 30 100.0 36 .............................. GTCATCTGGAAACAAAAGATGACGGCCGGCAGAAGA 1038545 30 100.0 34 .............................. CAGCGAAAGCAAAAGAAATGGGTGCTGCTACAAA 1038609 30 100.0 36 .............................. CAACGAATTAAAGCTACTTTCTAATCGGGTACAAGC 1038675 30 100.0 35 .............................. GATGAAGTTCGATTGCACTGATTGTTAGAACTTAC 1038740 29 83.3 0 ...T.T...................-.T.G | ========== ====== ====== ====== ============================== ==================================== ================== 8 30 97.5 35 GATAAACATTAACAAGAGTTGTATTGAAAT # Left flank : AAACGTTGAAAATATAAACTTGATTGATTAAGTAAAGTATATGTTGCTTCCAGTATATACCTATGATTTGTGGAAGTAAATAGCTTTGAGATAAACTTGATTAAGTTTGTATAGTATCACAAAAAAAGAGGAGAAATACTGTTAGTATTCACGAGGATTTTTATCCATTATCTCCAGTTAAATCTGGAAAGGTGTCCTTCCGATCATGGAGAAAAATAGTTGGAGGTGGCGCCTTTTGGTTGGAAGCTTTCCTGGGACGACAGAATTAGGTGAGGAGATTATTGAGTGATCTTATATTTTAAAAGTGAATATGATCCACAATGGTGATTTCCCAACCTGAAAATTTGAAAAGACCCGGGGAATCCCCAAACTAAGCCAATGAATGGGTTTTTGGCATTAAAATTAAAAAAAATGAAATCGGTTGGGAAAAAAGAGAGCAAACATTGATTTTATCAGGAAAACTGACTATAATAAAAAAGAAGAATGGCTTAAAAGCGTTG # Right flank : GCTAAGTCCCAGGAACTCACGAATATCAACTTACGGTCATACTTCGCTGGATGACAGACTTTTCTTATTCATTACCCTATAGTATCCATGGCAGACTTAGGTTTGACCTTCTGTAGATTTAGGGAAACTATTATTTATAAATCCGGCATTGCCGGATTTTTTGTTTTTTACATTACCAAGGTGATTCAAACCTCCCTCTAAGCAAAATGCACACAAAGGTAACATTTTCCCCATGATTTCCGTTCGGCTCTTAGAATGATTCGCTCTAATTATGTAGAACATGGACGTAGTGTTTGCTGGACATGGATGACGGCTAAACAGAAGGTGCCATTCTGCGATTTTCTCAAAAAAACTCTTTCACTCTTTCTTATTTCTATGTTACAGTATAAATTAGTGTTTTCTGTCCGGAAACGGTGAAAAGTGTCGGACAGAGAATGATTTTATCAAATGACGATGGAGGAGATTGAATTGGTAACAATAGCAAATTATCTGAGGCCGGA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:0, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACATTAACAAGAGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //