Array 1 14820-21134 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNSY010000013.1 Lactobacillus delbrueckii subsp. lactis strain FAM 24852 FAM24852-i1-1_scf13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 14820 28 100.0 33 ............................ CTTGTATCGGCAAGAGACTTGTACAAGGCACTG 14881 28 100.0 33 ............................ TTTATCCAGACCAGACAGCTAGTGTAAGCGTTG 14942 28 100.0 33 ............................ TTCCAAGATTTGACTTGCGTTAGTTTCGATTCT 15003 28 100.0 33 ............................ TTGTCAGCTTTCGCCATTGTTTCGCCGTTAGGG 15064 28 100.0 33 ............................ CTTTTTGGAGACTCCGCAAAGGACATCCACTAA 15125 28 100.0 33 ............................ TGGTCGGACAACCTATGTGCACTTTGCTTATGC 15186 28 100.0 33 ............................ TCACCGCCCGAATATTTTTCTAGGAAACCGGCA 15247 28 100.0 33 ............................ CCGACTTCGCCGGCGTTTGACTTACCATATACA 15308 28 100.0 33 ............................ TTGTAAAATTCTATTTGATGGAAAAAGACAATA 15369 28 100.0 33 ............................ TCTCTTCCTTTGAGGTACGACATAGTTGAGCCA 15430 28 100.0 33 ............................ CCACGGGCAGGCTAGCGCTAGATTAATTAGTAA 15491 28 100.0 33 ............................ TACACAAGCGTGTAAGCAGTACATAGATGTATC 15552 28 100.0 33 ............................ CGAGGGCGGGAAGCAGAGATTTACGCCAAAAGA 15613 28 100.0 33 ............................ TATAATTAGATCAAATGAAAGAGGTAAAAAAGT 15674 28 100.0 33 ............................ TTGTTTGCGCTTCGTCCTCCCACTCCTTGACCA 15735 28 100.0 33 ............................ TTTTCCTGGTAAAAAATTTCCTGGCCTAGCAGA 15796 28 100.0 33 ............................ CAAGGTCTTGATCCTTGTAGAGCTTATCACCGT 15857 28 100.0 33 ............................ TGGATTGAAAACATCGAGGAGCCGGTGGTCTAG 15918 28 100.0 33 ............................ TGTTTAGACTAAATTGCAAGCCTTGACCTTCAC 15979 28 100.0 33 ............................ ATCATCGTAGCCCTTAACGGAAGTTCTGCTGAC 16040 28 100.0 33 ............................ TGTTCTACTCCTTAAATTGCTTTGCCCACTCAT 16101 28 100.0 33 ............................ TAAACAGCAGTCACTATACGACTTTTTCAACCA 16162 28 100.0 33 ............................ TTATGGCATTTTGCCGTTTTAAAGCAACAAAAA 16223 28 100.0 33 ............................ TTCCACTTACGACAGATTGGGCTCGTTACCATG 16284 28 100.0 33 ............................ AAGGCTTGCATTACCACCGGTTAGATGTTAGTA 16345 28 100.0 33 ............................ TGGGAAGAAACCTTTGCCGAAGAATTAAGAGAG 16406 28 100.0 33 ............................ ATCGCCATTGGATGGTTTCCAAGCTGTGCGGTT 16467 28 100.0 33 ............................ TATAAGGACGGTTTGACAACTCAAACTATTAAT 16528 28 100.0 33 ............................ TAGTTGGTGCTGATATCTCTGCGAGGTCTGGAG 16589 28 100.0 33 ............................ TACTTCTTCCACAGGAACAAACCCGCTTGAAAC 16650 28 100.0 33 ............................ TAATGGATCGAATGCTGATCGTCAGATCACCGC 16711 28 100.0 33 ............................ CTCCACCATTCCTCAGTGTGCTGGTAATGCCGT 16772 28 100.0 33 ............................ TAGTGTCATTTCCCAGAGAGCAAACACGGTATC 16833 28 100.0 33 ............................ TGTTCGATTGGTTAGCTTTCGTTGTGGGTGATA 16894 28 100.0 33 ............................ TATTCAGCACGAGTTAACTACTGGTATCACTGC 16955 28 100.0 33 ............................ TTTTCAGACCGGTTTAAGAAGTACAGCGCCGAT 17016 28 100.0 33 ............................ TGATGAAAGCTTGACCATCAATGACTACGCTAA 17077 28 100.0 33 ............................ TGTTGACGTAGTCGCCACTAATCCAGTCGGTGC 17138 28 100.0 33 ............................ TGTCGGCGGATCCATTTGGGATGGTGTTAAGTC 17199 28 100.0 33 ............................ TGTGTATAATGCGTGAATTATGAAAAAGCGGAA 17260 28 100.0 33 ............................ TGGCCGCTCTTGGGCTTGCTGTGGTGCGCTATG 17321 28 100.0 33 ............................ TAGCTTCGATGATCCTAGCGAGTACTGGACAAA 17382 28 100.0 33 ............................ TTCTGAGCGCCGTTTTCGACCGTAAACTTTAGG 17443 28 100.0 33 ............................ CATTCGGGGCAATTGAAGAAGCCGCCGGGGAAT 17504 28 100.0 33 ............................ CAGTTCTTCTGGATTCACTAAAGGACCTTTGTC 17565 28 100.0 33 ............................ TAGCCCGTTACATGCGATTGTGGGGCTTGACCT 17626 28 100.0 33 ............................ TCGTAAATCAAGGTTACAAAATTTCTCTTCAAA 17687 28 100.0 33 ............................ TCGCTTGTTCAAAAATTCTACTTGCAAAGCAAA 17748 28 100.0 33 ............................ TCATGAAGAACATCCAGACATCCCAATCAAGTG 17809 28 100.0 33 ............................ TCATCATAGTTAAAGCCTTTCAACTTACACATG 17870 28 100.0 33 ............................ CCAAAGTCTGAAAGAACGTCTTTTAGGTTGCCA 17931 28 100.0 33 ............................ TTTCTTCTTAAAAATGCAAAGATCCGGAGCGAG 17992 28 100.0 33 ............................ CCTACGATCGAACCAGATTCCCACATAATATCG 18053 28 100.0 33 ............................ CCACATTGTGCCCAGAAATATGAACCAACTGCC 18114 28 100.0 33 ............................ TTCGTCCGCTGGCCAAAAGCTCCTTAACGGTGA 18175 28 100.0 33 ............................ TTTTTTTCATCGCTTGTCATCCTCGTCATGGCG 18236 28 100.0 33 ............................ CTTCAGTCATGGTCTTTCCACAAATCTCTTTGA 18297 28 100.0 33 ............................ TTCTTGGCTCTTCGGGCTACCCTTGCCCGCTTG 18358 28 100.0 34 ............................ CAAAGCACTAAAGAAGAACACCAGCGCCGGTTGG 18420 28 100.0 33 ............................ CAATAGACCAAATTATCTTTTCATGAGTATCGA 18481 28 100.0 33 ............................ CTTCATTTGGGACGGTTTCACCGACCCGGCCGG 18542 28 100.0 33 ............................ TTGTTAGAAGTCGATAACCCTAACGAGGACGCC 18603 28 100.0 34 ............................ CGGCAACCAGTTGGTCGTACAAAGCGGCCGTGAA 18665 28 100.0 33 ............................ TGCGATCAAAGATGGCCAATTTGACGCCGTAGA 18726 28 100.0 33 ............................ TTGCCGGCGGCCCGTGCTACTTGGTAGCGCCAA 18787 28 100.0 34 ............................ TGCCCAGCTGGAGGAAGCTGGGCTAAGTTGTGCG 18849 28 100.0 33 ............................ TTGATTGGCATGCTATTTAGATTTAATCCATCT 18910 28 100.0 33 ............................ TAAAGGAGTGAGGAAAATGTCAATTGGAACAAG 18971 28 100.0 33 ............................ CTTGCTCGTGTCCGTGGCGGCCTTCTTAGCAAT 19032 28 96.4 33 .......................A.... TTGCTGTAATCATACCGTTAACAAGGTCAATTA 19093 28 100.0 33 ............................ TTGAACGGTAACACGACAGTTACTGGGCGACTC 19154 28 100.0 33 ............................ TAATTCGACCATCGGGCAGGTAGTCAATGGACA 19215 28 100.0 33 ............................ TAAACTAGCCATTTTTCTCCTCCCAACGTTTCT 19276 28 100.0 33 ............................ TCGTGGTCAGCAAGCAAGGACGGCGCAAGCTAA 19337 28 100.0 33 ............................ TCAGCTCCAGCAAACCATCTGGCAAAGGTTGGA 19398 28 100.0 33 ............................ TGCCACCCGATAGTCGGGATAAATGTCGCAGTA 19459 28 100.0 33 ............................ CGCTGTCGGGATCAACTGGGCCGCCACAAACTT 19520 28 100.0 33 ............................ TTACATAGCTTTCATAAGTAGTCATTTTTCTAA 19581 28 100.0 33 ............................ TGTAGTACATGGCGATCCTCCTAGAATGGCAGG 19642 28 100.0 33 ............................ CAGCTAAACAACGCAAGTTTGTAGCTGAATATG 19703 28 100.0 33 ............................ CGTAGATGCAAGTCTTTTTTGGAGATTTTTTCG 19764 28 100.0 33 ............................ TGCTTTCCTTAGCTTGTGCCCAAGCCATCTTGA 19825 28 100.0 33 ............................ TACAGAAAACCTAGTGACGTAATGGAAGCCGTT 19886 28 100.0 33 ............................ TTCTTGACGCTATACGGTACTTTGCGGCCGGCG 19947 28 100.0 33 ............................ TCAGCTCCAGCAAACCATCTGGCAAAGGTTGGA 20008 28 100.0 33 ............................ TGCCACCCGATAGTCGGGATAAATGTCGCAGTA 20069 28 100.0 33 ............................ CGCTGTCGGGATCAACTGGGCCGCCACAAACTT 20130 28 100.0 33 ............................ TTCAGTTGATCAAGACATGCTGACCAGAGGACA 20191 28 100.0 33 ............................ TGTCATTATTGGTGAACGTTCAAACGGTAAAAC 20252 28 100.0 33 ............................ TACTTAGCGAATATTTCATACCGTCAAGTTCTA 20313 28 100.0 33 ............................ TGAGTACCGCAACGAACTTCCAAGCCAGTTAGG 20374 28 100.0 33 ............................ CTCCTCATACCGGCGAATTAGACAACCGGCCCC 20435 28 100.0 33 ............................ TCAATCGTGCCAACGTACTCACCCCTTGCATAA 20496 28 100.0 33 ............................ TCTAGTCATTCTGCTTTACGTATAGATTTTTTA 20557 28 100.0 33 ............................ CGCTAGGGGCTATAATACGATTGTCTAAAAAGC 20618 28 100.0 33 ............................ TCGTAGGCAAAGACAATGTCGCCATATCTGCTC 20679 28 100.0 33 ............................ CGAGAAGACAGGAGAACCTGTCAAGGAACATGA 20740 28 100.0 34 ............................ TGGATCATCCTTAGCGTCATAGTTCAGAACACAG 20802 28 100.0 33 ............................ CCTGAGATCAACGCAAAACGGGACGATGGTCGG 20863 28 100.0 33 ............................ CAGCGCTGTCTGCTGACTCATAGTCACCATTTG 20924 28 100.0 33 ............................ CCGGCTGCAGCTTGTACCTTGCCTGTTATTGTG 20985 28 100.0 33 ............................ CGTGATGATAATAAGGCTGAGTGGATGCCTTTT 21046 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 21107 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================== ================== 104 28 99.8 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTTGATAAGGAAGGCGTCCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAGCTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : CGTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGAGGTAATAGAGAAGGAGTGAGGAACAAACATGAGCATTTACGGTAAGTACGCCGATTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAGGCTATACGAGTACCTGAAAGGTCGCGTCAAAGGCGAAGAAAGCATGACGCAAAAGTGCGAAAGAAAAGGTTTACCGCTGACGCCAGAGTCTGCATTGATTGAAAACCGGGATGCGATTGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGGTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //