Array 1 278664-278085 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSTP010000004.1 Streptomyces olivaceus strain FXJ8.012 Scaffold4_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 278663 29 96.6 32 ............................G ATCGGCGGATAGATCCGGTCGGTGGGGATGAA 278602 29 100.0 32 ............................. GTCCGCTTCGGCGCGCGTGGCGTGGCGCGTAG 278541 29 100.0 32 ............................. CGGTTCGAGCGACAGACCGGCATCACGCTGGG 278480 29 100.0 32 ............................. GAGCCATCGACGACGGGTACGAGATGGCCGCC 278419 29 100.0 33 ............................. ACCTCCCGCCGCTCCAGGTAGCCGTGCTCGCCC 278357 28 96.6 32 .....................-....... ACGAACCCGGCGACGTCGATCCCCGCCATCGG 278297 29 100.0 32 ............................. ACCCCACAGTCCCCGTACTGCTCGGTGGTCGT 278236 29 100.0 32 ............................. GACAGCAGCCGGCCGGTGCGGCCGTCGTACAG 278175 29 100.0 32 ............................. GGGTCCGTGACCATCGCGGAGAACGGCGTCAG 278114 29 89.7 0 .............T..........AC... | C [278092] ========== ====== ====== ====== ============================= ================================= ================== 10 29 98.3 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : ACACATGTTCACCCGACGACCGCGACCGGGCCGAGTGGCAGCCCGGCAACCCCGCCTGGGGCCACTGCGACATCACGGCGTTGATCGTCAACGACATCTTCGGCGGCGATCGCGTGGTCGGCGAGGTGTACCTCAACGGTGCTCAGCGCAACTTCCACTGGTGGAACCGGCTGCCCAATGGCATCGAGCTCGACCTGACGCGCGAACAGTTCCGCCTCGGACAAACCGTCACGGCCGCCCGTGTCGTCGAACGCCCGCCCGGCCCGCTGCCCCGTCGCTATGAGGAGTACCTCCTGCTCCGCGAGCGCATGGCCGAACACCTCAGCCCGCTTCCGGAGCCTGCGTGAGGGAGAGCCATGCGGCAGTCGGAATCCGCCGGAGCTGTGGTCGACCAACTCTGCGTACGTTCGGACCGATACCGCGGGGTGCCCTATTTGCCGGAATCTTCGAAAGTCACTGAAAACACGCCTCTGCGGCCATAAACTCGCAGGTCAAACAGT # Right flank : TGCGGAGATCGGCTTCAGGGTCGCTGGGTCAGTTCACTGGAGCTTCTCGCGCGTCTGCGCGCCGCTGGTGGGCGGCGCGCAGACGGGTGGGGTGTGCTCGGTGCGGGGGCGGTCAGGCCCAGCAGCCGTTGACGGTGGCGGCGAGGCCGTCCATGGCGTCCTTGATGTCCGTCGGGTCGGCCGTCGAGTTGTTCTCGATGAAGGAGAAGATCCGCCAGTCGCCGTCCTCGGTCTTCGTGACACCGCTGAGGGCGATGGCGCCGGTGAGGGTGCCGGTCTTGGCCTGGACCTTGCCGACGGCGCACTCGGAGTTGGGGTCGTCGAAGCGGCCCCACTCCGGGCCGAGGCTCGCCCCGGCCTCGCCGGCGACCGGCAGGCCCTCCAGGATCGAGCTGAGGGCGGGGGACTCGGTGATCGAGTCGAGGAGCTGCGCGAGGGTGGCGGCCGGGATGCGGTCGTCGCGGGAGAGGCCGCTGCCGTCGTGCATCTCGAAGTTGTCG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 289918-289461 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSTP010000004.1 Streptomyces olivaceus strain FXJ8.012 Scaffold4_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 289917 29 100.0 32 ............................. ATCACCACGCGGTTCACGGTGGTCGGTTCCGT 289856 29 100.0 32 ............................. ACCCCAGCCACATCGGCCGGGGGCTCCTTGGT 289795 29 100.0 32 ............................. TGGATCGGGACCTGGAGGACCCAGGAGAACGT 289734 29 96.6 32 .........................C... GACCAGCTCAACGCCCGATGCTGGGTCGACGG 289673 29 93.1 32 ...........A.....A........... GTGTACGTGCACGGGTTGCGGAACTGGTACTC 289612 29 96.6 32 .............G............... TTCGTGGAGTCGTGGATCACGCCGAGGGTGAC 289551 29 75.9 33 ........T..A..A..........GTTT GGCGGGTGCGCAGGTAGAGGCGGTCAAGCGGCG 289489 29 69.0 0 ..A..G.G....T.A.T..CA..C..... | ========== ====== ====== ====== ============================= ================================= ================== 8 29 91.4 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : CTCCGGTCGGGAGAACGAGGAGGAAGCCTGGGGCAGGTTCCGCAAAATGCTCCAGCCGAACAAGCTCGACCGCACCGAGGTGCCGTTCGTCAAGATGCGCTACGACAACACCCGCACACAGAGCATGAGCAAGGGCGACGCCCGCGGCTTCGCGCCTCTGGACACTCTCGTGCGGGAACTGGGGCTGCTCGACGGTGCTCCCGGCAGCTTCGTCGAGTGGGAGAACCGGCACGGCGCCGTCTGGCGGGCGGACAGCAACAGCGACGGCCTCGAGCTGGCACACGACGGCACGCGGGAAACGGTGGACACCGGCCAACTGCAGGCTACGGCCCGCACCAGCGTCCAATGAGCCCGGTCCCGTGCCCATTGCCCACAGAGCCTGCGTAGACGCGCAAGGTGAGTCCGACTTGCATCACATGCTACTCATGCCCCATTTGCCGGATCTTGTAAAAGTCACTGAAAACGTGCCCCTGAGCCCATAAACTCCCAGGTCGGACAGT # Right flank : TGCGCGGTGGCTGGCTTGGATGGTGTTTCCACCGCACCGGTCGAGACGTTGTGGACCGGATCAATAGGTGAGCGTCATCCGGGTTTCCGGCTTGCTGATGGTGTGGCCTGGGGCGTCCCCGGTGTCGGAGGGCGTGATGGTCAGTCGTGGTACTGCCAGGCGGGCGGCGCCCCACGCGTCGATGTGGGCGACGAGGTCTCGGGCCAGTTCCTCGCCGCGTTGTCCGTATGCGGTCGCGCCGAGTCGGAACGGGCGTTGCGGGTCGGCGTCTTCGCGGGTCACGGTCAGGTAGGCGAGGGAGGCGTCGTCGATCAGGGCGGGGGTGCGGGCAGGTGTGGCGGGCCTGCGGATCAGGGCCTGCTCCATGGCCTCGGGGGTGGCTTCGAGGCGGCATACGCGGTCGTCGTGGGCGCTGGCGCGCAGCCATACTCCGTCGAAGGACTCCTCGCCGCCGATCCGCTGGGCGGACAGGACCTCGCGGGCGGGGTTGTCCGCTCGCA # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 297512-295959 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSTP010000004.1 Streptomyces olivaceus strain FXJ8.012 Scaffold4_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 297511 29 100.0 32 ............................. GTGGCCCGGACGGTCATCACGTTGACCGTGGG 297450 29 100.0 32 ............................. GCGCCCCCAGTCGACGGACTGGGGGCGCGTGC 297389 29 96.6 32 ............................G ACGCTCGGAACCTTGATCGTTCTCAAGTTCTC 297328 29 96.6 32 ............................T ACCAGCCACACCTCCCGGAACAGTGACGGGAA 297267 29 96.6 32 ............................G CGTGTGGGGAGTCCGCCGCGGAGGCCGAAGGC 297206 29 100.0 32 ............................. TCCTCACGCGCCTCAGCGACCACCGGACTGCC 297145 29 100.0 32 ............................. TGGCGGGCGTCCTCGGGCCGGGGGACGTCAAC 297084 29 96.6 32 ............................G CGGGACACCGAGGATGCCGTGCGGTCCCGCAT 297023 29 100.0 32 ............................. CGCCCTCGCCTGGGACCGCTGGCCCGACGGCT 296962 29 96.6 32 ............................G GCTGTGGCCACGGGTTGACGCTGCGGCAGTCG 296901 29 100.0 32 ............................. TCGGCGGTGCCGTCCGCGCGGATGATCCACCC 296840 29 96.6 32 ............................G GTGGCCGAGCGCCTCGGCGTGTCCCGCCGGAC 296779 29 100.0 32 ............................. CGGGCCTTTTTGCGTTGGGGCCCTGGTCAGGC 296718 29 100.0 32 ............................. CTCGGCAGCGATGACCGCGCGCTGCGTCTCGC 296657 29 96.6 32 ............................G ACCCTCACGGCCCTGCGCGCCGGGAGCTCCCC 296596 29 96.6 32 ............................G CTGAAGCCCTGCAAGGACTGGCTCGCCTCGCA 296535 29 96.6 32 ............................G ATCGCAGCGCTCGCGCTCCGCCCGGAGGGCTG 296474 29 100.0 32 ............................. AGGCACAGCGGGCCAGGAGCGCCCTCCGCGGG 296413 29 100.0 32 ............................. CCGGGTCTGCATCGACGACGACTTCGGACCGT 296352 29 96.6 32 ..T.......................... CGAGAGGACTCACATGCCCAAGAAGACCAACC 296291 29 96.6 32 ............................G CAGGTCAACGACGTTCACGGCCACGCCGCCGG 296230 29 96.6 32 ............................G CCGCGGGCGTCGCTGGCGAGGCTGAGCGTCCA 296169 29 93.1 31 ..........T.................T GGGACGTGGCCCGGTACTGGCCGGGCCGGTC 296109 29 93.1 32 .......................T.C... CGCCAGGACGTGTCGCCGCTGTAGGCGGTGCA 296048 29 82.8 32 .............T.A..T......C..G GAGCTGCGCGGCCGGTGCCCCGTACGCCGCGC 295987 29 75.9 0 ....C..A.............ACG.CC.. | ========== ====== ====== ====== ============================= ================================ ================== 26 29 96.3 32 GTCGTCCCCGCGCCTGCGGGGGTAGTTCC # Left flank : GGCAGCGACCTGCTGGACGAGGACCTCGGCGCCCTCTGGGACGACGGCGACACCGTCGTCAGCGGCGGCCGCAACTGGAGCGCCACGCACCACCTCGACATCATCCCCGAACCCACCTCCGCAGAGGCGGCCCCGTGAGCGCCGGAACGACCGTAGTCGTACTCATCGCGGCCCCACCCGGCCTCCGCGGACACCTCACCCGCTGGTTCGTCGAGGTGGCCGCCGGCGTCTACGTCGGTAACCCCAACCCCCGCATCCGCGACCGCCTGTGGAGCGTCCTCGCCGAACGCATCCACGACGGCCAGGCCGTCATGATCGAACCGGCAGCCACCGAACAGGGCTGGTCGGCCCGCACCGCCGGCCGCGACCGCTGGACCCCCGTCGACTTCGACGGCCTGACCCTCATGGCCCGCCCACGCCAGAACGGACAACCCTGGCGGCCCACGAACGAGGTAAAGCAAAACGGCATGATCACCTGACAAAACACCAGCTCACGAAGA # Right flank : TTGCAGAGCTTTGTGTGGACGGTGGAAGCGAGGCGGTCGTCTTCTCCAGGCGGATCGGAAACCGCGGAGCGCCGCCGTGGCCGTCATGATGACGATATACGGCTCGGTTCGGTGAGAAGCCAACGTCAAGGCGGCGAGGCGGGCACAACACGAGCGCCAGCGGTGTCTACGCGACTGGCCGTTTGCTCGCCGCTCGCCGCCGTCCGCGGCATCTCATCAATCGCACTCGACTAGCGTCCACCGTCATGTCGTCCCCAAGCGCTCAGCTGCGTCTGACGGGCCCACGGGCCACGTCGGCGGGCTTGTCGAAGCCTCAGCCTTGGGCGTTGCCCCTGCGAGGCGGCAGTTTCCGGTCGTGAGGGGCTCTCTTCTCATCGAACCTCTGTGCCTTGTAGGTTCGCGTGTGCGCAATGAGTTGTTGCTGATGCGCACGGGCTGACGGGGGATGAGCGATGGTGGGGCACCGGCCGACGGATTGGCATGTCCTGGACCTGGACAAG # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCCGCGGGGGTAGTTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 308004-311022 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSTP010000004.1 Streptomyces olivaceus strain FXJ8.012 Scaffold4_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 308004 28 100.0 33 ............................ CCCTTGAGCATCGGCATTGAGGACGAGGACCTG 308065 28 100.0 33 ............................ CTCACCCGTCCCGTTGCGGTAGGCCGTGGCAAC 308126 28 100.0 33 ............................ GATCATCAGCGGGCCGATGGGTGCCGGCACCAC 308187 28 100.0 33 ............................ CCGTGACAGGGGGAGGGGGTGTCGGCGCCGCGG 308248 28 100.0 33 ............................ CTGACGGCGGTCGCCCCGAACACGGTCCGGGCG 308309 28 100.0 33 ............................ CGTCGCCGCGACCCGTTGCGCCCCGCCGGGGCC 308370 28 100.0 33 ............................ CCCGTCCGCCCAGATCACCGCCGTCGAATACGA 308431 28 100.0 33 ............................ GTCCACCACTGCCTCCCCCAGGTCGTTTCCCCC 308492 28 100.0 33 ............................ GCCGCAGCCGCGTTCGAACCACGCGGCGACCGA 308553 28 100.0 33 ............................ CCCAACCCGGTCCAGTGCCTGTTCTGCGGCGGT 308614 28 100.0 33 ............................ CATCAACCCCGGCGACGTCACCGCCGGCGGCGG 308675 28 100.0 33 ............................ CTCGCCGAACAAGCTGGACAAGGGCAGCACGAA 308736 28 100.0 33 ............................ TCAGGCCCTCGACGCCATGACAGGCGTCCAGTC 308797 28 100.0 33 ............................ GCGGAAGGCCACTCCGGCGTCCGAGTCCACAAA 308858 28 100.0 33 ............................ CCACACCAGCCACTGGTGGGTCGGGGGATCCCT 308919 28 100.0 33 ............................ GGTGATTGAGTACCTCCGCCAGGACGAGGACGA 308980 28 100.0 33 ............................ CTGTCGGCGTACGCCTTCCCTCCGATGCCGGCG 309041 28 100.0 33 ............................ GTGGGACATCCTCGACCCGATGGCCGAAGCCAT 309102 28 100.0 33 ............................ GTCGGTGGTCCGCTTCAGCCCGTCGGCCTTCGG 309163 28 100.0 33 ............................ CCCCCACCCCGGCCGGACGGGCGCACCGGTACT 309224 28 100.0 33 ............................ TCGTGAATTACCCCCAGGTTCACCTCCTCGCCG 309285 28 100.0 33 ............................ CTGACAGACCGCCGTCTCGCACTCGGCCCCGTC 309346 28 100.0 33 ............................ CCATGAACGTCGGCGACCATAGCCGCAGATTTG 309407 28 100.0 33 ............................ CGGCCTGCCGACGGTCGAGGAGCGCGTGGGTCT 309468 28 100.0 33 ............................ GCCCGGCCTCGCTGAGGGCGTCGGCCGGGCTTC 309529 28 100.0 33 ............................ TGCGGTCACCGACCGTCCGGCGGGCGTCGAGGA 309590 28 100.0 33 ............................ CGCGCCCCGCTCCGGGGAGTCGTGGGAGGACGT 309651 28 100.0 33 ............................ CAGAATCCCTTGCTCCTGCCGACGCTTACCTCG 309712 28 100.0 33 ............................ CTGCACGGTGCAGGCCGGAACCAACGTCACCGT 309773 28 100.0 33 ............................ TCCGTACGTGGTGAGCGCGGAAGTCCCGTGCGC 309834 28 100.0 33 ............................ GGCACGGCCGCAGTCCAGGCGGCCCTGCGTAAC 309895 28 100.0 33 ............................ GTTCCAGGACCATTTCATCAACGGTGACACGGC 309956 28 100.0 33 ............................ TCAGCGCCACCGGTCGTGGCGCCGCCAGCTGGC 310017 28 100.0 33 ............................ CGCCCTACCCCACGCCCGCATCACCACCCAAGG 310078 28 100.0 33 ............................ GCGCCGCACCGCGCTGCCCGTCCTCGCGGACGT 310139 28 100.0 33 ............................ CGCGGCCACGAACTCCGCACCGCCCGCAACTTC 310200 28 96.4 33 .........A.................. ATGACCCCCGCCTCGACCATTAGGTTGCGCAGG 310261 28 100.0 33 ............................ CGCGTACAGGTCCTTGATCCACTCGGCTTCCGA 310322 28 100.0 33 ............................ GACGCCGGACTGTCGGTCGGCACGATCAGGAAG 310383 28 100.0 33 ............................ CTGGCCGCCCGCGCCCGGCTGCCCTGAGGCGAC G [310405] 310445 28 100.0 33 ............................ GTTGCTCGGGGCGGCCGCCGACCGCGGTACCGG 310506 28 100.0 33 ............................ CGGGCCGGACGAGAGGACCAGGGCGGCCTGGTC 310567 28 100.0 33 ............................ TCCGCATCCAGGCGTTCCTTGCCGAGGTACGTC 310628 28 100.0 33 ............................ GGGCAGCACCCTGACGCTGCCGCTGACCGAAGC 310689 28 100.0 33 ............................ CTTGCTCTCCCCCCGCGCGATCAGCAGCCCGTC 310750 28 100.0 33 ............................ TGCCGGCGTCGGCCACACCGCGGGCACCCTCGG 310811 28 96.4 33 .................A.......... TGGAGTTGTGGGACTACCGGATACGACTCGTAT 310872 28 96.4 33 .....................A...... GACCGTCACGGTGCTGAGCATCGCGTACGCCGG 310933 28 96.4 33 ...T........................ CGAGGACCCCCTATACCTGCGGGCCATCGCCCC 310994 28 75.0 0 ...........C.........ACGACC. | G [311005] ========== ====== ====== ====== ============================ ================================= ================== 50 28 99.2 33 GTCGTCCCCGCACCCGCGGGGGTAGTTC # Left flank : CCCCCATGCGCCCCAACGGCAGCCCCGCCGCCAGCACCGGTGCGGCCTCGGCCGCGTCCATGGCCTGGAACGCCGGGCATGCCTTGCCGCAGTCGTGGATGCCACACACCCACATGAACCAGAGCCGCCCCCGGCCGCCGCTGACCTCGTCCAACCGCCGCCGGAACGCGGGCGCCACGTACCGGTCCCACATCACGCCGGCCACGGCAGCGGTGTCCAGCAGGTGCCCCAGCAGAAGATGCGTTCGACCGTCATTGCGTGCGGCAGACTTCCCCCACAACCGCGACACCCGCTGGACGACCTCGTCGTCCAACTCCATCGCCCGCATCAACGCAACGACCGACCGCTCGTCCTCCACGCCCCGCTCCCTCCCCTGAACCGAGCCGCATGCGGCTAGTTGTGAAGGAACCGTAAACGGTGCCACTGACAATGCCCTCCCGGGCCAAAACGAAGTGAAGGAAAACAGGTACCCTCCCTCACATCACCGCAGCTCACGAAGT # Right flank : CCTTTCCCCCGTGCTGCGTCTCACATACCTGTTGCTCGACACGGAAGTTACCGCGGCAGGGCCCCGCCCCTGGCGCGGACGCCGGTCCACTCGCACCACACCACCTTGCCCGGTGACCGTTCCGCCACTCCCCACTTGTCGGCCAGTTCCGACACCAGCAGCAGTCCGCGCCCGCTCTCGTCCGACCGGTCGGGGGCCTGGGGTACGGCTGGCACCCCGTCCCCGCTGTCGTGGACCTCGACGCGCACACCGTCCCCGCAGGGCAGCAGCCGCAGCAGGAAGCCCCTGCCAGGTGGTGCGCCGTGCACCAGCGCGTTGGTCGCCAGTTCGCTCACGCACAGCGCCACGTCGTCCGCGCGCTCACACACACCCCAGTCGGCGAGCACCTCGTGCGCGAACGCCCGCGCAGCTGGGACGGACCGGCGCTCTCGGCGGTAGAAACGCTCACGTGAGGAGAGGGGTGGAGTTTCGTTGTTCACGTGACGAGAGTCACGCTCCGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCCGCGGGGGTAGTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //