Array 1 33524-32118 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016489.1 Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 33523 37 94.6 34 ..............G................G..... TTGGAATGGCTTTTGGGTTTTGGCGTCAATGTCT 33452 37 94.6 35 ..............G................G..... TCAGGGAAGTAGTTGTCGAACTCGCTCCCTGCTAA 33380 37 94.6 36 ..............G................G..... TTTTATTGATAAGTCCAACATAACCGTGAATAATAC 33307 37 94.6 34 ..............G................G..... AAGCCATCCCGCAGGCAAAAGCAATGATTAACAA 33236 37 94.6 35 ..............G................G..... TTTTCAACTTGATGGAAACAGGGCAAACCTCGCTG 33164 37 94.6 32 ..............G................G..... CCGGCAATGCTTTTGCTATTCTGGCAACGCTG 33095 37 97.3 35 ..............G...................... CAGAAGCTTCTGAGGGCAAAGAAGGCAAAACAGGA 33023 37 100.0 34 ..................................... TCAATAACCGAGGCTGTAACGTTGGTGCCCTCAT 32952 37 100.0 34 ..................................... TCAATAACCGAGGCTGTAACGTTGGTGCCCTCAT 32881 37 100.0 35 ..................................... ATGGATCGCTTAATGGATTCTCCGATTTCTCTGTT 32809 37 100.0 31 ..................................... TCGTGACCGTGGTTTGGAAATATCTTCCCTT 32741 37 100.0 36 ..................................... TAAAGCTGCTCTTTGAGATAAGCATTTTCTGCTTTT 32668 37 100.0 36 ..................................... TTGGGGAAAAACCACGCTAGGGTCTGGGTTTGGGAA 32595 37 100.0 36 ..................................... CCAAATTGATTTTAGTCAAGTATCCGGGGTTCTTTT 32522 37 100.0 34 ..................................... TCGCTCGATTGGTCGCGGGCATTGAGAAAGAATT 32451 37 100.0 38 ..................................... TTTGATTCAATTCTGTGACCCTCTTCAACTCTGTTTCT 32376 37 100.0 41 ..................................... TTGTTGGGCGGTAATCGCAAATACTGGGTAACGGATCGCAC 32298 37 100.0 36 ..................................... GTTGTTGGGGAAGGTTGCTTCAATACGAGAAAGGGC 32225 37 100.0 34 ..................................... ATTTTGCCTTCAGCGGAAAGGACGGCCTTAGCAG 32154 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 20 37 98.2 35 GTTTCAGTCCCGTGATCGGGATTTAGTGGTTAGAAAG # Left flank : GCACTCACTTATCTTTGATGCAGTGACCCTTAACCTACAAATCATTGGAGAAGCCAGCAAGAAAATCCCAGAACAAATCCGAAATCAGTATCCACATATTCCATGGCGAAACATCATTGGCCTGAGAAACATTATTGCCCACACATACTTTTACTTGGACGAAGACATTCTTTGGCACACTATCCAGCATGAACTGGAACCACTACAAAAGTGCATCCAGGAACTCTGGGATAAAGAAGCATAACTAACCAAGGCAAAACAGAAAACAGTTTAACCTTTGTCCTTCAACTTCCCGATGCAGTAAACCATAGTCATCATCGACATCAATGTCCAAGTACCATCAAAGCCTACGTTAATTCGATGGCGGAATTCAGCCTCAGACTCATTGGCGTTATATGCCTTAATGAGTTCCATGTAGTCACGGTAAACCCAGTAACTCCAAAAGATAGTAGAGGCCAGAAAGCATAAGGTAAAGAAACGAAACAAGTTTTAAGAAATAT # Right flank : TCCGCGAGCCAGGACTCTTACGATACCTAGCTTTGCAAAGCTCATTTGGCAGATGTCGCTCCATGCATCCAATTTTACCCATGATCGCTCTATAAATTGTTGACCTTTAAGTATTGAAAAGTATTGAGTTTTCAAGGTTCTAGAGGTTTTGGCAAAGTCCCTAGGATTTTTGGTCACGCTATGGGTTTGCCAATTTGATTTTAGGTCAAATCTAAAGAATGATGCTACCTGGTTTTTCTGGTGTAGATGTACCGTAGGCGATCGCCTTTTTAACAGCAGTGGCATCAAGGATATAGATACAGACAGCATCTTCATCTGGTTTGATCAATTTTTCTATCGAAGTTTGTAATTTTGCAAATTGCTTTGTCGTCAGAAAACATTCAAAAACACTAAATTGTTTCCAAGTGCCATAACCCGATAATAAATCAAACAAACGCTTGCGGCGCTTATCCCCTGCCTTTGTAGAAGGTAAGTCGTAAATGATCAGGTAAAAAAGAGTG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTCCCGTGATCGGGATTTAGTGGTTAGAAAG # Alternate repeat : GTTTCAGTCCCGTGGTCGGGATTTAGTGGTTGGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.00,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //