Array 1 1857073-1852710 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048272.1 Bifidobacterium asteroides strain ESL0447 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 1857072 29 96.6 32 ............................T GTCAAGCACCAATAAAACCCCAAATTATTCTC 1857011 29 96.6 32 ............................G TTTGCTACCATCGATCAGGTGAATGCAAAGGC 1856950 29 96.6 32 ............................T TCACAATCAAGCGATACGGAATCAACGTCGCA 1856889 29 96.6 32 ............................T GCCCAGGAATTTTACGCATTCGTTCCAGATCG 1856828 29 100.0 32 ............................. GACGACTCGTTCTTTTTTTTCTGAATTATTGT 1856767 29 96.6 32 ............................T AAAGGAAGCAAATGACAAGATAGATTCAATCG 1856706 29 96.6 32 ............................G GACCGAATTACCGAGACGCTATACAGCAAGTT 1856645 29 96.6 32 ............................G TTTTGATCCGAATGCACCCCTGAGCTTTCTGT 1856584 29 96.6 32 ............................T CAAAGTCTGTACGGTATGTACGTAATTGGAAA 1856523 29 100.0 32 ............................. TTGGACGTTGTTTTGTGGAACGCGGTCATATC 1856462 29 100.0 32 ............................. CACCTGAACCTTGATAGGCTTTTTCCAATCCT 1856401 29 100.0 32 ............................. AAGGCGACGATCTGGAACGAATGCGTAAAATT 1856340 29 100.0 32 ............................. TACTGATCTCACTGCTGATCCACAGACCAAAG 1856279 29 100.0 32 ............................. CATGGTTTTCCATGTATCGTTGCATTTTTACG 1856218 29 96.6 32 ............................T TATGTTGATGTTCGCGCTAAGGCAACATACGT 1856157 29 96.6 32 ............................G GCAGAAGCCGGCGATTACGTCGACGACTACGA 1856096 29 100.0 32 ............................. CGCAATACGGACAGAGGGGGTATGTATGATCG 1856035 29 100.0 32 ............................. TCCGAAACCGCACGCAGGCTCTTCGCCACGCA 1855974 29 100.0 32 ............................. CTGATGCGTCCGATATACTTTCTCCGCAAGGG 1855913 29 96.6 32 ............................T CAAGACTTATAGAGACGATCAAGGAGGCAAAT 1855852 29 96.6 32 ............................T AGGTTCAGATGGCACAATTCACCAATACGTCA 1855791 29 96.6 32 ............................T GCCCATTATCGTTTACCTCCATAGTAAGTGCC 1855730 29 96.6 32 ............................T TCTACAGCGGCATCCTGCTTGACAGTGACGGC 1855669 29 100.0 32 ............................. TGTTTGGTCAGCACCAGATGCTGCGCTTTATA 1855608 29 100.0 32 ............................. GGCGAAAGCGAGATGGCTTCCTTATGGTGCAG 1855547 29 100.0 32 ............................. CCGCAAAACTCCTTCATTACTAATTCGAGTAA 1855486 29 96.6 32 ............................T TTTCTTTGTTGACTACACTCGGCATATGACGA 1855425 29 96.6 32 ............................T AAATATGGTTTTTTGATAAGGAGTCTCGAATC 1855364 29 96.6 32 ............................G CAACATGGATTCGTACCGTGATGGGTCATCAT 1855303 29 96.6 32 ............................T CTGAATATGGGTTCGATAACTGACTGGATATC 1855242 29 100.0 32 ............................. TTCTTGAGTCCTGGACCCGCTTCCCGCGCCGG 1855181 29 96.6 32 ............................T TGCGCAGATGCCAATAAGGGCGGGGAGCCTGA 1855120 29 100.0 32 ............................. GTTCCAGCCATCGGGCATCGACTCCAAGAGGC 1855059 29 96.6 32 ............................G TGGGCGCTGACCGGCTTCTACGACACCGAAAA 1854998 29 100.0 32 ............................. CGGTACCTGCGGCCCTTGTCGAGGGGGAAGCG 1854937 29 96.6 32 ............................T AGCTTGGGTTGAACATCACCGGCCAGACCCCC 1854876 29 96.6 32 ............................T TCAGATTACCTTCGGTAGAAAACTGGAGCATA 1854815 29 96.6 32 ............................G GATTATGTTGATAAGGCTGTTGATGGCTTGAG 1854754 29 100.0 32 ............................. AAGGCTTGGCCTCGCCAGTGGGCTGAGAGAGT 1854693 29 100.0 32 ............................. GGGCCGAAATTGATGGTGAGCGGCGAGTCCAT 1854632 29 96.6 32 ............................T GCCCTCCTCAAGGAGATACAGCAGCACGGCGC 1854571 29 100.0 32 ............................. GCGAATTACGCCAGTTTCATGTACAGCGATAC 1854510 29 96.6 32 ............................T TCGTAGATGACCCCCCAGCGGTTGACGGTGCG 1854449 29 100.0 32 ............................. GTGGTCAGCTCACCATCAGCAAGCATGTCCGC 1854388 29 100.0 32 ............................. CGCAGGGTCGTTAACACGCTTAAACAGTTCCT 1854327 29 96.6 32 ............................T GGTCTTGGCAGGCAGCTCACGGTTAACCCAGT 1854266 29 96.6 32 ............................G TCGGTAGAGGTATCCACCAGCTTTGCGACGAT 1854205 29 100.0 32 ............................. TCGCAGAAGGTTCAGTCTGGTGATCAGTGGAA 1854144 29 100.0 32 ............................. CCCACCAACATCCGGCAGGCACCCACATATGT 1854083 29 96.6 32 ............................T CATGTCCGCGACAGCGTCAAAGGCCTGGGCGA 1854022 29 100.0 32 ............................. ATGACATTCCCTGATGGTGAGAAATTGTCAAC 1853961 29 96.6 32 ............................T TTTCGACAGCGATGGGAACATTATGAATAATG 1853900 29 100.0 32 ............................. TCTGTGTACCACTTGCGCGCGGTGGGATCGCC 1853839 29 100.0 32 ............................. GGGGTGAACACGTGCGTGTTGATCCAGTTCCA 1853778 29 100.0 32 ............................. CAGAAACTGAACCAGATCTACAACAAACTGGG 1853717 29 100.0 32 ............................. GCGATAAGTGGTTCGACGCTTTGGATGGCGAC 1853656 29 96.6 32 ............................G CACATCATACCCACAGCCATCATAGCCACCAT 1853595 29 100.0 32 ............................. CTATACAATGTCACCGGCTGGTAAACTGCCGA 1853534 29 96.6 32 ............................T ATTTGGCCAGCGAACTGGCGCCGATGCTTGCT 1853473 29 100.0 32 ............................. ATGACATTCCCTGATGGTGAGAAATTGTCAAC 1853412 29 100.0 32 ............................. TGAAAGTCTGTCCTGCTTGCCTTGAGGATTTT 1853351 29 100.0 32 ............................. CATGTGTCCATCATCGCCACGGGCCCCTCGGA 1853290 29 96.6 32 ............................T GAGCATCTTCGCCAAGCACAACAGCGACACCC 1853229 29 96.6 32 ............................T AGATACAACGGCGTTTATCAGCCAGCGCGCGA 1853168 29 100.0 32 ............................. TGACGGGCAAGTGCTTAAGCGTTTGCTTCGTG 1853107 29 96.6 32 ............................T GGCACTACGGCACCGGTGTCAAGGCTATTCAC 1853046 29 100.0 32 ............................. CGTCGGGACCCCGCCCGAGCCTGGCCCGGGCC 1852985 29 100.0 32 ............................. AATTTTGCCGAAAATATTAAGAGCGAAGCTGA 1852924 29 100.0 32 ............................. AGAGTCAGGCTTACGTGCGTCTACTGCATATC 1852863 29 75.9 32 ......TT.A...C...A.C.......T. AGCGCCGCTACCTGACAGTGCACCGCACTGCA 1852802 29 89.7 35 .......T.....C..............A GTGTACTAGGGTCTGGACCGCGCCGCCAACTTTCC 1852738 29 65.5 0 A......AT....TG..A.A...A..T.T | ========== ====== ====== ====== ============================= =================================== ================== 72 29 97.4 32 GTGCTCCCCGCATACGCGGGGATGATCCC # Left flank : GGCCACGTCACCGCTAGAGTTCGGGATCGACTTTGGGAACGCATCACGGGGCAGATCCGAACTGGCAAGGCAATTATGGTCTATTCCGCCCGCAATGAGCAGCATCTGGGCTTCAAGGTGCATCGCTCGGATTGGGACTCAGTTGACTGTGAAGGATTGGCTCTTATGGAGAAGCCTGCTGATGGCGGCGACGGCAGATTTGCAGGTGGGGGAAACCGATACCGTCGGACTGGTTGGAGCAATGCCAGCAAGTACAGACGCGCGGCAAAGTTCAGACGTTCTCGTTCTGGCTGAATGCAACCGCGCCTGTACTTTTCAAATGAGCTTTGCCGATGAGGGCCAAGCACTGGCTACTGTGTAGGTGCATGGCTAAGGAGCTGAGTGCAGATGGTCTAAATTGCAGTGGCTGAGACGGAAAAAAGAGGGGGGTTGAAATGTAAACTGATTAAAAATCAGAGATCTTGTCTATCATATTGTTGGGATTGCAAGGATCTTTAAGT # Right flank : AAGCCCCAGCACTCACGGGAGATATAAGTGCTTCTCGCATTTGTGATGATAAATAATTCTTGATTTTCACCGTGCTTCCATTGTTCCTTCTTATTGGCATTCTGCACGCGTTCTGCTGGATGCTGCTTGTGTGCGATCGGCTTTGCGGTTGCCGTGGTTGTTTCTTTATGCCAGCGCTGTGAACGTGAAAAGACCGATGGGGAATTCCCGATGTTTATTAGGTACAGGTAGGTTGGTTGATGCTCATGTGTTCAGATACTCTCTGAAGGGTTCAAGATCAATAAACTCATGGTCGTTGGCCATCTTCCTTACTTGGGCTGGGGAAAGCCGCATCAGCTTGGGTGACCGCATACGGCGTCGAGCACGCTCTCGATGGCTGCCGGCGACTTACCTGCTGTGAGAGCATCCTCCGCGTCGTCCTCGATGTATGTCCAGGCTTTGTCGGGCAACTGCCATCATGGCATCAAAGCTGATGTCAGTCATCCATGTCCTCCTTTCAG # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCATACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //