Array 1 5091-4401 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QEIS01000153.1 Staphylococcus pseudintermedius strain ST497 6 41_S41_L001_R1_001_contig_153, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      5090	    36	  97.2	    29	............................G.......	AATGTGCTTTTATACGTTGTTATCAGTTG 	
      5025	    36	  97.2	    29	............................G.......	ATTTTGTACCGAATAGCGTTTCAGGGCGC 	
      4960	    36	  97.2	    29	............................G.......	TGAGCCTTTATCATTTAAACAGCTAGAGT 	
      4895	    36	  97.2	    30	............................G.......	ACAATACTTGATGCAGGCAATAACAAGCTG	
      4829	    36	 100.0	    30	....................................	ACAATACTTGATGCAGGCAATAACAAGCTG	
      4763	    36	 100.0	    29	....................................	GGACAACAACAAGATATTGCTCAAGCCTA 	
      4698	    36	 100.0	    30	....................................	TTTCCTTCGTGATTTCTTCTTCTACTTCGA	
      4632	    36	 100.0	    29	....................................	GCTAAAAGTCAATGTTACTTCATTCCTTA 	
      4567	    36	 100.0	    29	....................................	TCACAAACCGTTTATGAAAAAAATACATC 	
      4502	    36	 100.0	    30	....................................	CGAAAGTAAAGATAGTATGCAAGGTGCAAG	
      4436	    36	  80.6	     0	..........................AC.TC.TC.A	|                             	
==========	======	======	======	====================================	==============================	==================
        11	    36	  97.2	    30	GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC	                              	       

# Left flank :   ATTTAGAAAGAGGTAAAACGGAGAAAGCTTTGTGTCGACAGATACTA
# Right flank :  CCTTCTTTATAATCGTACATCAACCTCACTATGCTTTCAAAATAATTAAGAGGCATTGTGGGCTTTTTGTGTTTATACGAAATGTTGTATGAATCTCTCAATCGTGCCACCATGTTATAATAGGTATAAATTGTTCATAAAAGATAAATAGAAAGTAGGGGAAATCTATGGAAGCAATTATTGCAACTCAACCGTTCCAATTAGCAGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGCTCCCAACACCAGAGGCGCATGATATTTTAATCAAAGTGTACGCAACAGGGATCAATCCGGTTGATACGAAAATGCGGCAAGCCCCGTTAAATGCTGAGGCACGTGTCCTAGGTTTTGATGCGGCAGGTGTGGTTGAAGCGGTCGGCGATGCGGTTACGGATTTCAAACCGGGTGACCGAGTATATTATTCAGGATCGAATCAACGAGATGGCTCAAATCAGACGTATCAGCTCGTGAATGAAAATTATTTAGCGCATATG

# Questionable array : NO	 Score: 6.12
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC
# Alternate repeat :   GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,-0.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [66.7-51.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,4.91   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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