Array 1 118748-117741 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQTJ01000036.1 Streptomyces sp. ScaeMP-e48 YUYDRAFT_scaffold00004.4_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 118747 29 100.0 32 ............................. CGGCCAGGCATCCGGGACCGCATCAGCTCCCA 118686 29 100.0 32 ............................. GGGGCGAGCTGGGCGCGGAGGGCGACCACCTC 118625 29 100.0 32 ............................. GCGAGGCCCTCAGGGGGCAGGGGCACGATGAC 118564 29 100.0 32 ............................. GGGCTGTCCGGTGCGCCACGGTGGAGGGGTGG 118503 29 100.0 32 ............................. TGGTCGTGCGGGGTGGTCATCGGGCGTGCTCC 118442 29 100.0 32 ............................. CGGGCGCCCGGCCGGCCCCGCTGTCCCGGCTG 118381 29 100.0 32 ............................. GGAAAGCCCCGGCAGGACGAGGTGGTGTCCTG 118320 29 100.0 32 ............................. CATCCGCCGTCGGGGCCGGGCTGGACTGCGGC 118259 29 100.0 33 ............................. GCGCCCGCGCCTCCTCCTCCCCCGGGCCGGGCT 118197 29 100.0 32 ............................. GTGGCCTGAGGGGCACTGCCCGAGGGGGCCTC C [118188] 118135 29 100.0 32 ............................. TGGCGCCACTCGGTCGGGTAGTCGGAGTGCGG 118074 29 96.6 32 ..................A.......... TCGGCCGCCAACGACGCAGACATGTCGCCATA 118013 29 100.0 32 ............................. GCATGTACGACCTGCCGCCCGACCTGGACCGC 117952 29 100.0 32 ............................. GGCCGGGTCGCCACATCCGTGATCGACCCGTT 117891 29 100.0 32 ............................. ACTCCCCAGGCAGCGGGATACCGGTCCTCGTC 117830 29 82.8 31 .C..........T........C.CG.... GCTGCCCGGCGGCCCCGGTGGTCAGGGTGCG 117770 29 75.9 0 ..............CC...T.CC.CC... | C [117768] ========== ====== ====== ====== ============================= ================================= ================== 17 29 97.4 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : GAGACGACGGACGTGGGCACGGCAATAGCCGGCGAATTGCAGCTGATGGATCCCGATGTGCGTGCGTCACGGTCACTCGCCTAGCGGCTCCTCGACCCGGAGTTCATCGAGGTCGGGGCTTCGGGACGGCGGTGGACGTATGAGGAGATGCTCGCCGCGCCCCCGAACTGAGCGGCGGGGACGTGGACGGCCCGCGCCACGAGACATCCAGCATGACCGGTGTCGTACTGGCCCCAGGGGTGGTGCACCTCACCTACGAGAGTGTCCTCGGCGGCAACCGGGCCCGCCGGAGTTCGCTGTGGCGCAGGAAGCACGGCGAGACGGCGTGGCAGATGTACTACCACCAGGCGACGCCTGTCCCGGCGGGTGAGGGGCAGAATCGCTCCTGATATGCACGGCTTCCAGCGAAGACCGTTCGCGGCACGGGGGGAGATATGTCCGTTTCTCAAGAAGTAAGTAAAAACAGCCCATCGGCCGCATAAACCCGCAGGTCACGAACT # Right flank : TCACACCCCCGTAGGCGGCGGCACCGCCGCAGCCCGCAGGCCCAGGCGGTCGTGCTGGTCCGTGATCTCCGTCGGGTGGGCGGCCAGCAGGCGGCCCGCTACCGGGAGGGGCATCCGGATCACCACCGGGCGCGGGAGCGTCAGGTCGCGTTCCGCCACCTCCGTACGGGAAGTGCGTACCCGGTTCGTCACCCGGGCCACCACCCTTACGTCCAGGGTGAACTGCACCAGCACCGACGTGAACTTCGGTTTGTGCAGGGGCATCGAGCCCGCTCCGTTCGCCGCAGCGCCGCTCGCCGAGCCCGCTCCGTCCACGTTGCCCATCAGCTGGTTGAGGCGGAACTGGTCGGCGTTCAGCACTCCGGCGCCGAACAGGCCGCGTGCCTGTCTGCTCTGCTCGGCCTGGCTCTGGCCCTCCGTCTGGGTGGGGCGGGGCGCTCCCAGGCTGCTCTGGGCCGCCGTTTCGAACGTCATCTTGTCCCCGGCCCCCAGGATCCGGC # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 125666-124662 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQTJ01000036.1 Streptomyces sp. ScaeMP-e48 YUYDRAFT_scaffold00004.4_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 125665 29 100.0 32 ............................. AGGTCGAACCAGGCGTCGTGGCGGTCGTTCCA 125604 29 100.0 32 ............................. CTCTGCTGGGACTACGGCCGAGCCGAGCCCGC 125543 29 100.0 32 ............................. CGGCCAGGCATCCGGGACCGCATCAGCTCCCA 125482 29 100.0 32 ............................. TAGCGCAGGCCACCTACGCCGGCATCCCCATC 125421 29 100.0 32 ............................. ACTGAGCGCATCGGCCGCCGCATTGCGTACTG 125360 29 100.0 32 ............................. ACGGCCAGCTCCACGATCCGGGCGTCTTCACC 125299 29 100.0 32 ............................. CTCGGATGCGTCCCGGCTGCCGTCGTACGTGG 125238 29 100.0 32 ............................. AGCCAGGGGATGCTCTACCACCTCACCGGGAT 125177 29 100.0 32 ............................. AGGTCGCCCTCGAACCGGGACGGGCCCCCGGT 125116 29 100.0 32 ............................. TGGCCGGCCGCCGCGGCGACCTGGCGGGTCTT 125055 29 100.0 32 ............................. TTGGAGGACCTGGAGGGCAAACTCGCCACGGC 124994 29 96.6 32 ........................A.... GGCCCCTACGTCATGGGCTTCACCACCAGCTT 124933 29 96.6 32 ........................G.... AAGGGAATCCGGGGTGTCTGGAATGCCGTCGC 124872 29 89.7 32 .....................AC.G.... AGCAGAGCCGCGGCCCCTGTCCGTACGGGTGG 124811 29 89.7 32 ...........T.........A..G.... TCCACGGCAGCGGCGGGCTGGTCCTGGTTGGA 124750 29 96.6 32 ............T................ GACCACTCGGTCGACGCGCTCCGGTACGGCGT 124689 28 89.7 0 .....................A..G-... | ========== ====== ====== ====== ============================= ================================ ================== 17 29 97.6 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : CACCCAGCCACTGCTCAAGCCGCCCCTCCTCCTCCAGCAGATCCCACTCGTCCTCGTCCAGCAGGTCGGCCAGCTCTTGGTCGGAAGCCTCGTTCTTCATGTACCGCTCGTCGTACCGCCCCAGGAAGCCACGCCATTCCTCCGGCGTGGTCAGGGTGTCGGTAACTCCACTGTCTGCAGCCTTGGTTGTCTCATCCATGCGGTTCATGCTCGCAGGCCCCTATGACATCGCAGCCGGGCCCAGGGCTGGCCGCCGAGACCCGGCACGACCACCCGTACCGGCGATAGGGGCGATCACCCGCTGCCACCCGGCCGAGGGGACCACACCAACCGGATGCGGTTGGCGCTCGTATGCCACAGGCGGTGTCGAAGAGGGGCAGAATCAATCCAGAAGTATTGGGCTCAAGTGGGGGCTCTTTGCCCGACGAGGGGATATGTCCGTTTCTCAAGAAGTAAGCAAAAACGAGCCTCCGGCCACATAAACCCGCAGGTCACGAACT # Right flank : GCCAGGCATCGGCGAATCGCTCGCCAGGCACCGAGCACCGACCACACGTAACGCCGCCCTCCTTCAACTCGTTGTCGCCAGAGGCTAGAGACACGGGTGGTCGACGCCCGTGAAAGCCCAGGAGGCTCGGGAAACATGATCGAAGAGGGCGACGGCGCCGGGGGATGCCCGGCATCGCGGGAGGAGCCGCGCGTCGCGCACTCCCGTACGCTGCGATTCTGGCTCGATCCGGCGAATATCGCGGTGCGCCTCGGTCAGGCAGGCCCCGTCGTCAGGACGAAGGCCGGACCAGCGGTCGCCTTCCAGGTCAACGACCCGTCGCTGATCCGCAAAGTCGGCTGCGGGGAGGACATCTTCCAGGCCTGGAGCGCGGACCCGTGCCTTCGGGACTTCACCGGAGACGGCTTCGCCGGGGCCGAGGGCCAGGCCCACCGGGACCGGCGCGCGCTGATGAAACCGGCGCTCGCGGCGCCCCGTCTGACGGCTCTGGGGCCGTCCGT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //