Array 1 4616998-4620326 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034655.1 Xanthomonas campestris pv. musacearum NCPPB 4379 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 4616998 31 100.0 33 ............................... AGGCAAATGCTTGCCTGGCGATGGTCAGTGCGC 4617062 31 100.0 34 ............................... CCTCTGTGGATCTCGCTCGCTATCGGCCTCCTGT 4617127 31 100.0 34 ............................... TGCCAGGGCGCGCACACTCTTCCTGTCTAGACGC 4617192 31 100.0 35 ............................... CACCACCAATCGACTACACACGCCGACCGGTGCAA 4617258 31 100.0 36 ............................... AAGCATGGCGATGTGGTTCGCGACTTCCGCGTGCGG 4617325 31 100.0 36 ............................... GTCAGGTAAAGGGTCTGCTCTGCCTTTGCATACAGG 4617392 31 100.0 35 ............................... AGGCATACACAGGAAACTAGGGATAAAATAAGTGC 4617458 31 100.0 35 ............................... TTCACCTAGGCTCCTACCCCACCGCTGACCTGGCC 4617524 31 100.0 35 ............................... GCTCCTCCACAGCCTTAGTTGAGTCATGGCATAGC 4617590 31 100.0 34 ............................... CAGTTCTACGCAGAACACGAAACAATGACGACAT 4617655 31 100.0 35 ............................... CTTTAGCAGGCGTTCACCACTCTCTTGATCATATG 4617721 31 100.0 33 ............................... CTGGTGTGTCTGTCTACCTTGGTAAGAGTTGGC 4617785 31 100.0 37 ............................... CAAGTCCACCTTGTCATAACCGTACCGATTCGCACCG 4617853 31 100.0 35 ............................... AACCAACGCAAGTCTTCCGGGGCGTCTGGATCTGC 4617919 31 100.0 36 ............................... CTGAAGCCCTGCCAGGTTACGTACCTTCCGAAGGGA 4617986 31 100.0 35 ............................... CAGTCCTGAATAATGTCCTCATGCCCAATGAACTG 4618052 31 100.0 37 ............................... CCTTGCGTTCGCCTGTCTTTGGGTCTCCCGTCCAGTG 4618120 31 100.0 35 ............................... AGATTTTGGCGGTGCATCTGTTGTACTCCCTCTGC 4618186 31 100.0 34 ............................... TGGGCATTGGACAACCATCAGCCCCTATGCAAGC 4618251 31 100.0 35 ............................... CCACTGTGGCAGGGCCTTGACATAACCGGGGAAGC 4618317 31 100.0 36 ............................... AGTACAGGTCACTGCATAGTGCCTACTGCAGTACGG 4618384 31 100.0 35 ............................... CAATATGGAGAGTTCCTGATGGACTACCTAGTTGA 4618450 31 100.0 34 ............................... TCGCCAGAGAGCCTTACCAGCGAACTTGCCGTGG 4618515 31 100.0 35 ............................... AAGGTAAGCACAATGTGGTTGAGCAAGATCTGTCC 4618581 31 100.0 34 ............................... TTAGCAAGCATGCCAACGTAGAGGTGGGCCTGAA 4618646 31 100.0 34 ............................... TTAGCACCACCAGCAAAGCGGGCTAGCTGATACT 4618711 31 100.0 36 ............................... AGGCACTGCACTGTCCCAGCCATTGGGGCCCTTTGA 4618778 31 100.0 35 ............................... TGGCGGATTAGCTCCCCCTTAGCTGTATCCACGTA 4618844 31 100.0 32 ............................... ACAAAATAAGGAGGCCCTATGGCCGAGCAAAA 4618907 31 100.0 35 ............................... TTTGTCGGCTTTTTCAGCAAGGGCAAGCAGGAGAC 4618973 31 100.0 34 ............................... GAGCTATGCGTGTTCGAACCAGTGCCAGTACACA 4619038 31 100.0 36 ............................... AGCAATGTGGATTCGCAGGCTGGCGGCTCGTTACAG 4619105 31 100.0 34 ............................... TGGGAGACTGTCAGACAATAAGCTGGTGCTGACG 4619170 31 100.0 35 ............................... TGCAGGATGCACAGAACCACCAAGCATGGATGCAG 4619236 31 100.0 35 ............................... CTAAGTGATAGCGAAGAATGCAGGCGGCTGACCTA 4619302 31 100.0 37 ............................... GTGTACACATCTGCCGCCCCTAGGTCCGCAGAGGCAA 4619370 31 100.0 35 ............................... AAGACTTGGTACTTTGACGAGAGTGCAGAGGGGTG 4619436 31 100.0 35 ............................... AAGACTTGGTACTTTGACGAGAGTGCAGAGGGGTG 4619502 31 100.0 35 ............................... ACTCTTTTGTACCAGCAGCGCATCATTCTGCGCCA 4619568 31 100.0 34 ............................... CTGTGCTGCATGGCGCACGCGAGATTGCAGAGTT 4619633 31 100.0 35 ............................... TTTGTCAAACATGGTAGCGGCCTCCGTTGGTGTAG 4619699 31 100.0 33 ............................... ACCTTTGCAACCCTTACCAGCATACAGGCCGAT 4619763 31 100.0 36 ............................... ATCCCCATCCTCGTTTTGTGTGGCCGGTGCGGGCCG 4619830 31 96.8 38 .....................C......... GTCTCGCTGGCGACGTTCTGGCTGCTGCTGCCCACCGG 4619899 31 100.0 35 ............................... TCCTCCGGAGTCATGGTTGCATCCCCGGCTTGGCG 4619965 31 100.0 35 ............................... GTTTCCAAGGTCGCAGCCAACGTCACCCGCATCAT 4620031 31 100.0 37 ............................... GTTGATCAATATGGCTCGGCTGCGGAAATAGTGGATG 4620099 31 100.0 35 ............................... AGGCACGAAGGCGCCCGGCGTAGCCTCGCGCTCAA 4620165 31 100.0 35 ............................... TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA 4620231 31 93.5 34 ..........GC................... AACGGCCCGTTGATGATTCGGCACGTGGCGCAGG 4620296 31 90.3 0 .............A.A.....A......... | ========== ====== ====== ====== =============================== ====================================== ================== 51 31 99.6 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : AAATGACGCGACTCAAGCCCCATGATGATTCTTGTCAGCTACGACGTCAGCACCAGTTCTCCCGGCGGCGAGAAGCGCCTGCGCAAGGTCGCCAAAGCCTGCCGTGACCGTGGCCAGCGCGTGCAATTCTCGGTCTTCGAGATCGAAGTCGAGCCTGCCCAATGGACTGAATTACGGCAGCAGCTATGCGACCTGATCGACCCGGCCCTGGACAGCCTGCGGTTCTATCACCTTGGCGCGAAATGGGAGACCCGCGTGGAGCACATCGGCGCCAAGCCCAGCCTGAACCTCAAAGGCCCACTGATTTTTTGACGCGAACCCCAAGCGCCCCATAAAAACCGGGCAGGTTCGCAGTCTCCTCAAGCAACTGATTTGCAACAAAAAAATAAATAGACAGCGGATTCACGGGGCCGCATGACGACTTCTCGACTGCTTTTTTCAGCAAGTCCGCGCAATTGCCCGTGTTTTAGCAACGATGGCAAACACTTATGCTAAGGGGG # Right flank : CACTTTAGACTCGCCCGCCAGCCGGACGCTGACCAGGTGCAGGTTGGAGACGCTTGAGGCCTGCATGTAGCACGGATCAATACGCACGCAGATCAAAAATTGGGCTCCGTCCATCAACGCTTGAGCACCATTATTTGACGATGATCGTCTGAGGCGTGCCTGCAAGCTTCCCGTCCACCATCACCTGCGCGGTGTAGGTGCCGGCCGGCCAGCCATCGGGCTTGCTGAAGCTCAGGTTGGTGGTTTCGGCACCGGTGGTGTTCAACGTCGCGTTCTGTTCGCCGGCCACCTGGCCATCCTGGTAGGCCAGCTTCGCCGACAGGGCCACGTTGCTCGCGCTGCCGTCGGTCTTGACCGAGACGATGATGGTGTCTTTGCTGCCGACACTGGTGGCCGGCGTCACCGTCTTGTCGGCTGCGGCCTGGGTGCCGACGGCCACGCTGGAGACCGTCACTGCACTACCCGTCGCAGCGCCGCCATCGGTGCTGGCCGCTCCGGTG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //