Array 1 178305-181066 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT632614.1 Legionella pneumophila strain ST62 isolate ST62 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 178305 37 100.0 34 ..................................... CATCAACCGGGTTAGCATTAGCATAAGGCGCATC 178376 37 100.0 35 ..................................... AAGAAAATCAATAAATCCAAACAACCAACGAATGT 178448 37 100.0 36 ..................................... CTTCATTGCAGGGTACAGTTGAAAATTCCCTTACAG 178521 37 100.0 34 ..................................... TAAATGAATTTTCAATGATTTTAGCGGCTTCGAT 178592 37 100.0 33 ..................................... CCGGATAAAATCGGCAAGGCTTGTGGGTGACGA 178662 37 100.0 35 ..................................... CTTTGAAAAGGCTCATACCTTGTTACCCCTTGCAT 178734 37 100.0 33 ..................................... AGAGTGATCACTCTTGAAGATGCTCTTGGTTGG 178804 37 100.0 30 ..................................... TGATAATTTAAGAACATATAATAATTCTTT 178871 37 100.0 33 ..................................... ATGAATAAAAATGTCTCTAACATGTCAATTCTC 178941 37 100.0 35 ..................................... TACAATTAAAGTATATGAAGCATTCAAAGATTTCT 179013 37 100.0 36 ..................................... ACTTTCACTGTAACAAGAAACGCCGACGGCAGAGGC 179086 37 100.0 35 ..................................... TTATATTCTCCACGTTCATTATTTGTACAATATGA 179158 37 100.0 35 ..................................... TTCCATTCGGCGGCACGTTCGCTGGTTGGATCAAC 179230 37 100.0 35 ..................................... AATATAACACCAATGATTCCGGTATAAATCACTAA 179302 37 100.0 36 ..................................... GTCTCTCCAGAAGAACAGGCCAAGCGAAATGAAGAT 179375 37 100.0 34 ..................................... TTTAATGTTCTTTGTGCAGTCATTGATTCAGGTA 179446 37 100.0 35 ..................................... TTATCGTCTATAACTACTAGACCGTCATCAGTAAC 179518 37 100.0 34 ..................................... ATAATACGGTTTTGTAAGCCGTCTAATTCACGTG 179589 37 100.0 35 ..................................... TCTATTAACAGCCCATTAACTGATCGACAAGGACG 179661 37 100.0 33 ..................................... ATTGCAAGCGGGTTTGATCGTGTTATTATAAGA 179731 37 100.0 34 ..................................... TTTATTTAGTCGTTTAGAAACCATGCGCCTCAAT 179802 37 100.0 35 ..................................... GTACTGGCCGACCAGACTACGGTACTTCCTGATCC 179874 37 100.0 35 ..................................... AAAACTTTCATTTGTTAAATTACGCATTTCATTTA 179946 37 100.0 34 ..................................... ATAGTTAGAAGATTTACTCTAGGAGTTTATTGGC 180017 37 100.0 35 ..................................... TGTAGCGAAGGCGAGGTTCCATAATGTATAAATTT 180089 37 100.0 34 ..................................... GTGCATGGTTTGCGCTTTGCAACCCTTCCGCTGA 180160 37 100.0 35 ..................................... TTGTGGTTATGCTTGTTCCTGTACGTGCTGTTACT 180232 37 100.0 35 ..................................... TCATAACTCTATTCAAATTGCCAAAGTAAGCAATC 180304 37 100.0 37 ..................................... TCAGTACAGCAGCTTTAATCTCTGCAATCGCCTTAGA 180378 37 100.0 35 ..................................... CTCTAGCCCGTCATATTCTTCAACTACCCAATCTA 180450 37 100.0 36 ..................................... TTTTGAATGTCTGTTTCAGTGTCGAAACTTAGTAAT 180523 37 100.0 35 ..................................... GCATCTTCTGAATTAGCCACGTCTTCAAGACTGTT 180595 37 100.0 35 ..................................... TCTAACTAGTTGAGGCGCTCTAGCTTTTATTTCAG 180667 37 100.0 35 ..................................... AACAGAAAACATGCACAGAAGAAACTGGAAAGCAG 180739 37 100.0 35 ..................................... CTTCCTGAATTAAACTTATTGTGTTAACTTTTTCA 180811 37 100.0 34 ..................................... TTGCTGATGCTTCTCTAGCTGCTGATTCTTGTAT 180882 37 100.0 36 ..................................... CATAATTGGGAATTGGTGTGAAATGCTCACCGTCCG 180955 37 100.0 38 ..................................... TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 181030 37 86.5 0 .......................TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 39 37 99.7 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //