Array 1 407431-402417 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFOF01000001.1 Acinetobacter baumannii strain 4300STDY7045886, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 407430 30 96.7 30 .............................C CGCCTGCATCTTCACCACCTCCAGCTATTC 407370 30 93.3 30 ............................AC TATGACAATTATCCAATTCATCAAAGATTC 407310 30 93.3 30 ............................AC TATGACAATTATCCAATTCATCAAAGATTC 407250 30 96.7 30 .............................A ATTTTCGTTCATCAGCAATAGAAACAACGT 407190 30 93.3 30 ............................AA TATACTGAACTGTCGAAACGCTTATTACTT 407130 30 93.3 30 ............................GA AGAGAACAATTGCAATGCCTAAAGCCCATA 407070 30 93.3 30 ............................AC CTTCGGCTTCAGAACCTCCGCCGATTGATC 407010 30 93.3 30 ............................GG CAATTGTTGGTTAAAGTCAATTTCTACAAG 406950 30 93.3 30 ............................GA TTGCGCCTTGTTCTTTCTCTTTATCTGAAT 406890 30 96.7 30 .............................C CGCCTGCATCTTCACCACCTCCAGCTATTC 406830 30 96.7 30 ............................A. CGTCATTCTTATGAACCGAACGCGAAGCAA 406770 30 96.7 30 .............................G TTGGTGGTGGTGGTTCTGCACCAGATATGA 406710 30 100.0 30 .............................. GCGAGTCAAGCCGACAAAGTAATCGCTATG 406650 30 93.3 30 ............................AC GGTGTCAGAGTTTTAGAACTCAATGATGGC 406590 30 93.3 30 ............................AG TTAATACCCGTTGGCCATATTGTTCAGTTT 406530 30 100.0 30 .............................. AGTCGCATTAGCGCAAAAGCTACGTGGATT 406470 30 96.7 30 .............................A ATGATGAAATCGATGAAATGTGGCGCTATG 406410 30 100.0 30 .............................. GTTGCAACACCGCCACCGCTGTGCCTTTTG 406350 30 100.0 30 .............................. CAATGTGTTTAAGATCGGGTCAAAAGCTAC 406290 30 93.3 30 ............................CC CAACTTTTTAAATATTTAATTCTTATAAGA 406230 30 93.3 30 ............................AA CGAGAAATTGGAACTACAAAAGAACCAAAA 406170 30 93.3 30 ............................GA TTATTCTGGTTATAACTTTGTCTGTGTAAT 406110 30 96.7 30 ............................A. CTTCCGCAATGGCCTTTTTGAATGCTTCAT 406050 30 93.3 30 ............................AG CCACGTCAACAGCAGCATTGGCATTAGTAA 405990 30 93.3 30 ............................GC TAAAGGCTAAAGCAACCAAGGTGAATCTTA 405930 30 93.3 30 ............................GA CGAGCAACACGTCAACGAACTCAAAGCAAA 405870 30 93.3 30 ............................GA CATGGCGAGTTGCAGCAGGAATACCATAAT 405810 30 96.7 30 ............................A. CTTGAGTTCAAATAAACGGACAAATGGGAT 405750 30 93.3 30 ............................GA GTAATGCAGCACCAACAGCAGTAATCGCAG 405690 30 93.3 30 ............................CA AACGTGGGTTACATCTAGTTGCCTGAGGAG 405630 30 96.7 30 .............................A ACTTAGACTGAATATCTGATGCTAAAGATT 405570 30 93.3 30 ............................AG CCGGTGTTGATCTGATATGCGTTAGCCATT 405510 30 96.7 30 ............................A. ACGCGCCAAACATGAATGGGTTTAAAACGT 405450 30 100.0 30 .............................. TGTGCCTCAATATGATTTCAAATATGGTTT 405390 30 93.3 30 ............................GC CAGGGGCAACATACCGCGCTAACGTTAGTG 405330 30 93.3 30 ............................GC AGTATTGACTGTCGGACTTGTGACAACCTG 405270 30 93.3 30 ............................GA CAGGAACCGTCACTGAAAGCGCACAGGCTC 405210 30 100.0 30 .............................. GTTTCAGTTGCATAGTCAAACGATGAGAAC 405150 30 96.7 30 ............................A. TAGCAGGTGATTACGCAGTCTTATCTAATG 405090 30 96.7 30 ............................A. TAAGCAAGGGCTGACCCCGACCGCCGAGCA 405030 30 96.7 31 ............................A. TGACTTACAGCGTTATGAGAGATCCCTAGTT 404969 30 96.7 30 ............................G. AAAAAAGAACATTTCCCGCCAAAATTGACG 404909 30 100.0 30 .............................. TGGCAACCAGTCGCCCTATGCGACCTGATA 404849 30 96.7 30 .............................G TAAAAAAGTTTAATAATTTTTTCAGTGAAT 404789 30 96.7 30 .............................A CAGCAATAACGACCAAACCGATATAGGTAA 404729 30 96.7 30 ............................A. ACGAACATCATTTACTTGCTGAAGTTGCTT 404669 30 96.7 30 ............................A. TGGGGGTACTGCTGCTGAGGTCATTCAATA 404609 30 100.0 30 .............................. GTAACAACTTTAATGGAGAAGCCTTAATCT 404549 30 96.7 30 ............................A. AACGAGAAGCGTTGCGTAGACTTACAACTC 404489 30 96.7 30 .............................C TTGTTATTTCTGGTAATAAATATCAGAACA 404429 30 96.7 30 .............................C AAATCTAAGCCATGCTCATTAGGCATAGGT 404369 30 96.7 30 ............................A. CCTGTCTCTTGGTCAATCTTGGCACGTAGG 404309 30 96.7 30 ............................A. TACCGACTGATTGTTGAGTGGCAATGTTAA 404249 30 100.0 30 .............................. ACACATGAAGTCAGCAAATGCCACCATGTT 404189 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 404129 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 404069 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 404009 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 403949 30 96.7 30 .............................G ATGCGGGTTGTCCACCAGTTATGACTACTT 403889 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 403829 30 93.3 30 ............................AG TGAATGGGATTTATTCGCAAGGTGATATTA 403769 30 93.3 31 ............................AA AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 403708 30 96.7 31 .............................G CATCGAAGTCATAGAACGCTTTGAGTTTCCA 403647 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 403587 30 96.7 30 .............................C CATTCTCGCTAAGTGGCATCACACGCGATG 403527 30 100.0 30 .............................. GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 403467 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 403407 30 93.3 30 ............................AG TTGATATGATTATTAATATTAAAGTTGTTT 403347 30 96.7 30 .............................G TGCCCATTCCCGCAAACACGGCGCAACGCT 403287 30 93.3 30 ............................CA TGACCCAACCACGTAAATTCATACCACACG 403227 30 93.3 30 ............................GC TCCGTAATTAATCAAGAAATAATCAAATTT 403167 30 93.3 30 ............................AG TCTTTAATGTCGGCAACATGCTGTGCAAAA 403107 30 96.7 30 ............................G. AAATATGCTGCTTTAACCCGCCAAACGAAT 403047 30 96.7 30 .............................G CATTAAGACGAATGCGGGCAATTGGTAATG 402987 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 402927 30 93.3 30 ............................AC CAGAAAAGCAGAGTAAAGCTTCACAGCCAT 402867 30 96.7 31 ............................G. AAAAAAGAACATTTCCAGCAAAAATTGACGA 402806 30 100.0 30 .............................. GCTGCCTGCAAACTTGTTTGGGGCTTTATG 402746 30 93.3 30 ............................AC TGGAATTCAGCAGTAAATAAGGGGTTAAGA 402686 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 402626 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 402566 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 402506 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 402446 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 84 30 95.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCTACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.18, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //