Array 1 69435-68736 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAFEHJ010000004.1 Lacticaseibacillus rhamnosus strain 1473 NODE_4_length_188594_cov_42.555779, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     69434	    36	 100.0	    30	....................................	CCTAAACAATGTTTCCATTCTCGCCGATGC	
     69368	    36	 100.0	    30	....................................	ACAATACCCCGCCATATCCCCCTTAATGTT	
     69302	    36	 100.0	    30	....................................	TTACAATGAAGCTCAAAAGTGACGTATTTC	
     69236	    36	 100.0	    30	....................................	AACCGTTTCGATTTCCTTGCAAAAGAGACG	
     69170	    36	 100.0	    30	....................................	AGCAGACGGTTATATTTTAAAAGTCAGTGA	
     69104	    36	  97.2	    30	....................T...............	TCGGTGTCGGTGTCGTCCTTATGCAACAAC	
     69038	    36	 100.0	    30	....................................	ACTATGGGCTACTGCGTGGGCTACTGTAGT	
     68972	    36	 100.0	    30	....................................	CATTCAACCCTGTCACCTGACGGTGCGTCG	
     68906	    36	 100.0	    30	....................................	TTACCGTTGGATTTAAATTTAATCTCATCA	
     68840	    36	 100.0	    30	....................................	TCAAGTCACTCGGCCATGTATTGACAACCC	
     68774	    36	  86.1	     0	.......................AA.A....G...G	|                             	T,CC [68739,68745]
==========	======	======	======	====================================	==============================	==================
        11	    36	  98.5	    30	GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC	                              	       

# Left flank :   GAGATGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAGAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTAAACAAGCTGTTAGATCAGGTTAAGGACACATCGTTAGAATTACTTCTCATTGAATTTTCAGATGTCGAACGTGGAAAGTTTTTTGAGAAATGCCAGTATATCTATATTGACAAAGATTTCATGGATAACCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG
# Right flank :  ACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAACGAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTACATGTACCAACAGGCGTTCAAATCCCTTTACGACAAATATCAAGATCGGGAAACCAACCCCTACTGTGAATCGTTTGAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAATCGTTGAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGTAGCCCGTATCTCGCCATTTTTAATCTTGCCGTCTTATCAAGGAAAGAGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGAAAACGACGATTAATGAGCATAT

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.87   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//