Array 1 71564-70274 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANRZ01000021.1 Neisseria meningitidis 61103 NM61103.contig.20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 71563 36 94.4 30 ........G...A....................... TTTTTGTATCCATTCCCAGCCGGAAATTAA 71497 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 71431 36 100.0 30 .................................... CTGACCACACCTATCCGCCAGTGCTTATGC 71365 36 100.0 30 .................................... AAGCCGGTTTATGGCAATTCTGCCGCGTCC 71299 36 100.0 30 .................................... ATGCCTTTTTTTGTACTGTTGTTTGAACGA 71233 36 100.0 30 .................................... AAATTCGTTTCAGATAGCAAACGCAGTAGT 71167 36 100.0 30 .................................... GCCGGATATGACGGTGGGCAACTGGTACAG 71101 36 100.0 30 .................................... ATTTCGCTTTTGTATTGATTCAAGGTGCTT 71035 36 100.0 30 .................................... AGTATTCGTCGATGATGGAAACTCGAGCAT 70969 36 100.0 30 .................................... GGGTAGCCAGTGCTAAAACCGCACCCGCTT 70903 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 70837 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 70771 36 100.0 30 .................................... TTTCTTTTTGTAATTGTTCTGCCTTTTTTA 70705 36 100.0 30 .................................... CAATAACGGCGAGTTTACGCATCAATGCGG 70639 36 100.0 30 .................................... TGTTATCCCCGGAGTACCTTTTATCCGTTG 70573 36 100.0 30 .................................... CCGGTTTGCCGGCTTTTGCGTGTTCGGTTT 70507 36 100.0 30 .................................... TTGCGCATGATGGCAACGATAATTACCATC 70441 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAC 70375 36 100.0 30 .................................... TCATACCCAAATCATCGGCATCCTGTTGGT 70309 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.7 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGGAAACGGTCGATGTGTCTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //