Array 1 5522-4090 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACDXX010000032.1 Pseudogemmobacter sp. CC-YST710 contig032, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5521 29 100.0 32 ............................. AGGATGAGATATGACAAATTCAGTGCTGCATG 5460 29 100.0 32 ............................. CCGCTAACCGCCGCCGCGCCATCCATGGCGGC 5399 29 100.0 32 ............................. GCGGGTCGAGATTGGCAAGTTGTCACCCCCGC 5338 29 100.0 32 ............................. GCCTCTCTGTTGCCCCTGCCATGGCTGCCACT 5277 29 100.0 32 ............................. ATTATGAGGCCGCCATACAGGCCCACATCGAC 5216 29 100.0 32 ............................. CCCTCATTCCGCATTTCTTCCCACCTCCTGGA 5155 29 100.0 32 ............................. GCCCCGAATGGCGATGCGGTCGAGGTCATCAA 5094 29 100.0 32 ............................. GCCCGCCAATGGCTTAGGCAGTGCGCATCAGA 5033 29 100.0 32 ............................. GCCATGCGGCATACTCCTTTCGGCCTCCTGGA 4972 29 100.0 32 ............................. ATACGGCCATTGCTTGCCTGCGGATAAACCGC 4911 29 100.0 32 ............................. GCGGGCATCGACGCGCTGGACATGAGACAGCC 4850 29 100.0 32 ............................. CATTAGGGGCATATCCACATGGGCGCAGGCCG 4789 29 100.0 32 ............................. ACCCGGCGCGACCTCATTGTCGAGGATTACAA 4728 29 100.0 32 ............................. CATAGCAGCCGCTAACGTCCGCGTACCCCTTG 4667 29 100.0 32 ............................. GGGGTGCGGTGTGAGCGCATGGGAGCCCAGCA 4606 29 100.0 32 ............................. CCTCGGTCTCGGGGGTGGCGGTGCTGCCCTCG 4545 29 100.0 32 ............................. CTCTTCGGGGGGCCGTCTCGCTTCTGTCCCAT 4484 29 100.0 32 ............................. GTACAAGTGCTTCATGACCCTTGCCGAGACGG 4423 29 100.0 32 ............................. CGTCCTCGTATTCAGGGGCGAGCGAGAATGTC 4362 29 100.0 32 ............................. TCACCAACATGACTGCGGTCGAGATCGAAGGC 4301 29 100.0 32 ............................. TTCTGACGAACGCCGGGACTTCATATTTGGCG 4240 29 100.0 32 ............................. CTCAGTGACCCGGAAGCGCGGCTCCCATTGCT 4179 29 100.0 32 ............................. GATGACTGGTGGAATATTGTTCCGGCGTTGCC 4118 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 24 29 100.0 32 CTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CGCCGTACGAGGCTTTTGTCAAAGATCATCCCGATGATTGAGACAGTTTTGGAAGCCGGGGATTTGCCACGGCCCGAACCCAACCCGGAGGCGATGCCCGTGGCGATCACGGACACTCGTTCAGGTGATGAGGGCCATCGCGGATGATGGTGGTAGTAGTTAACAACGCGCCTTCCCGTCTGCGCGGCCGCTTGGCCGCCTGGCTTTTGGAAGTGCGCGCCGGTGTTTATGTCGGCGACTATTCTGCACGGACCCGCGAAAAAATATGGACGCAGGTGACCGCTTATATTGAAGGCGGAGATGCGGTGATGATTTGGAAGGCCCCGACTGAACAGGGATTTGACTTTGAGACCACCGGCCGGAACAGACGAATTCCTTTTAAAATCGACGGATTTTCGCTTGTGAGTTTCCTGCCGACAGAGAAAGGTTAAAGCCGGAAAATATCCGGTAGGTTCTTTGACATCGCAAAAACAATGGTAGATCAATTACCTGCAGGAAGA # Right flank : CCAGGGCAATGCCACAACAGTTCATCGGCCTTCATTCCCATGATCTGCTCGGCGGTCATGAGTTTCTGGCGCTGCTCTGAGTAAGAGAAGTCCCTACCGTCACCCGGAGCCTTGCCCTCACGAACCTGCTGAGAATAAACCGTGTTCTCGCCGAGATGGCGAGCTGCCCATTCGGCAGTGTCAATATCGTTGAGGTTGAAGATCCGTTTGGTGATACAGGAAGGTCACGCCCTGCATCTTCAGACGCTTCACCACGGTTTCTATGGCCCAGTCCAGGCGACCCGGCAGGAGGGCTACGCCCCGGACGTGCTGATAGCCGTCCTTGCGCCAGCCATCGGCTTCGCATTCAGTCTTGCCACAGATGGCAATGCTAGCCGTGTAACCGCGGCCTTCCCAGCTCGGAAGGAAGGTGATCGTGATCCAGACCGGCTCGGTTGATCCCATGCGGGTCAGGTCCACCCGGGAGAGCGCCTCAGCAAAGAGGGCAGGGGGCACCCCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //