Array 1 214618-217710 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXCG01000013.1 Moraxella catarrhalis strain BBH18 BBH18_contig_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 214618 28 100.0 32 ............................ ATAGCTCACCCAATCAAATTCACCACGCCAAA 214678 28 100.0 32 ............................ CAAGGCTATCAGCGGTCGCACCGTATTGACTT 214738 28 100.0 32 ............................ ACGGTGGCTCAGGGCAATCCTGTACCGATTTT 214798 28 100.0 33 ............................ CTTTGTGTTCATCAAGAAAGGTTTTGATGGGCA 214859 28 100.0 32 ............................ CTGACCAGTCCATACGCTGATTGTTAATGCCG 214919 28 100.0 32 ............................ GCATGGACAAACCAAAAAATATGTCTGTGAAA 214979 28 100.0 32 ............................ AAATCAAGCCAGATGCTCGCTTTGTGTCTTTA 215039 28 100.0 32 ............................ CATACTTTACGGTGAGCGAGAAATTGGTGGTT 215099 28 100.0 32 ............................ GTTATGTTTAAAATCGCTGTGTTATCATCTTT 215159 28 100.0 32 ............................ ATCGTTCATGGCGAAATGCGACAAGGTGGCTC 215219 28 100.0 32 ............................ ATATCTGCCAGCCCCTCAGGGAAACCCTTGGC 215279 28 100.0 32 ............................ AATACCCATCCTGCCACCACTTGTATCCAGCC 215339 28 100.0 32 ............................ TATTTTTTTCCAACTGCTTGAGCGGTTTATCC 215399 28 100.0 33 ............................ CTTGATTTGGCGGGGTGCTGGTGGGCGTAAGCT 215460 28 100.0 32 ............................ TGATATCGTACCGCTGCCTATCAAGTCACCGT 215520 28 100.0 32 ............................ CCAGTTAGCACAACTGGGGCAATTTATATTAA 215580 28 100.0 32 ............................ GAGCAAATACGCAAATTACCGCTCCGAATATC 215640 28 100.0 32 ............................ GAGCTTTGACAAGAAAGCAAGAGCAATTAACT 215700 28 100.0 32 ............................ GCTAACAGAGCTTTCAACTGTGTTAATGCGTC 215760 28 100.0 32 ............................ CAGTTGCATGGGAAGCGTTAACCAAGACTAAA 215820 28 100.0 33 ............................ CCGCTCCCCAACCCCACCGAGTGAACAGGTATG 215881 28 100.0 32 ............................ TATTAGATAGCTGTACAATACCTGCATTATTT 215941 28 100.0 32 ............................ ATGCTGTTATCGCGCTCATCTTTGGGCAAAGA 216001 28 100.0 32 ............................ GTCAAATCTTTTTGAGCTGATTAAACTTCAAA 216061 28 100.0 32 ............................ ACTATTTATAATAAGATTTCTGCCCCCAGCGG 216121 28 100.0 32 ............................ GCTAACAGAGCTTTCAACTGTGTTAATGCGTA 216181 28 100.0 32 ............................ TTTCATGCAAAATTGTACCCCCTTTGTGCAAA 216241 28 100.0 32 ............................ TTTTGGTTGATTATCTATTTCAGAAACTCTAT 216301 28 100.0 33 ............................ CCGACCCCCTTACTTACTGTATATAAATCACCA 216362 28 100.0 32 ............................ CTGTGCTTGAGTCTCTTGGGACTTCTGATAAG 216422 28 100.0 32 ............................ TGCAAATATGCTTTTGTTTGGTACGCCAACAA 216482 28 100.0 32 ............................ AATAGCTAATCGCACGAAATACGCCAGCCAAT 216542 28 100.0 32 ............................ ATAGTGCCTGTGGGTTGATAAATCTTTGCCAA 216602 28 100.0 32 ............................ CTTGATGTCAAAATTCCCTTTGGAATCTTTAA 216662 28 100.0 32 ............................ TTTGTCTTGATAAAAATTAAATTCTTGTTTAC 216722 28 100.0 32 ............................ ATACACACACACTTTAATACCATTTTTGGCGG 216782 28 100.0 32 ............................ CGACCAAAAGGGGTCGGTACTCTTTCTTCGTT 216842 28 100.0 32 ............................ GCTGTTTTGATTACCGAAGCCAAGCAGCGGCA 216902 28 100.0 32 ............................ AGTAAATCAAAAACAATAGCCGAGAAAATACT 216962 28 100.0 32 ............................ GCACAGCTTGCAAATAAAGCAAGCACGGCAAC 217022 28 100.0 32 ............................ AGAGCTGACCGCCCATTGGGTTTTTAGCACAT 217082 28 100.0 32 ............................ TAAAGGTGTTGGCAATGTTACTTATCATAAAT 217142 28 100.0 32 ............................ GAAAACATGGGCTTTTTATCGCCGTGCGGACT 217202 28 100.0 32 ............................ TACAACACTCACAGGCTATGGTATTGGTAATG 217262 28 100.0 32 ............................ TTACACGCTACTGACCTACATTTGGGTAGGAC 217322 28 100.0 32 ............................ AGTTTCAAAATATCAACTTCCCCTAGTAGCTT 217382 28 100.0 32 ............................ CGTAGCATTCAACGCATCAATCGTATTTTTGA 217442 28 100.0 32 ............................ TTTGCCATAAATCTCACGCACGGACTGCCGTC 217502 28 100.0 32 ............................ GCTTTGGCGGTTTTATTCGGCTCACTTGGCGT 217562 28 100.0 33 ............................ AACCGCTTTAAATGCAACAGATAAGGCATCTGT 217623 28 96.4 32 .....T...................... TGGGGAAGTTAGGCATTTAAAATGGCAGGATA 217683 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 52 28 99.9 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTCAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : ATTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGACGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTTCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //