Array 1 9579-9382 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SNXK01000007.1 Nocardia ignorata strain DSM 44496 Ga0244500_107, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
      9578	    28	 100.0	    33	............................	CGGATTGTCGGTGTCGGGCATCAGTCGATCTGC	
      9517	    28	 100.0	    33	............................	CCGTTGGGTCAGGTTGCGCGCCAACCGCGTCTT	
      9456	    28	  92.9	    17	.......................C.C..	GCGCGTGCCCCGAGGGG                	TA [9435] Deletion [9412]
      9409	    28	  89.3	     0	........................T.TG	|                                	
==========	======	======	======	============================	=================================	==================
         4	    28	  95.5	    28	GTGCTCCCCGCGCGAGCGGGGATGAGCC	                                 	       

# Left flank :   GTCTCGAACACAAGAAAACCACTCTGACCCAGGTCGGAGAGGGTTTTGCCTGTCGGGCTGACAGGATTTGAACCTGTGACCACTTGACGCCGGTTCACGTCGACTCGAAGCTACCGGAATGTACCCAAAACTACTGGTAGAGCAGGACTTCGGCGCACGCCGCATTCTGGTTGTTTCCCATCGTTTCCCGCTGTTCCGGCTATTTCTGTGTGATTAATGTGTGTTGGGTCGAGTACTGCGGACGCGGCTTTGCTGCGCTTTCGAGAAGTCGTCAACTGCGCCCGTGCTCGGTCGGTGTGGTGACGATGCACCGGCAGGCTGCTCGATGGACGGCTAGGGTGCTGTGACGTTGCGGTATGACGGTGGCTGCTGAGGGCGCGTGATGAGGTGGTGTATGTGGAACCGGATACTGGTCTGCCGAGTTGGTGACTTCGGCCTCGAAGCGGTCGAAAGTGAATGAAATTTGGCTGGTTGGTCTGCAAACGCGCAGGTCAATTAGT
# Right flank :  AGCGGGGCCGATCGACGGTGCGGTCGGTCGGACCTACTCAACGCTCACCATTGGAGATGGCGCTGGGTAAGAATTTGACTCCGCGGTGTCAAATAGCGGATTCGTCGAACGCGGTCGAGTACTGGGCGTCCAGGCTGGGTTTGATGCTGCCGGCAACTCGGAGAAGGACTCGCCCACGGAGATGGTGGTACTCGGTTCCCAGGATCGGGTTGGTTCGTTGAAGGCCGGCGATGTAGTTCGCGCGCTGTTGTGCGGCGTCGGGAGTTGGCCAGACCTCGATCGTAGCGCCGCAGTCGGTGCCGAGGTCAGGGCATGCTGTCGTGGCGTCGTAGAGAACCGCTGCGTCAACGTACCCGTTCGGACGGCCGATGAGATTGTTCGGATCGTTGTCCTCGGTGATCGTCACCACGTTGGTGATTGTCGAGAGGCGGTTCCTGAGGAACTCGGCGATGGTCGACGCGTTCGGTTGAGGGTCGGGAATGGCGGCCATGCTCGAGGTA

# Questionable array : NO	 Score: 5.09
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:-0.54, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGCTCCCCGCGCGAGCGGGGATGAGCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [3,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGCTCCCCGCGCGAGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-6.30,-6.50] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [35.0-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//