Array 1 1597516-1595039 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010554.1 Rugosibacter aromaticivorans strain Ca6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1597515 36 100.0 29 .................................... TGAAATGGCACACGCAATGCTGCATGAAA 1597450 36 100.0 30 .................................... GGAGGGCGCTAATTCATATAGCATGGCATG 1597384 36 100.0 30 .................................... GAGCATGTCGAGGCGCAGAAAGTTGTCGCA 1597318 36 100.0 30 .................................... CTTGTTAATCCATACCCATTTGGTGGTTTC 1597252 36 100.0 31 .................................... AGCCATGCGGATTTTAATAATCGCCATTGCA 1597185 36 100.0 30 .................................... CGGAGAGGCCGTCTTGCGGCAGTCGGTAGC 1597119 36 100.0 30 .................................... TCATTCAGTCCATTGCTTTCAAGTATTTCA 1597053 36 100.0 30 .................................... TTGCACCAAAGCGGCAACAGCCGGAAGGTA 1596987 36 100.0 30 .................................... GAGGCCGTTAAAGCATCCGTCAAGGCTATT 1596921 36 100.0 30 .................................... CAGATTGATGCGCTGGAAGCCAGTCGGCTC 1596855 36 100.0 30 .................................... TGGTTCACGGATGCGAACTACTGGCCGACT 1596789 36 100.0 30 .................................... TGCGCCATCATGTCGGTGAGTTTTGAGTTT 1596723 36 100.0 30 .................................... TCCCTTTGTCGTCGCCTTCCTTGCCTTCGA 1596657 36 100.0 30 .................................... AATACATCGCAAGACTCGCAAACTATTGTT 1596591 36 100.0 30 .................................... ACTCACACAGGAGTAGCCATGCCGAATTCA 1596525 36 100.0 30 .................................... TCACAGGTGCAACAGGCATTGGAGGGGGTG 1596459 36 100.0 30 .................................... GACACCGGCGCGTGCCGCCACTTTTTTGAT 1596393 36 100.0 30 .................................... TGAGCCGGATTGATGTCACCGCCAGCGCGG 1596327 36 100.0 30 .................................... GGCATGCAACATCAGGGCCTCGCGCTGCTT 1596261 36 100.0 30 .................................... TATGGGCAGTAGCCCAACGCCTGCGCTACC 1596195 36 100.0 30 .................................... TCGCGCAGGGATCGGGTCGTCGTCATTCCG 1596129 36 100.0 29 .................................... TCTGATGCGCGAGATGTGATGGTTGAGGG 1596064 36 100.0 30 .................................... TACCGGCTCTGTGCCATATCGAGTGAAGTA 1595998 36 100.0 30 .................................... TACATGAAAGACCCTAGCAAGAATACTTGA 1595932 36 100.0 30 .................................... ACCTTCAGCCTATCTGTCGAGGTGCCGATC 1595866 36 100.0 30 .................................... TTTGCTCACATACTTGGCTATGTATCCAAC 1595800 36 100.0 30 .................................... TCGAGTACGATGCACTCGGGCGGCGCGCAG 1595734 36 100.0 30 .................................... GCCTTCGCGCGACGCATGGGCATCAACAAA 1595668 36 100.0 30 .................................... AGCCGCAACAAGGCGAACCGAGGCGATCTG 1595602 36 100.0 30 .................................... TTGATTCGCACGTTGGCGTTGTCAGAAAAG 1595536 36 100.0 30 .................................... TCATCATCCACATCCGATGGGTATCAATAT 1595470 36 100.0 30 .................................... TTGCGTGATACTTGTTTGAGAATAGACAAG 1595404 36 100.0 30 .................................... CCTTGATCGATGCTCTGTTCCCCCATGCTT 1595338 36 100.0 30 .................................... CGGATTCCCGAAGATTCGACCGGCAATAAA 1595272 36 100.0 30 .................................... ATCCGATTGATGCGGCCTATGGAAGGGCGG 1595206 36 100.0 30 .................................... TACACAACTCGGGGGGTGTCCGGTGAAAAG 1595140 36 100.0 30 .................................... TAGATGCAGAAGCAAGCAAATTAGCGGGAT 1595074 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 38 36 100.0 30 ACTTTAGCAGATTGGGATTTGCGCTCTGACCGGAAC # Left flank : ATCATTGGCGCAAGTTTTCATGGGTGAAAAAGACAAACTTGACCTGCCGTTGCCTGGTTTGCCCCTCAGCCTTGCGGCATCGTTACAAGACGATTAACGTGCCATGCTTTCCGGATATCGCCTTATGTGGATTACGGTGATGTTCGATTTACCCGTTGTCGAAAAAGCTGAGCGAAAAGCTGCCACGGATTTTCGTAATACATTGCTTGACATGGGCTTTGAGATGTCGCAATTTTCAGTGTATATGCGTTTTTGCAGTAGTCAGAGTCAAATAGATACTTATATCTTGCAGGTGGAAAAAAGCTTACCCACCGGCGGAAAGGTAAATATCTTGCAATTCACTGACAAGCAGTATGAGAGAATCATCACCTTCCAGGGCAAAAAGAAAAACCCAAGTAAAAAATCACCGGATCAATATGATCTGTTTTGATGAAATCAACATTTTTCCTGTCAGAAGCTGCACTTAACCCATCAAAAGATCAATGGGTTAGTGCAGTGGT # Right flank : CGAGGCCATCGCACGCCGCTGTCCTTCTTATAGCTCGGGTAGCGCGGAAAGCTCATGCACCGGTCGCCGGATTTTTGGGGAAAAAACGCACCTGCGGGAGGTCTTTGAAATGCTCGTCCTGCGTCCACAGCGTTGCGCCGTGACGCATCGCCGTGGCGTAGATCAGACTGTCCGCCATGGGGAGCGGATAGCGCATGGCTTCCAGCGCCAGGGCGCTGTCCAGGTCGATGACCTGCCCGGTCTGCATCATGCTGGCAATTTGGAGCGCGTCATTTTCCCCGCGTTCGCGCAGCACCTTTTTGCAGACTTCATAAATGGTGATGACGGGTATCATCAGATTTTCGGCATCTTCAATGGCCGGGGCGAAGAGGGATGCGCGGCCGCTGTCGGTGAAGTATTCCAGCCACCCAGAAGAGTCGACGACGTTGGCAATAGTCACAGGCGGTCATCCTCCCGCTCGATGAGAGTATCCATGCCGCGCAAAAAGCCACGCATTTCCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTTTAGCAGATTGGGATTTGCGCTCTGACCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.70,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 2 2494275-2492296 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010554.1 Rugosibacter aromaticivorans strain Ca6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2494274 37 100.0 34 ..................................... ATGCCCAAGCGCGGCGAAAGCTTCGCGCACTCTT 2494203 37 100.0 34 ..................................... CATCGTAAGACGGAAACTTGGAACGCTCCCCGAT 2494132 37 100.0 35 ..................................... GGAGCGAAATGCGAAAGTGGCCGAACTTTGGCCGC 2494060 37 100.0 34 ..................................... GCTAGTTCAAAAGGTGTTACCGGGCCGAATTACG 2493989 37 100.0 36 ..................................... GGTAGTTTGTACTTCGCAGAAATGTAGCTGGTGAAA 2493916 37 100.0 37 ..................................... ATTTCCCGCGGAGGGAATGATTCGCATGTCATAGCCG 2493842 37 100.0 35 ..................................... CCATAGGGTTTGCTTTTACTTCTGCTTTTGTTGAC 2493770 37 100.0 34 ..................................... TTGACGCCAGGCGCGTGGGAAACCTACCGGAAAG 2493699 37 100.0 34 ..................................... ATTGCTGGATTGTTAGCGGATACGCAAACGCTTC 2493628 37 100.0 36 ..................................... TTTTCAAACGCCGTCATCCCTTCTGCGCCAGCCGTC 2493555 37 100.0 34 ..................................... TTCTTCGTGTGTGCCGAGGAAAAGGTGGCTAGGG 2493484 37 100.0 35 ..................................... ATTCCAGTTCCGCGAACTCAGCCAAGGGCCAGCCT 2493412 37 100.0 38 ..................................... ACCTTTTGAGAGTCGATATTCCATAATCATCATCAAAA 2493337 37 100.0 36 ..................................... AGCTGCATATTTGCTTACATTAGAAGATGAGCCCAC 2493264 37 100.0 35 ..................................... TCATGCCACCACCTTCGTTAACGCAGCTTTTCGTT 2493192 37 100.0 36 ..................................... ATCTCGCAAACGCAGACGAATCGCCCTCTCTTTCTC 2493119 37 100.0 35 ..................................... CTGCCCATTTCGTCGACTCAATAACTTCGGCCCCA 2493047 37 100.0 35 ..................................... ATTGCTTTTACCCAATAGGAACAGGCTTTTTTAAC 2492975 37 100.0 34 ..................................... TCCATGATCTAGCCGGAAACCTTCTTCAACTCGG 2492904 37 100.0 35 ..................................... AGTGGTGGATTTAAACGCCGCGAACGATTCGCATA 2492832 37 100.0 34 ..................................... CATCCAAAAAGCAGCCGCTTGCCCCGTTTTCCGG 2492761 37 100.0 34 ..................................... TGGGCAGTGTGGCAAGAAGGCGGTAATCTCGCTA 2492690 37 100.0 35 ..................................... CGATCAAGTTTCATCACAGATCGGAAAACAGCCAG 2492618 37 100.0 34 ..................................... AATGGCTGGCACCCGCATTTACACATCTTGCTGT 2492547 37 100.0 37 ..................................... AAACGATGTCAGGGGTCATTGGCGACGCCGTGATGGG 2492473 37 100.0 33 ..................................... ACGATGGGGCCGGCGCGGTGCTTCCTGATTTGG 2492403 37 100.0 34 ..................................... ATCCCCTGTGCAACGAGCGGCGCGATCTTTTCAA 2492332 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 28 37 100.0 35 GTCGCGCCCCTCGGCAACGGGGGGCGAGGATTGAAAC # Left flank : TGCTACGCTGATGTCATGCTGGTCATCGTCTGCTACGACGTGAATACCGAAACCCGCGAAGGGCGGCGCAGGCTACGCCGCGTCGCGCGCGTGTGCGAAGGTGTTGGGCAGCGAGTGCAAAAATCGGTCTTCGAATTTCAGATCGATCTGGCAAAAATGGAAGAATTGGAGCGGCGCCTGCTGGCCGAAATCAAGCCGGAGGAGGATAATCTGCGTCTCTATCGTTTGGCCGAGTCGAGAGGCTGCGAAGTGAGAGAGCACGGGGTTTTCAAAGCCACCGATTTTGATGGGCCGCTCGTGTTGTAGAAGGTGATGGCGTGTAGCGCGAACCCTAAGCTCACATGAAAAAGCGGGGAGGTTCGCGCAACATTCAAGTAGTTGAATTCTTGGGACAACGTCAGTTGATTGGGTATCCAATGGAAGCACGGAAAATGGTTCGAGCACCGGTTCGCGAAATGCGTGCCGAAATATCCGTGATTTCCGCCTGTTGTGCGCGAACC # Right flank : TTGTGCGGGAAGCGCTTGGCCATTGCATCCAGCTCGGTGTTGACTGCCTGAACCATAAGCCGTTTAACGTCAGCATAAGTTTTCTCTCCGTGTTGCAGGATAGCGTCGACCACATCGCGTCCGCTGGCAGACAGGGCTTCATAGCGCGACTTCATTCCCGCATCCACAACCACATCGCTTTTCCACAACGGTGCATAGCCCCACTTACGTGACATGGTGGAATCTTTCAGAAAGCTCTCCACGGCGGCTTTGTCCGTGACGTTGGAGGCCCGCTCCATGATTTCATCGACCGCTTTTTCCATGCGGTTCTTGATCTGATCCTTTTCATTCATGGCGCGCTGGAACGCCGCGGCGGAAGTGAGCCCCTGCTTGGTGGCCCGCTCAACCAGATCGTGCAGGAACATGACCTTGTCGAGCGCCTTGCTCGTCAGGTCAAGCGCCGTGGCCTTGGCCCGCTGTACCATTTCGGAAATCGTTGACTCCGTAAAAGTCTTGAACTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCTCGGCAACGGGGGGCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.90,-17.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : NA //