Array 1 277017-278042 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGLAX010000005.1 Enterococcus faecalis strain C116 NODE_5_length_278083_cov_64.097174, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 277017 36 100.0 30 .................................... TTTTAAAATCTACCTGAGTCCCTGCAGTTT 277083 36 100.0 30 .................................... GAGTCCACATCGTTATATACTTGCCCGACA 277149 36 100.0 30 .................................... GTACCTCTATGGAATCTGGGCGAATCATTT 277215 36 100.0 30 .................................... TTCAACTGGTGTTTTAATTTTCCTTAGCTG 277281 36 100.0 30 .................................... CGACTCTGTGGCGATTTCCATGCGGGACTA 277347 36 100.0 30 .................................... AGGTGGGTAGGGTGGTAGGCAACCTCATTG 277413 36 100.0 30 .................................... CAAGCCCTCAACTATCTTGTAACTCGATGG 277479 36 100.0 30 .................................... AAACTGGGGTTAATTGATTGACTTTCCCCC 277545 36 100.0 30 .................................... TTGAATCCCAAAGTCCACTAAAGAATTCTT 277611 36 100.0 30 .................................... ATTTGCCAGATCCACAAGCAAAGGTTGGCT 277677 36 100.0 30 .................................... ACTATTCTAACGCGGGTTGGCAAGATATGG 277743 36 100.0 30 .................................... CCCTAACAATATTTAGATATTGTGGTTTAT 277809 36 100.0 30 .................................... CTACACCCTTCGTTAAAGTACCTGTTAACT 277875 36 100.0 30 .................................... GATCAAGAAGAGTTATCGAATGCAATTCTG 277941 36 100.0 30 .................................... TGTGGAACTGTGAATCGTTGGTCTACCCAA 278007 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 16 36 100.0 30 GTTTTTGTACTCTCAATAATTTCTTATCAGTAAAAC # Left flank : ATCCACTATTTATTTCAACAATTAAAAGAAATAGCACGGGAAACAAATCAGTTAAAGTTTTTTATTTTTAGTAATCGAAGTTTGCCTTTGGCTTATACAGAAGAAGATATTGAGAAAACGATTTTGTTATACGATCAGTACCAACAGTTGCCAGCCTTTGATATTTTTCGTCAAAGTATTGAGCGTCATTATCCCGATGAATTTGTTTGGACGAATCAGCAATTGGTTGATGCTTTTTATCGAGTCTGTCATTTTGTTGGTGATCAGTATACAAAAAATTATCTTTTACCTAGAGATATGATATTATTAAAATTGTTAAAAGAATTGTTAGATGACAATAGTGAGAGTGTCGAGACGTCGATGGGAAAGCTCACTGTGTTGGAAGAACAATATTTTCGTGAACGGTTATTGTGGAAAGAGTGAATCTGGGATTTTGACCGCGTAAAGTTATATTTTTTGTCAAAAAGCTTACTAATGAGATTTCAAATTTTAAATTTGAG # Right flank : GATCAAGAAGAGTTATCGAATGCAATTCTGGTTTTTGTACT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAATAATTTCTTATCAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 604-40 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGLAX010000012.1 Enterococcus faecalis strain C116 NODE_12_length_38405_cov_58.718926, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 603 36 100.0 29 .................................... TGCTGTTTCTTTACATATTTGTACGTACT 538 36 100.0 30 .................................... ATCTCCTTTAATACATTTTTATTAAAGTAT 472 36 100.0 30 .................................... GTTAGCCATCTCATAGTTTAATGCTTCATT 406 36 100.0 30 .................................... TATTAATGACATTTTTATATAACTAATAAG 340 36 100.0 30 .................................... CAAGCTGGTGATATTGTTGAAGTAGATGTT 274 36 100.0 30 .................................... TGCTTCCAGTAACTTCTTGCACTTTATAAC 208 36 100.0 30 .................................... CTGTTGCAGAAGATGCAGGAAAGCAAGTAC 142 36 100.0 31 .................................... ACGCTTTTTCCTAACAAGTACATCGACTGCA 75 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 9 36 100.0 30 GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Left flank : GCCAGATTGGACTTGACTCAGACCTGTTCCGCTTCCGCCACCTTGGACATTAATAAATCTTCCCGGATTTTGGCTTTGATATTCCTCACTCGCTGTCTCTACTAATGGTTGTAAAGCTGATGAGCCTACCGCTGTGATGGATTCACCACGATCAATCCATTTTGCACATCCTGTTAAAGTAAGTATACTTGCCAAACCAATAAATAATAGCAATCTTTTTTTCATCGATTCATTATTCCTCCAATTAATTTCAATCTATTCCATTTTACCATTATATGTAGGACTTGAAAATTATAAGTTATCAATTTGTTGGTACAACTGAGAAAACTCTTAAATTAAATAACAAAAAGTATCTGAAGAAGCCAATTTGGCTGTTGCTTCAGATACAAACAATTATGCTAGAAAGATGTCTATATTTAAGAATTTGGTGGGAATGACTTTATTTGAAAGATTATTGGGAGTACAAAAATAATTTATTCATGGTATCTCCTTTCAATAAA # Right flank : CCAGAATTGCATTCGATAACTCTTCTTGATCGTTTTACTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //