Array 1 1277093-1278279 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031455.1 Streptomyces olivoreticuli subsp. olivoreticuli strain ATCC 31159 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1277093 28 100.0 33 ............................ GTATATAGGCGGGTCAGAGCAGCGCTTTGAGCA 1277154 28 100.0 33 ............................ GGCATAGGCCGCTTCACTGGCGGAACCGTGGAC 1277215 28 100.0 33 ............................ GTCGTGACCCGCCTGACCCCGGGCGAAGCGCGC 1277276 28 100.0 33 ............................ GACCCAGGCGGCTGAAGAAAAGCGGCTTCAGAG 1277337 28 100.0 33 ............................ GGCATCGCAGACGATCTGATCCATATTGCCGCA 1277398 28 100.0 33 ............................ GCGGTGGCGGATCTACGGCCCCACCCGGCAGGC 1277459 28 100.0 33 ............................ GCCCTTCGCGTTGGCGGGTGAGACGGCGCGCGG 1277520 28 100.0 33 ............................ GCGGCCGAGCGCAGCGCCGCCTACGACGTTCCC 1277581 28 100.0 33 ............................ GACGCTCGTGGGCAACACCCTGCATCCCGACCC 1277642 28 100.0 33 ............................ GCGGAGCTCGTTGAGCCGCTCGGCCCCGCAGCC 1277703 28 100.0 33 ............................ GATCCGCGCTCCATGCCACCATGGCAAAAGCGC 1277764 28 100.0 33 ............................ GGGGGAGGAACAGCCCGTGAACGCCACCCAGCC 1277825 28 100.0 33 ............................ GCGTTCCTGCTCATCGGCTGTGAGGTCTCCTGT 1277886 28 100.0 33 ............................ GGGCAAAGGGGCGACGGACCTCCTGGCGAAAAT 1277947 28 100.0 33 ............................ GGTGACGGTTCCGGCGAGTGCACGTCCGTCGGG 1278008 28 100.0 33 ............................ GACGGACGCGAGCTTGACGGCCTTCTCGATGTC 1278069 28 100.0 33 ............................ GTCGTAGGCGGTCCACGCGCAGATGCGGGCGGC 1278130 28 100.0 33 ............................ GCGTGTGTCTCCGCTCCACGCGCCGAAGGACGG 1278191 28 96.4 33 .......................A.... GGTCTCCGTGCTGCTGCGCAATCCGGTGCTTCT 1278252 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 20 28 99.8 33 GTCCGCTCCGCGCAGGCGGAGGTGAGCC # Left flank : CACGCCGCGTGAGCAGCGGATACGTCCTGGACCACACCGCGGTACGCGCTCTCGCTCACGGCAACATCTACATGGCCGCCCGGGTGTTCCGTTCCGTGCAAGTGGTACAGCCCCTGTATGTACCCGCGACCGCCTTCGCCCAAGGCCTCGCCGACAGCACACTCTCCGAGGTCGGACAGCAGCTCCACGACGCACTGAGCGCACCTTGCTTCATCTTCCGCCCCTTGGAGGAGGCCTCGTGCTGGGCAGCGGCCCAGATCGCCCACGAGCGCGCAACCGACATCGCCACCGGCCACACGGCACACCTGGCCCTCGGCTCCGGCCTGCCGGTCCTGACCCACAACCCGGATACGTACAAACGCATCGATGCCCGCATCGATGTCGAGCCCATCAACTGACCGGTGCGCCAGCTGCCGCCTGAGCTGTCCACAGCCCTCCTTCAGGGCTGCCGGGATGATAACGAAGTGGCAAAGCCTTTCAAACGACGCAGGTCGCGAAGG # Right flank : CGTGGGCGATCACGGGGTTGTTTGTGACAGGTTCTGTTGGCCCCACTCCGACATTGAAGTTGGCCCCACTGAGGGTGTGACGGGGCTCGGGTGAGGGTCGTCAACCTGGCATCGACAAGTTGTTTTGGCCCCACCCCGAACGAGTGGGTTCCCTGGTCGGGGGGCGGGGTCGGAGCGGTAGCGTGAAGGACATCGGATCCGGACTGGACGACGGGCCCCGACACCCCGCCGGACCACAGGATCTCGACCCGTGTTCGATAGGGACCGCTGGATTCTCCGATCCGCGGTGGCCGACGAGCGCGGGCATTGGCGCGACCGGCGGAGAACGGTTCGGGCCCAACCGGGCCGAGGCCGGTGCCCCTGTAAGGGGCGCCGGCCTCGGTTCTTGAGGCGGGGATGGTTCAGGGCTTGGGCTTGCGGTGCTTCTCCTGGGTCTTCTTGAAGCGGAAGCTGTCGGTGCCGGTCTCGACGATGTGCGCGTTGAAGGTCACCCGGTCCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTCCGCGCAGGCGGAGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCTCCGCGCAGGCGGAGGTGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.80,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1281377-1281586 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031455.1 Streptomyces olivoreticuli subsp. olivoreticuli strain ATCC 31159 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1281377 28 96.4 33 .......................A.... GGTCTCCGTGCTGCTGCGCAATCCGGTGCTTCT 1281438 28 100.0 33 ............................ GTGGGCGATCACGGGGTTGAGCGCGCCCCAGTC 1281499 28 100.0 33 ............................ GCGGCACAGGCACTGATCCCCGTGGACTACCGC 1281560 27 89.3 0 ..............C....-....G... | ========== ====== ====== ====== ============================ ================================= ================== 4 28 96.4 33 GTCCGCTCCGCGCAGGCGGAGGTGAGCC # Left flank : TCCGTTCGACGGTGTGCTTCTGCTTCCGCGGGGCCCTCAGATCGGCCCGCAGCATCGCGTCGATCCACTCCGCGGCCGGGTCCAGGACGCGGAACTTCCGTCTCACCGCCTTGCGCTGAGGCGGGATCGCGGAGGCCATGGCCTGGCGGACAGTCCGGCGGTGGACGCCGTATTTCGCTGCCAGAGCTCGATGTGAGAGCGACGGATCGAGACGTACGTCCCGACGGATGTTTTCGAACAGCTCGACACGCGACAGACGCACCCCGGCCTCCCGACACGGCCATGACCAACGACACGGCCTCCGACATGACCGTGAACGACGGACACACCCTGACGGGATCGGGCAGACAGCTCACACCATTCACTCGGACGAGGGCACGTCGCCTCTCACCAGGACAGGTGGGGCCAATTCAAATGTCGATCAAGCTGGGGCCAGACCAACCTGTCGGAGTGGGGCCACTGAAACCTGTCACAAACACGGGGTTGAGCGCGCCCCAGTC # Right flank : CGCTGCAAGGTGCCAACTGGGCACGCCACCGCCCATTGTCAGTGGCGGATGCTACATCTGTATCTCCGCGCCGACACATGGAGGCTCCGTGAGTAATGACGCTGTCGACTTACGTTTCTGGGGCAAGCAACGGGATCTGAGTCACCCTTACCCGGTGATTTGCCACCTCCTGGATACCGCCGCCATCGCCGGTGCGCTGTGGGACCGGATGCTGAGCGGTCAAGCGCGGGAGCGGGTGGCGAAGGAGCTGGGGCTGTCTCTGGAGGGGTGTCGGCGTCTGCTAGGTCTGTGGGCAGGGTTGCACGACATCGGGAAGATCACTCCGCCGTTTCAGGCTCAACTTCCAGCTGCCTACCGGGAGATTTCCGGTGATCTCGCCTACGCGCACCAGCCAGGTGCGGAGCGGGAGCGGCTGCGTCACGACAGTGCCGGGCACTGGGCGTTGACAGGGCTGTTTGCTGAGTGGGGGTATCCGTCGTCGCGTCGGTGGACGGGTGCCG # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTCCGCGCAGGCGGAGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCTCCGCGCAGGCGGAGGTGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.80,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1291170-1291807 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031455.1 Streptomyces olivoreticuli subsp. olivoreticuli strain ATCC 31159 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1291170 28 100.0 33 ............................ GGCCCAGGCCAACGCCGCCAGCTCGACGATGGT 1291231 28 100.0 33 ............................ GTTCATCCTCCACGTTCCCGTGCAGTTCGTACG 1291292 28 100.0 33 ............................ GGTGATCGTGAACCCGGCCAGCGGCCACGTGTG 1291353 28 100.0 33 ............................ CCCGCCTCTTCCAGCATGGCCGCCATCTGGATC 1291414 28 100.0 33 ............................ GACGATCAGGGCGCTGCGGTGCGCGACGGGCAG 1291475 28 100.0 33 ............................ GCTAATTTCTACCGCTCTCCCCCTTCTAAAGCG 1291536 28 100.0 33 ............................ AGGATCGTGTTGGGTACGGCCACGCCTTCGACA 1291597 28 100.0 33 ............................ GCGGTTCGGGCGCAGTGCCGTAACTGCTCCGGC 1291658 28 100.0 33 ............................ GCTGCTGCAGCAGCTCCTCAGCCGTGGCGAACC 1291719 28 100.0 33 ............................ ATCGTCGGCCCCGCCCGCCCGCCGTGTTCCTCC 1291780 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 11 28 100.0 33 GTCCGCTCCGCGCAGGCGGAGGTGAACC # Left flank : CGTCCAACAGCTTCTGGAACCCACCGCAGACATCGACGAGGTCGACCTTGAGGAGCAGCTCGTAGACCTGTGGGACCCCGTCTCCGGAGCCCTGCCCGGCGGAGTCAACTACGGGGCGGGGGAACTGTGACAACGGACCGCGGAGGAACACCGTGCCCTCAATGATCACCCTCGCCGCGACAGCCGTACCGGACCACGTGCGCGGGGCACTCACCCGCTGGCTCCTGGAAGTCACCCCGGAGCTGTACGTCGGCACAGTCTCGGCGAAAGTACGCGATGAACTCTGGGACGCGGTCCGCGCATGCATCGACGACGGCGTGGCAGTACTCACCTACCCAGCAGCCAACGAACAAGGATTCATGCTCAGAACTGCTGGCCGACACCGCCGCACCCCTGTCGACTTCGACGGCCTCACCCTGGTCGCTTTCAGAGCTCCACCACCGCCTGACGAGAGCGATAAAGAAATGGCAAACCCCTTCTAACACCGCAGGTCGCGAAGG # Right flank : CAACAGGCGGCGTACCCGCACAGTTGGCGGTGCCGCCTGCGCAGCAGTCGGGCGGCAGCCACAGTTGATCTGGAGGTCAACGACGACGCGTTTCGCCGACCGGAGCACGGCCACCGCCTCGGCGTCGCACTCGTGCCCGATGTGGAGCAGCAGCGGGAAGGGGGCATCCCCGAGCGAGCGGGCAGTCCATGTCACGAATGGACCCTGCGCGCGCCGTCAGAAGTTCAGTGGCTGGACAAAAGTAGGAGAGCCGCCGCCCGCCGGGCCGCCGCTGATGAGGCCGACGCCGGTGGCGGTGGAGGTGGTGGTGGCAGGGGCGTAGACCGGGCCGCCGGAGTCGCCGCCGTTGCCGTTCTGGCTGCTCTCGGCGAGGCCCATGACGGCGCCTTCCGGGTAGTTGACGGTGACGTTGGTGGCGAGGATCATCCCGCATTGCATGCCACTGGTGGCTCCGGTGCCACAGACCGACTGGCCCTGCTGGGGTTGGGCGAAGCCGGTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTCCGCGCAGGCGGAGGTGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCTCCGCGCAGGCGGAGGTGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.80,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 1391926-1393115 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031455.1 Streptomyces olivoreticuli subsp. olivoreticuli strain ATCC 31159 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1391926 29 100.0 32 ............................. GGCGGAACTCTGTCGGGCACTTACAACGAATC 1391987 29 100.0 32 ............................. CAGCGGGTCATCACCCCGCTGATCAGTGATTC 1392048 29 100.0 32 ............................. TCATGGGACCCAAACCAACCCATGCCCATTCA 1392109 29 100.0 32 ............................. TCCGCCCGTCAGGACTTCCTGTCGGACCCCAT 1392170 29 100.0 32 ............................. GTTTCTCGAAGCTGTGGGAAGAGGAGGGAGAC 1392231 29 100.0 32 ............................. GGGTCGGGCCGCAGTCCCGGCAAGGAGGGAAA 1392292 29 100.0 32 ............................. ACATCGAGCAGGACCCCATTCCCGGGACCTGA 1392353 29 100.0 32 ............................. TGGATGTTGGGGTACGGGCTCTTGGCGGGGGT 1392414 29 100.0 32 ............................. GTCCCCGCTACCTGGTAGGTGTCGTTCGTTGT 1392475 29 100.0 32 ............................. TATGCCACACCGAAGAGCGGAATGCAATGGGG 1392536 29 100.0 32 ............................. AGTGCCGACTGGCGGACCAGCGCCACAGCGGA 1392597 29 100.0 32 ............................. AGGCCGTTCGAAGTGACCTGCTGAGTGATGTG 1392658 29 96.6 32 ............................G CGGGTTGCCTGTGAGGGCGCGTTCGGTGAGGC 1392719 29 100.0 34 ............................. CGGCGTAGACGCCCCCCCCCAGGTGGCCGTAGCG 1392782 29 100.0 32 ............................. ACCGCGAGCCGGACGGCCCCGTCGTCGAGGAG 1392843 29 100.0 32 ............................. GATCGTGAGGCCATCAGCTGCCGCCTTCGTTG 1392904 29 100.0 32 ............................. TACGTTGCGCAGTACGGCAGTTCCGTTGACCT 1392965 29 100.0 32 ............................. TGTCCGGCGTGGTCTCGTACACCAGGTACACG 1393026 29 100.0 32 ............................. GCGGCAAACGCCGTGGCCCGCGGGTTCGCGGT 1393087 29 75.9 0 ................T..A..G.A.GAG | ========== ====== ====== ====== ============================= ================================== ================== 20 29 98.6 32 GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : TCTTCGAAGTGGAGTTGGGCATCCCGTCCGGCCTCGGCCCCATGGAGGCCGACGAGTGCCAGGTCGACCCGGCCGCCTTCGCGGCTTTCACCGACGCCCTGCTGCATGGCACCGGAAGACGCACCATGCCGTCATACTCGCGCTCTCCGAGGGATTCGTCGCCACCGTGCTGGCCCTGGCCGGACGCGCGGGCGCCGAGGTGCGCTGGACACCACCTGAAGCCGACCCCGGCGAGGGACTCAGAGATGTACAGGCCGGCCCAGCCGTTCCTGCCGCCGTGGATGACGAGGCTTGGAGGGCGGGGCTGCGGGCGAAGTCGCGGGAACTGGACCGATTCATGGCACGCTGATCGGTCCTGAGCCTCCCCCGCAATGCGGCAACGTACAGGCACGCGACAAGCTACGCCTCACCCGGAAAGGAACTGAATGACTGGGATGTCAGAATCGGCTGTGGTGAGCAAAGACTGGTCTCCAGCAGAGTAAAGCCGCTGGTCATCTCCT # Right flank : GCCTTCGACAATTCCGTCGCAGCATTCGGCTTTCACTCACCCCCAGCATCCGCAGGGGCGCCGGGAGCAGGGCTCGTGGAACAGCGTTCGATCGCCTGCAGTCGACGAGAGCCTCAAGTTCACGTGCGCTGCCCCGGATGGAGCGCCTGCAGGAATGGTGACGGGGTCCGTGGAGTGGAAACAGGTGCCGCGAGTGGCCAGAACGCGGTAGGTATTGAGTGCGCAGGTGAGGTAGTCGTCGGGGCCCACCTTTCTCATGGCCGGGTCGCGGCTTTCCTCCGGGTGCGCTTCCCAGCCTTCCGGGGTGCGGATCAGGTCAGGGCCGATGATCATCGCTCCGTAGTCGTACTCCAGGCCCTGGGCGGTGTAGATGCAGCCGATCTGTTCATGGCCTCCGTCGCCAGTCGCCCAGTACACGCGACCGGGAACACGGGGCGCGGAGGGTGAGGTCTGGTCGGCGCGGAGGTTCCACGGCCGTTCCCATAGAGACCTCCGGTGGA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 8317626-8316377 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031455.1 Streptomyces olivoreticuli subsp. olivoreticuli strain ATCC 31159 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8317625 29 100.0 32 ............................. TCTCCTGGTAGCAGATGTTCTGATCGTCGCAC 8317564 29 100.0 32 ............................. GCGGAGTAGCCGTCCGACGAATCCAGGCACAG 8317503 29 100.0 32 ............................. GTGGCGGGCGTCGTGCTCGCCGAGGCGGTCGA 8317442 29 100.0 32 ............................. GTCACCTCACGCACCTCCGCGCCCTTGCCCGA 8317381 29 100.0 32 ............................. TCGACGATTCCGTGGTTGGCGAGCATGCGCAG 8317320 29 100.0 32 ............................. CCCTTCGCCGACACTGATCCAGCCGCAGGACC 8317259 29 100.0 32 ............................. CCCCGGACGATGGGCGGTACGACGAACACGGG 8317198 29 100.0 32 ............................. CTCCTATAGATCGTCAAGCGGTCTGTGGGAGC 8317137 29 100.0 32 ............................. TGGTTGTACCGGACTGCCGCGCTTCGCCGGGC 8317076 29 100.0 32 ............................. CCGGTGGAGAAGGTGGGGGAGCCAGTGAAGCC 8317015 29 100.0 32 ............................. TGACGGCCGGGCCTCAGATGCATCACCGGGGC 8316954 29 100.0 32 ............................. TTCATCAGCGTCGGCGTCCATCGTCTGCTGGG 8316893 29 100.0 32 ............................. TCGGCGGTGTAGGTGAGCTGGTCGGAGGCCGG 8316832 29 100.0 32 ............................. TCGTCGCCGTGATCATCATGACCGGTCATGTG 8316771 29 100.0 32 ............................. TCCTGGTACGCCGCGAAGACGGCCGCGCAGCT 8316710 29 100.0 32 ............................. GAAACCGCCACGCTCATAGACAAGGCGAAGGC 8316649 29 100.0 32 ............................. TCAGGCACGGTGACGCTCTCGACCTCCATGTC 8316588 29 100.0 32 ............................. GGCCAACGCGGCTCACTGGTCGAGGCGTACGA 8316527 29 100.0 32 ............................. CAGGTACGGCGACACCGAACACGCCTCAACCT 8316466 29 93.1 32 ..........T..A............... ACCCCGACAGCCGCGAGGCACTGCTTGTCCTT 8316405 29 96.6 0 .............A............... | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.5 32 GTCCGTCCCGCAGGCGCGGGGGTGACCCG # Left flank : GACGACCGCGGCGATCCGCGCCGGGCCCGCTGCCGGATGTCCCGAAGAAGCCGGGCGCGTGGCCAAGGGGAAGCCGGCGCTGGAGATCCTGGACGAACTCAGCCGGTGAGACCGGTGGTCGCCGACGCCGGCTACGGACAGTCGGCCGCCTCCCGCCGTGCTCTGCGCGAGCGGGGACTCGACCACGTCGTCATAGTCCGCAGTGACAAGATCGCACGCATGGGGCAGAGGCGATGCAGTTCCAACCCGCCTATGGCGGCCTGGAACTGGATCATTTCGGCGATGCGACCGTCCAACTGGGGCACAGGGCCGGACTTCTGGGCCTACCTGGGCAGATTCGGCCCGCTCGGCCACCCGTCTTGAATCACTCACTCAATGCGAAGCCAGCACCTAGACTGGCTTGCGAGATAGACACGCATGACCGAATCCTCTCGGCTCCGCCCGACCAGCCCCTTGGTAACGAAATAGCAAAGCCGCTACAACGTCGCAGTTCGCGAAGG # Right flank : CAGGGCAAACGCTTGAGGGCCGAGCCGATTACGTCCGTCCCGCACACGCGGGTACCAGACCAAGAATCCTCCAGCCTGACGGAACATGCTGGTCAGCTCGCTCCCAAATGCGTTGTCAGTGGCCTCCGTTAGCGTACGGGTAAGAGCAATACTCATACGGAAGGATCTTGGTGATCTCCTTGAACGTCGCGGACGGGGCATGGTTACCCGTCCGCCCCGCACGCGGAGCGGAGCATGCCGATGGCGTGTACGGGCCTCCGCCTCCCTGGTTACCCGGCGGGTTGGTCGGCGGTTACGCGCAGGCGTTATCGGCCGCGCATCTGATCGACCACATCGACGTCCCGTACGAGGCCACGGAGTCGGTGGTCATGAGGAATCTCGTGGCCATGACGATGAGAGTCACGGGGCTGGACCGGGCGCGGGGGCAGGAGTGGCAGCGGTTGCGGGCCCGGGTGCTGGCCGAGGGGCGTTTCGACGCGGCCAGGGTGGAGGCCTATTTC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGTCCCGCAGGCGCGGGGGTGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.80,-9.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 6 8323606-8322540 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031455.1 Streptomyces olivoreticuli subsp. olivoreticuli strain ATCC 31159 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8323605 29 100.0 32 ............................. GCCCTGCCGACGCGCTCGACCAGCGCGTAGTC 8323544 29 100.0 32 ............................. TGACGCTGCCACTCGGCCGGCCACGACGGGTT 8323483 29 100.0 32 ............................. CCGCTCACACGCCGGCCCTCCCCCTCCGCCCA 8323422 29 100.0 32 ............................. CAATCCGCATCGCCCGTTCCCATGCCTCACCG 8323361 29 100.0 32 ............................. GCCGGCGGAATCGTGGCCCCCAATCTCGACCG 8323300 29 96.6 32 ............................T AGGCGGCGAGCTGGGCGGAGTGCCCCGCGCGC 8323239 29 100.0 32 ............................. ACGTGGCCTTCCTTGCCCTTCTCGCGGATCTC 8323178 29 100.0 32 ............................. GAGGAGGCGCCGTGACCGCACAGCCTGAACAC 8323117 29 100.0 32 ............................. CGCGTCCAGATATCTACCCCAATCCGGTCTAT 8323056 29 100.0 32 ............................. CTGGCGGGATGCCGTCGCAGAGGATCCGGATG 8322995 29 100.0 32 ............................. TTCGCCGGCGTGCTGCCCCAGCAGATGCAGGC 8322934 29 100.0 32 ............................. TCATGGGGCACAGTCACCATCACGCCCGGCCC 8322873 29 100.0 32 ............................. CGGACTGCTGCGTCCGTGATGTGGTGCCGTCA 8322812 29 100.0 32 ............................. CAACGGGAAGGCCGTTGCACGCCCTGCGCAAC 8322751 29 100.0 32 ............................. ACCGGCATGGCGAAGAACGCCCAGGAGGCGTT 8322690 29 93.1 32 .............A.........G..... TCGGTTACGGGGTGGGAGGACACGCCCGGGAC 8322629 29 96.6 32 .......................C..... ATGCCTAAGGCTCCAACTGCTGGGGTCCGCGG 8322568 29 72.4 0 .C.............A.......GTGTTT | ========== ====== ====== ====== ============================= ================================ ================== 18 29 97.7 32 GTCCGTCCCGCAGGCGCGGGGGTAACCCG # Left flank : CTCCAGCGACTATTGACCCCGGTACAGGCTGAGCTACACGGCCCCCTGCACGAGTGAGCTGCACCGTACTGGAACGAAGCGGACTTCGGCCCGCTATCCGCCCTCGACCTGGGCCAGATGGCAGGCTGTTCGGGCCACTCCGAAGCCTCCGAACCCACATCGGCCTACAGCTCAGCCAACGCCGCTATCAGGAAGCGGCTTCAAGCCAGAAGCCGCCGACATCGGCGGCTCCCCATCCCTCGCGGCCGCCAAAGCCAGCTCGCCTCCGTGAGCGTGGAGCGGACTGCTTACCATCAGAGCAGGCGCTGGACACTACCCGCAGCCCCACCCGAGCAGATTCGGCCCGCTCGACCAACCTCTTGAAACACCCACTCGACACGAAGCCAGCACCTAAACTGGCCTGCGAGATAGGCACGCGTGATCGAATCTCCTCAACTCCACTGACCCAGCCCCTTGATAACGAAATAGCAAAGCCACTACAACGCCGCAGTTCGCGAAGG # Right flank : GTGACAGGTTCTGTTGGCCCCACTCCGACATTGAAGTTGGCCCCACTGAGGGTGTGACGGGGCTCGGGTGAGGGTCGTCAACCTGGCATCGACAAGTTGTTTTGGCCCCACCCCGAACGAGTGGGTTCCCTGGTCGGGGGGCGGGGTCGGAGCGGTAGCGTGAAGGACATCGGATCCGGACTGGACGACGGGCCCCGACACCCCGCCGGACCACAGGATCTCGACCCGTGTTCGATAGGGACCGCTGGATTCTCCGATCCGCGGTGGCCGACGAGCGCGGGCATTGGCGCGACCGGCGGAGAACGGTTCGGGCCCAACCGGGCCGAGGCCGGTGCCCCTGTAAGGGGCGCCGGCCTCGGTTCTTGAGGCGGGGATGGTTCAGGGCTTGGGCTTGCGGTGCTTCTCCTGGGTCTTCTTGAAGCGGAAGCTGTCGGTGCCGGTCTCGACGATGTGCGCGTTGAAGGTCACCCGGTCCACGATCGCCGAGCAGAGCCGGGGAT # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGTCCCGCAGGCGCGGGGGTAACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.80,-9.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //