Array 1 1184939-1184575 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT969517.1 Eisenbergiella massiliensis strain AT11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 1184938 31 100.0 36 ............................... ACGTTCTCCCTTATCAGAGGAATTGGAATCACTACG 1184871 31 100.0 37 ............................... GCTCTTATTGGCAGCCATCTTATAAAAGCGGTGTCCG 1184803 31 96.8 35 ..................C............ AATTACGATGCCGGGATATTACATCCAGTAAATCA 1184737 31 90.3 35 ..................CA......A.... AAATTATGGAGGAAAAGACGATGGAAGAAATCAAC 1184671 30 83.9 37 ....A....-..T..T..C............ TATATTCAGAAAGCAATTGGTACGAATTAATGTCTAG 1184604 30 80.6 0 .T...A..-..........A.A....A.... | ========== ====== ====== ====== =============================== ===================================== ================== 6 31 91.9 36 TCGAGGCTTATACAGCCTTGTGGATTGAAAT # Left flank : TGAACTGTGTGCCGCAGGAGTCCCGGCCGTCAGCTTTACTATGGCAGATAATCAGCTGACCGGAGCCAGGGATATGGAACGTTTTGCCGGAATCCCTTATGTTGGCGATGTGAGGACTGCGACTGATTTTATAGAAAAGCTGGCGGAAGCCATTATTTCTCTGAGCAGCAGCTATGATAACAGATATTTCCTGGCACATTCCATGCATAAAATGGTTGACGGAAATGGAAGCGTAAGAATTGCGGAAGGGTTGGAAAAGCTATTGTGTTCTGAGGCTTCGCATGTATAATATATGTAGATTCATTTTCGATTTCTATTGGTTATATTAGTGCGAATGTACAGTGCACATTAATTTGCCTGCAGATTCGCACCTTATTTCATATGGTCATTATCCTATTAAGTATGTTTTAAAATACGAGATTGATTAATTCTTAAATAATTTTAATTATAAGTAACAATTTATATATAAAGTGATTCTTAAAATTTGTTATATTTTGCTG # Right flank : ACCTCAAAAGGAGTAAAATAAATATCATGAAACAAGCCGCCATACCACCAGAAAAAAAATCCGTTGCCATCATCACCGCCAGAGGCGGCAGCAAGCGGATTCCCCATAAAAATATCCGTGACTTCTGCGGAAAACCGATTATCAGTTATTCTATCGAAGCCGCGCTTTCGTCAGACGTCTTTGATGAGGTCATGGTTTCCACGGATGATGAGGCAATTGCTTCCATTGCCAGGAGCTTTGGAGCCGCAGTCCCCTTCATGCGTTCTGCAGAGTCCGCAAATGATTATGCCTCCACGGATGATGTAATCGCCGAAGTCCTGAGGACCTATGAAGCCGGCGGCACCCGCTTTGACCGGTTCTGCTGCATCTATCCCACCGCCCCCTTTGTGACGGCGGAAAAACTGAAAAATGCCATGGCACTTCTTGACCAGGCCGAATCCGTCATGCCGGTAGTTGCGTTTTCCTATCCGCCACAGCGGGGCATTATTCTGGAGAACGGC # Questionable array : NO Score: 5.55 # Score Detail : 1:0, 2:0, 3:3, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGAGGCTTATACAGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.06%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : NA // Array 1 409341-412597 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT969518.1 Eisenbergiella massiliensis strain AT11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 409341 33 100.0 33 ................................. ATAATAATCTCGTCCTCAGTTCCACCAGAAATA 409407 33 100.0 34 ................................. AAACTGGTGCATGCTGACGAACCGACCGATGAAG 409474 33 100.0 34 ................................. ACAAGACAGACTCCATACTACAAGCTCGGAATTT 409541 33 100.0 38 ................................. GCTTGCTGTGCTTGTGTAACCAGTGCAACCGATTTACT 409612 33 100.0 33 ................................. GGAAAAGCTGAAATGGCTTTTAAGTTAGGAGCG 409678 33 100.0 33 ................................. GTATCATCATCTACAGTTGTCTCAAAGTCGCAC 409744 33 100.0 33 ................................. ACAACAAAATGGACGCACCATATCCCAATGAAG 409810 33 100.0 35 ................................. TTCCTGTACTCATAACTTCCATCGAAACCGATACT 409878 33 100.0 34 ................................. ACGTTAAAGTCAACTTCCCATAAATTATGTTCCA 409945 33 100.0 34 ................................. ACGCTACGCCGTATTTGGACAACTCCGTTCACGG 410012 33 100.0 33 ................................. GGTTAACAAGGTTTCCTTTACTAAAGTTAACAA 410078 33 100.0 35 ................................. GCAAGTTATTACCTAACCAGCATTATGTCGCCGCT 410146 33 100.0 33 ................................. ACCAATCGGGTACTCCAAGTTTTTGTTGGCGGT 410212 33 100.0 33 ................................. ACAAGATTATTTTAAGCAGATGGGGTTAGACTT 410278 33 100.0 34 ................................. GCGCAGGATGAGACGGTTTCTGAGTCGGTTGATA 410345 33 100.0 34 ................................. ATACGTTGACTAAGATGGCCAGTTCCGGAGGGGT 410412 33 100.0 34 ................................. ATCAAACGTAACAATTCTAATTGCCGCTATTGGA 410479 33 100.0 33 ................................. ATATAGATTACAATGTCCTGGACATTGCAATCC 410545 33 100.0 33 ................................. ATAGCATTTTCAAGATCTTCTGCTATTTTTTCA 410611 33 100.0 34 ................................. ATGACCGAAGTAGTGACGCTGAGAGCTCATGGAG 410678 33 100.0 33 ................................. ATCAGTCCATTGACTTGAAAAAGCAGAATAATT 410744 33 100.0 35 ................................. GCAAATTGTTAACCAACATCATCCTGACTATCCAT 410812 33 100.0 34 ................................. ATAATTTCTACCTCCTTATAAACCCTTGAGCCTT 410879 33 100.0 33 ................................. ATAAACAAGTTCTTTTCCTTCTCTGTATACTGC 410945 33 100.0 35 ................................. ACTTCCGTAGCCTTTACGGACTTATCTTCGACAGC 411013 33 100.0 34 ................................. GAATTTTTCCTCAACTTTTATCACCCCTTTTCGC 411080 33 100.0 34 ................................. ATGTATATCTATGGATTCAAGGCAGGCTGCCGAA 411147 33 100.0 35 ................................. AGCTAATATACAAGATGCTGTTGGGGATGTTTTCA 411215 33 100.0 35 ................................. ACAGGAGGGGGAGCGTATATTATACAGTTCATTGG 411283 33 100.0 34 ................................. GGAGACATTATTGTATATCTGACCATTGGAAATA 411350 33 100.0 33 ................................. ACATTGATAATAATCTATATAATACAAATTATT 411416 33 100.0 33 ................................. AAAAACTCCTTAACTACTATAGTTCCGTTGTCA 411482 33 100.0 34 ................................. CAGAGTATCCGTCATTGCTTACCGATGCAATTCC 411549 33 100.0 35 ................................. GTAAATCTTAACTCTCTTCATTGTGTTTACCCTGC 411617 33 100.0 34 ................................. GCGAAAAGTATGTTTTGCGAAAGCGAAGCGGTAG 411684 33 100.0 36 ................................. GATGACAGCTATATTACAGATAAGGAATCCGAATTG 411753 33 100.0 36 ................................. ATTGTCACATGATTTGGGGATAAGCGGAGGCGTATC 411822 33 100.0 36 ................................. ACATGTAAAATGACAGCTAAGCAACCTGCGAGGTCC 411891 33 100.0 36 ................................. GATGCTATGATGAGCGAAGAGAAAAGCCTGAAAGCA 411960 33 100.0 33 ................................. GAAAAAACCAAATGAACATTTAATCCGGATTGT 412026 33 100.0 36 ................................. TTAATGCCCCAAACTGTGCCGACCTCCTTGATAACC 412095 33 100.0 34 ................................. TTTCCATCGGGCCCATACGCGCCCCCCTTTCTTT 412162 33 100.0 34 ................................. GTAATAATGGTTTTCCTTGCCTATGCGGTATACT 412229 33 100.0 36 ................................. GAGAAAGCGGTCCTGGAAAACTATAGGACCGTAAAG 412298 33 100.0 34 ................................. GTAACACATTCAGTGATGAACCTTGCGGATCCAT 412365 33 100.0 33 ................................. GGTGCAGTCTATAAGTTATTCATGGCACACAGC 412431 33 97.0 35 .................A............... TTTGTTAAACCGAACCTTATGCAAATGTACAGTAG 412499 33 84.8 34 .........C.....T.....A..T...T.... TATGGCTCGCCGAGCTCCCAGGTATCCAAGTGGC 412566 32 72.7 0 CCA..-A....C.....A....A.T........ | ========== ====== ====== ====== ================================= ====================================== ================== 49 33 99.1 34 GTCTTCCTCTGTATAGAGGAAGTGGATTGAAAT # Left flank : AGTTTTGATTACTACAACCAATTCAGCAAGGAACGTAAGAACAATGCATATCAGATAAAATTAAAAGTACTTTTCTGGGAATTATCAGTAGTTGCTACCTGAATCTTAAAGAAAAGTTAAAAAACGCTTTTTAAATTTGTGATGGATTGTTTGCGCTTTTTTGGTATCCGGAAGGTCATTTTTCACAGTAAACTGCCTTCGGTGATGAATTTTGGCGTTCTTGATACATATTCAGTCTAATTTTATGTGGATGATTCATTTTGTGGATAATGTAATCAGAACAAAGAATACTAAAGGTTTGTTTGAGTATGAGATGCTGGTGCGAATGTGAAGTGAACATAAAGCCCCCGGGAGATTCGCACCATGTATTTTCGGAAAAAAGAATAATTTATTTTAGACATATGATAATTTTGAAAATCTAGTTGATAATATTATTGCTTTTATGTCAAAATTAGATATAAAATGTCTTGATGAAGGATATTCATTTGTTGATATTTGCG # Right flank : TCAAGTATATTTAGGAAGTGAGAAATTTAATTGACAACCGTCCGCTTTCACTGTATATTATTTATCAGATTAGTTCTTTTTAGAACAAATCAACATATAAAAAACTACTGGTATATGCCGCTATCCGAAGCACTGTTTTTCCTGGCTAATGGAAAAATTCTGATATGCCTGGGAAGGCTCATGATTTGTTATGAAAGTCATCGAAAGTTATTTTATTTAAAGAGAGGACAGTATCTGAGGCTCCAACCTTGAAATTCTATTATATTCAAGGCCGTTACAATAACTCAATTACTGCCTGCGTTAGGAAAAAGCCTAAGGTTTCACAGGTATACCAGATATCGCTACCCAGCCAGGACAGAAGAATGCTGTATTTGGCGGCATCCCTCCAGGCAGCCACAATACAACTATTGAAAGGGGATTTTATCTATGAAAGCAACAAAGGAAAAAGAAGCCGATCTTGGAAACGGCAGTATTGGGAAGCTTCTTTTCAGGCTGGCGCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCTCTGTATAGAGGAAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 1792240-1791604 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT969518.1 Eisenbergiella massiliensis strain AT11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 1792239 33 100.0 33 ................................. ATAGAAGTGGAAAACAGATTCATGGACGAGTTC 1792173 33 100.0 35 ................................. ATGTATATCGATCCACCATATTTGCATGGGACCAG 1792105 33 100.0 33 ................................. GATTGCAGCCACGCCGGAACTGCAATCAGCCTC 1792039 33 100.0 34 ................................. GCATGGTGTCATATATTGGGTATGAAGTGGTAAA 1791972 33 100.0 36 ................................. TGAAGGATCTGCAGGAAGTTGCAGCGAATATTATAA 1791903 33 100.0 35 ................................. GATTACAAATATGTCGTATGGGATGATTTGAAGCC 1791835 33 100.0 33 ................................. AGGCCTATACATTCCCGGTTTTCCAGGTATTTG 1791769 33 100.0 34 ................................. ACTTAACATTTTTCCTTTCCCTCCACACTCAATT 1791702 33 100.0 33 ................................. GTTATCTGCACGTCGAAACGCTCATTATAGACA 1791636 33 84.8 0 .....................A.AC...A.G.. | ========== ====== ====== ====== ================================= ==================================== ================== 10 33 98.5 34 GTCGAGGCTTGCAAGAGCCTCGTGGATTGAAAT # Left flank : CGTCAGGGCGTTGCATCCGCATTGATTTCGGAAATGCTCCGGCTTATGCCGGATGTTGATATCAGTGTTACGACATACCGCGAAGGGGATGAAAAAGGAATTGCACCAAGAGCATTATATCAGCGGTTCAATTTTGTGCCGGAGGAACTGTGTATGGAATTTGATTATCCGGTACAGCGGTTTGTGCTGCACAGGTTCCGGAAAAATTTGAACTGAGATGGCCTTGGTAAGTTTGATAATCTTTTTTCTGTTGGCCGGGGGAGCAGAAAGATTAAATAATTATTTGTGTGTATTCCTACATGTGTTAAGTGGGGTTATAAATTTGGGAAGGTGCGAATTATAAGTGCACATTATTTCGCCGGGAGATTCGCACTTGAAAATTGGCAGTATGGAGATTTATGCAAATAAAAAGTAATATAATAATGACAATTTTTTAGAAGAGTTGTATAATGAGTATGTTATTACTTGGCTTTATAATATAGATGTTGTATAGTATTGCT # Right flank : ATACAGCCTCACATACCTATAATAAAAATGGAGGAAACAGGTAATTAATGAAGGAGCGAATAAAAACTATAGTTTTCTGGATTTTGCTGGCTTTCACTGCAGCAGCGGCTATGGTAACTCCGTGGGCCTGTGCAAATAAAAAAGAAAATAATTCTGAAAAGGAAACTATGGTGGAGAGTCAGGAAGCGGCTGAAGGCACGATTGTTGGTGATGGTGCCGGGTTGAACAACGTAGGGTTTGCAAAAAGCCTGGATGGCGAAAATGTAGAAAAGGCACAGGAACAGGCGGAACGAAGCATAGTCCGGCTGGATGTGCAGGGAAACGGTGCAGAGTATTTCGGAAGCGGCGTAATCTGGGATGTTACGGAGGAAGGGATAATAATTGTGACCAGCAGACATTTGCTGGAAGAAGGGGAATTGCTCCGGGTGGTTCTTCCGGACGGAAGGGAGACTTCCGGGAAGACGGAAGGCATATGTCAGGTTAAGGATATTGGTTTTGTA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTGCAAGAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 1816273-1815513 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT969518.1 Eisenbergiella massiliensis strain AT11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1816272 32 100.0 34 ................................ ACACATTCCCATTTTCAAAACTCCTTTTCCGTGC 1816206 32 100.0 35 ................................ AATTTCTCCAGATTATCAGGCATCAGACCACTTCC 1816139 32 100.0 33 ................................ ACGACTGCAACCGAGTTAATACTTTTCGGGAAA 1816074 32 100.0 34 ................................ GAATGCTGCATTGATAAAAGGAATCATTTTTTCT 1816008 32 100.0 35 ................................ AAGTTCTTCAACATTGACGTCCTTAAACCCTTCAA 1815941 32 100.0 34 ................................ AAAAGATGCGGTATCTGTATTTCCGAAAGCTTTT 1815875 32 100.0 33 ................................ TGACAGTCGCATAATACATAATTCCAGTAATAC 1815810 32 100.0 36 ................................ GCCTTGTCCCATGCACCGTTTCTGGAAAACTCTATC 1815742 32 100.0 35 ................................ ACAGATATCACACCTGCCACTGATGCAGGATTCAC 1815675 32 100.0 34 ................................ ATCAATGATCTGAACCACAGTATCGGTAACAATC 1815609 32 100.0 33 ................................ GAGATAATCACCTTCAATGACTCCATTATAAAC 1815544 32 87.5 0 ............AC.....TA........... | ========== ====== ====== ====== ================================ ==================================== ================== 12 32 99.0 34 GTCGAGGCTTATGTGGCCTCGTGGATTGAAAT # Left flank : TAGAGGCTGACTATATTGCATGCTGTGAGGACGAGGAAAAACTTCTGATGGAGTTGTGTGATTCGAAGCGGGAAAAAGAGGGGATCGGAGAGGATGTGTTCGTGCATTTTGATACGCCGCTTATGGCAGAGCATGAAATGGAATTGTTGGAAAATGCAGGTTTTTCCCGGGTTGAGATGATTGAATGCATTGATGGGGCAGTGTTTATCAGAGCGGAAAAAGAAATTCTGTGATGGGATGAAAAATGTGTAATGAGGAATGAGAAGTGTACGGCTGATTTGGAAGAAGCAGCGAGGAGGAGAGAAAGGATGCGGCAGTAAGGAAGGGGAGGGGCGAATCGGAAGTGCACATGAATTTACCGGGGGATTCGCACCAGTTTTTTGTAAATAGTAATGGGTTTGGTAAATATATTGTAATTATATAGTGATAAATTTTTAGAGAAGTTGTATAATAGTGTCGTTGAGATAGTGGTTTGAAAATATTTGTTGTATGTTTTTGCT # Right flank : AGTTGCTTTGTGACATATTCATAGGCCACAACAGGTCAAGGATCATACCACCTCAAATAATCTTTTAACCCGCTATCCATCTTCCTCCTTTCAAGCGCCGCTTGAACCCATCCCTGCATCCCTTTCAAGCACTTCTTGCTTTCACGCCCACCCGAAAAACAGTATAATCAAAGGAAAAAGTCCAGGAGGACAAGAAATGTTTGACTTAGCCCGAGTTGGAAAACAGATTAAGAAATACAGGATTGCCGCCGATATGACGCAGATGGAGCTTGCGGAGAAAATGGGTATCAGCTTCCAGGCGGTCAGTAGTTGGGAAAGAAGTGAAACTATGCCGGATATATCCAGAATGACAGAACTTGCAGAACTTTTTCACATAACCGTTGATGAACTGCTGGATTATCAGGATAAGGCGAAGTGCGTAGAAACGCTGATGCATCCTCAGGAGCAGGAAATCAGTGTAAAGGAATTACAGGAACTGGAGGGGATTGTAAAACCATCCG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTATGTGGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 2082690-2080814 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT969518.1 Eisenbergiella massiliensis strain AT11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2082689 32 100.0 33 ................................ GATAAGTTCCGCTGTTGCTTAATTCTGGTGCCA 2082624 32 100.0 33 ................................ ATGCTGGATTCTGGGAATACGCGATTAACGATA 2082559 32 100.0 34 ................................ ATCAAGTCACCCTGTTTTAATGTCCCCAGGTTGA 2082493 32 100.0 34 ................................ GAAATAACCTTCATACGCGGATACATATGACATA 2082427 32 100.0 33 ................................ ACAGATGGCCATTGTATGGTACATGTACATTGC 2082362 32 100.0 33 ................................ ATTCCGTTCCGGCGGTAACTTAGGCGTATCTGG 2082297 32 100.0 35 ................................ GTGGTGGCAATGGTAGCCATGGACGGTTGGGAACG 2082230 32 100.0 34 ................................ ACTATACCACACATGTGTCATTTACGCAACATAT 2082164 32 100.0 34 ................................ GTCTGACCGCTGCCGTACATTTCTTGAGAAACCG 2082098 32 100.0 35 ................................ AAAAATAGAAGAAGAGACGACAGAACTATCTACTT 2082031 32 100.0 33 ................................ ACAGGTATTGCAGGATAACAGTACTTCGCAGGT 2081966 32 100.0 34 ................................ ATTTTCCATGGTTTCCTCCTTAACACTGATTCCG 2081900 32 100.0 33 ................................ ATCTAAGAGGTTCCGGATCCCCTGCGAAATTAG 2081835 32 100.0 33 ................................ GCTGTTAAACTAATGATACTATGAATTTAATTT 2081770 32 100.0 36 ................................ ATGTATTTTCCATTGACAGGTATTTTCCGGTATCCC 2081702 32 100.0 34 ................................ GGATCCGGCGACAGGGAAAGACCATACGGTAAGC 2081636 32 100.0 34 ................................ TCTACCCAAAACAAACAGACGAAAGAGAAGAAGT 2081570 32 100.0 33 ................................ GTACAATGTGCAACCGAATGGTTAGGCTGCAAA 2081505 32 100.0 36 ................................ ATCAAATGGAAGCAGTCATGGGGTTGTCCTTGGCCC 2081437 32 100.0 34 ................................ CTTCTGGAATCCATATCTGATGGAATGGCATCCA 2081371 32 100.0 33 ................................ ATGCCAGCGCCGGGCAGGGCGCTGACATTTGAC 2081306 32 100.0 35 ................................ AAGTTTGGCCTTGAAGGCCTTGAAAGTTCGACAGA 2081239 32 100.0 35 ................................ AAAATTACTGGTATACCCCATCCGCTCCATTTCAT 2081172 32 100.0 33 ................................ TTTTAATTCAATATCCTTTACCTGTTTCATCCC 2081107 32 100.0 33 ................................ TTAAGGTGTTTCAACCACTCTCTGGGATACAAT 2081042 32 100.0 35 ................................ ATAGGGTTTTTGTCCTCGTTTAATAAGTTCAGAAC 2080975 32 96.9 33 .............T.................. CCTGATGCTGTGGAGCGAGATTATATCCGTATG 2080910 32 100.0 33 ................................ CGGACGAAAAGCAGGAAAGGGAATCCGGAGGGA 2080845 32 81.2 0 ....................A.AT..C...TC | ========== ====== ====== ====== ================================ ==================================== ================== 29 32 99.2 34 GTCGAGGCTTATACAGCCTCGTGGATTGAAAT # Left flank : TATAATAATGAACATACTTTAAAATGTGTAATACATTTGGCATTTTATGCTGCTGCAGATGATTATGTACTGAAATTTGAACAAACAGCAGGTAAAGGGTATGCAGATTGTATTATGATACCTAAAAAGCCGGATCGGCCAGGGATCGTACTGGAATTAAAATATAACAGCAGTGCAGAAAAAGCGATAACTCAGATTAAAGAAAGAAACTATATAAGAGTTTTTGACAAGGGTATACACGAGGTTTATCTTGTTGGTATAAATTATGACAAAAACGCGAAACATCATCAGTGTATAATTGAAACAGTAAAGAAAAACTGAAAAATACTGGTGCGAATCATAAGTGCCCATAGATTTGCGGGGGGATTCGCACTTGTATAATGATAAAATATAGGATTATATAAATATAAAATAATATAATAATGACAACTTTCGGGGAGAGTTGTATAATAGGTATGTTATTGGGAGAATTTAAAGGAATTTTGTTGTGTATTTTTGCT # Right flank : CCTACATCGATTACCAATATATTATAATTTAACTCCCATTGCCCACCTGCAAAGACACTCAAATACATAAGGAGAAGTACAATGAACAACAACGGAGAACGAAAAGAAAAAATAATACCAGACATTATCACAAATTATCAACAGTTGGAAAGTTCGATTGTTGAGCAGTTATATATGAAACGCGCATTACATGGAACCACGATAGGAACTGAAAGAGAAGAAGTATGGAGCCAGGTGTTTGAAGCGATTTTACCCAAAAAGTTTGTGATAGAACGCTCTGTTTTTATCATTGATTCTCAGGAAAATGTTTCCCATGAGGTTGATCTCGCTATTTTTGATGAGACTTATACGCCATACATATTTCGTTACGGAAGAATTAAATTTATTCCGATAGAAGCAGTAGCAGCAATTGTAGAATGCAAAAGCCAGAATATTAAAACTGAAACAATAAAAGCCTGGTATGACAGCATAGTAAAGCTAAGAACAGCGACCGGATCCAT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTATACAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.60,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 2088181-2084808 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT969518.1 Eisenbergiella massiliensis strain AT11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2088180 32 100.0 34 ................................ ATGATTATCTAATTCCCATTGTATTCTGGCAAGT 2088114 32 100.0 35 ................................ ATCTTAAATGAGTTACTCAGTATTCTTGAAAACGT 2088047 32 100.0 35 ................................ AAAACCGGCTTCTTTAATCATATTTGCTTCATAGC 2087980 32 100.0 33 ................................ TTTACGATGATTCAGACGAATTCATTTCTGAAA 2087915 32 100.0 34 ................................ AGTGCACAGCCAGAATCGTACAGATATTGTTATT 2087849 32 100.0 34 ................................ ATAATCAAGGATTCCATTCACAGCCGCAATCTTT 2087783 32 100.0 34 ................................ GCGGAAGGAAGGGCTACCATGCCTATAACCGGGT 2087717 32 100.0 33 ................................ TTACGGAGCTTGTAAAGGCGGCCGCTCCGTATG 2087652 32 100.0 34 ................................ GACTGCGGCACTGACCGATAAACCGGACAGCACC 2087586 32 100.0 33 ................................ AACATTAATCTAATGAGGATTTAGCGGAGCAAT 2087521 32 100.0 33 ................................ ATATACCGGTCAACACATGCGGGGTTAGGTGCA 2087456 32 100.0 34 ................................ AAAAAGATATACCACACAGGGGTTTCTTCCCTTT 2087390 32 100.0 33 ................................ GAACAGTTGCAGCCAGCGGTGGAACAGCTTGAA 2087325 32 100.0 33 ................................ ATCTGAATAGTTCCCCTCAAAATTATGCATAAT 2087260 32 100.0 33 ................................ ATAGTTACATCTAAGTCCGGGGATAATGTCAAA 2087195 32 100.0 34 ................................ ACGGTACTTGAATTTTGACTTACATATGTTACGA 2087129 32 100.0 35 ................................ AATCCATGGCGCAGAATATCATCTGCAAGTTCCTC 2087062 32 100.0 33 ................................ TTTCAAGGTGTGACGAGGTAGAACTGGCAAAAG 2086997 32 100.0 34 ................................ ATATTGAGTGTATTCCCGTCAAGGGGAATGGAGA 2086931 32 100.0 34 ................................ ATGACAATGATTTGATGGATTGGTTTGAAGATTA 2086865 32 100.0 33 ................................ AATCTATCCACCGGCGGGGAAGCGCCGGGAGAA 2086800 32 100.0 35 ................................ GTAGCGCGCCGCCCTCCCCGGTATATGCATCCCCC 2086733 32 100.0 34 ................................ GTGCATTATGATAAATTACGAATACCGGGAAGGT 2086667 32 100.0 34 ................................ CCATTCCGGATGGAATTAATGAAGGGCTACAAAA 2086601 32 100.0 34 ................................ GTGATATACATGATTCCTCCTACGAAAAAGAAAC 2086535 32 100.0 34 ................................ TTCTCCTTTTTAATTTGAATTTATTTTTATTATG 2086469 32 100.0 33 ................................ GTGTAATGGATTACAGAGGAATTATTATGAATC 2086404 32 100.0 34 ................................ ACTAAAAATAGGCTTCTGCGCATGTTTATTAGGA 2086338 32 100.0 35 ................................ TATTTTATCCGGCGCACCACTTCTGCGCCGTTCAT 2086271 32 100.0 33 ................................ GCGATTATAAAAGAGAGTCTATAGTCGATTCCT 2086206 32 100.0 33 ................................ ACCCCTATTGCCAGATCCAACCGATGCGCGACC 2086141 32 100.0 34 ................................ ACATATTACCTAAACTATAGCGATAGGAGCCAGG 2086075 32 100.0 33 ................................ GTCCTACATGTGGGAGAGGAGGTTGCGGATTAA 2086010 32 100.0 33 ................................ GGGAAGCTTCTCGGCCTGCTCTGCGGTGGTCAT 2085945 32 100.0 33 ................................ ATGACTATCAGACAAGCCAGCGCGGAAGGACAG 2085880 32 100.0 35 ................................ ATCCTGTCGATTGCAATAACGGTAATCACGTTCAT 2085813 32 100.0 33 ................................ ATGACTATCAGACAAGCCAGCGCGGAAGGACAG 2085748 32 100.0 37 ................................ AAATAGCAATACTGGCGTTTTGAATCCTGGTAATAGC 2085679 32 100.0 35 ................................ ATTTTTTCGCCTATGAAAAATAATTTTCGTAAGCC 2085612 32 100.0 34 ................................ AAAGCATTATGTGTTCCCCGGGCAATAAATAAAG 2085546 32 96.9 34 ...................T............ TTCGGAAAGATGTATGTCTTTTCGTTTCTCCATT 2085480 32 100.0 34 ................................ TTTTGAGGTCGAGGAGTTCCCCGATTCTGACACC 2085414 32 100.0 34 ................................ GCCAAACTGTACCAGTTCCTGCGGTGTAACATCT 2085348 32 100.0 34 ................................ ATATCCTGGACGATTATTACGATGGCGCTTTTTA 2085282 32 100.0 33 ................................ ATATGAGAAGAAGCGGAATGAACCTGATTCAAT 2085217 32 96.9 33 ....G........................... GATGGTGTCGGTGAATGCAAGGAGCTGCCGATA 2085152 32 96.9 33 ....G........................... GCTCCATAAGAGGAAGGTCTATTACAAGCTTAT 2085087 32 96.9 34 ....G........................... ATCAAACATCATGCGTGCCCGGTACTTGTCCATC 2085021 32 100.0 34 ................................ ATAAATCATATATTTCATGGCTGGCCCGCCGTCA 2084955 32 96.9 16 ...................T............ AACCATTTCCTTTTCT Deletion [2084908] 2084907 32 78.1 33 .ATA.TT.CC...................... AGTTGAGAAGGCAGATGTAGAAAGTCCAAATAC AAA [2084894] 2084839 32 78.1 0 .............T..T.C.A.T.......TA | ========== ====== ====== ====== ================================ ===================================== ================== 52 32 98.9 33 GTCGAGGCTTATACAGCCTCGTGGATTGAAAT # Left flank : AGTAAATATGTTATTCCTGGGTTTATGTATATAGGAAAGTTATATTGTATTATGATTTAGGATTGTGCAGAACCAGGGAAGGAAATTTCTGAATTAATTAAAATCTTTAATTTTTTCATAAGTGATGAAATAACAAATTTTAAAACAAGAGTATATTACCAGAATCCGGATTATTTGGAATGCTCTTGTAGAGAAGGAATTTATTGGAATGAAAAGAATGCGTTTTATTGTTATATATAAATTTTGTTGACTAAATTTACGCGCAATATATATCAATAAAAAGAAAAAATGAAATGAGATTGATTAATTCAAATTGTCATGTTGATATTAGTGCGAATCGTAAGCTTACATTAATTTACCGGGGGATTCGCACCGAATTTTTGTAAGTAGTAATGAAATTTTAAAATATATTGTAATTGTATAGTGATAAAATTTGATAGATGTTGTATAATTGTTGTGTTAGGATAAAGTTTTGAATAGATTTTTTGTATGTTTTTGCT # Right flank : CTTTTTTCTGTAAGGATAAGGTACAATTGAAAACAAAAATATAAAAAATGTTAATGTACTAAAATAATTGTAAAAAGTAGTGTGAAAAGCTTAAAATGTAATGAGTAAATCAAATAATTTATGGTAAGTCTTTACATTAAAGTTAGTTTGATTATTGAGAGCGAAAGTCGGTGTGAACGCTTGATTTACTAAATGGAAAATAAATATTTATTTTTAATCGTTTTCACACTTGTTAGTTAAGCGAATCAAAGAAATGTCTATTGGACATACTTTGATATCTGTAGTAAACTGGGTCCACTGAAACAATGTTAATTTTCGTTAGTGTTAGAAGAGTTAACTCATAAATGGAGCGAATTTAATTATGCAGGATTATTTTTATTTTTTGAACCGAAAAAATGTAGCGAATGGTTTTCGTGAATCGCTTAATAGCCGTTTTTTTGTTGATAAATCCATGCTTATACAGACTATTAGTGAGAAGATTTTAACCAAAGAAAAGTGGG # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTATACAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.60,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [19-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 6 2093649-2090770 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT969518.1 Eisenbergiella massiliensis strain AT11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2093648 32 100.0 35 ................................ ACGTTGTACAGGATTTTTCCGAGATTTTCCTCAAA 2093581 32 100.0 35 ................................ ACCCTGTAGGAAAGCCCACATTCTGGACAGGCAAT 2093514 32 100.0 34 ................................ ATATATGTGCAATTCAGCATGGAATGAAGATACC 2093448 32 100.0 34 ................................ ATTATTGTAACTTTTGGTGCTGATTCAAGAGCCG 2093382 32 100.0 33 ................................ ATTTTATTAGCTATCATAGGCGGCAATATCTTA 2093317 32 100.0 34 ................................ ATCTCCTGATTGGTCATTATACAGATTTTGACCG 2093251 32 100.0 33 ................................ ATCAAAGGAATGGCGGGCGATGCGTCCGGTCAT 2093186 32 100.0 36 ................................ GCCTCCGCTATCTTAACGCGATGCTCATATGAGCCA 2093118 32 100.0 34 ................................ ATCATTGCATGTTTCTGCATTAAACTCTTTTATA 2093052 32 100.0 35 ................................ ATTAAAGCACTATATCTTTTTGTATCGAGTGAATT 2092985 32 100.0 34 ................................ AAGCCCGATATCCTGAATATAATAAGTGAAGATT 2092919 32 100.0 34 ................................ AGAAAGAGACGGTCATCGACGAATACACAGCACA 2092853 32 100.0 33 ................................ ACATCTGGGTGTTTTGAGTGGGATTCTTTGGAC 2092788 32 100.0 33 ................................ TTCACTGAGAAGAGAAACGCCATGGCTGCCGCG 2092723 32 100.0 35 ................................ ATCAGAAGCAGATATTATGGGATATTCGGCGGCTC 2092656 32 100.0 37 ................................ GACAGCAGATAAAACATGGACGCTGAAAGCAACAGAT 2092587 32 100.0 35 ................................ ATAACAGGGGAGAACTTGTAAGGGGGAAAGTCACG 2092520 32 100.0 33 ................................ ATAAGCGGTATTGAAACTGAGCATCAGGTTAAT 2092455 32 100.0 33 ................................ ATCAACGTTATAATAGATAAAAAGGAGGGGAAC 2092390 32 100.0 34 ................................ ATTATCTGTTATACTCTGTGCATTGACCATTATC 2092324 32 100.0 34 ................................ ATATAGGTTATAATTTCATTCTGCCGTGCCCTGG 2092258 32 100.0 34 ................................ TCCTTTACAAAATCCTCAATTAACCTACTAATAA 2092192 32 100.0 35 ................................ TGTGACTACTGCCGGCTGTGAATAGAAACCGTCTG 2092125 32 100.0 35 ................................ TGCGATTTCTTCTGAATCATCCCAGTTGGGAACAA 2092058 32 100.0 34 ................................ CTATAAATACAAGGTGGGTGATACCGCACAGACT 2091992 32 100.0 34 ................................ TTGATGGGCTTGAGCGGCGTAAGAAGAAAAGTAT 2091926 32 100.0 34 ................................ TTCAACTCCGTTTTTTTACGTTTAAACTGTCTAA 2091860 32 100.0 36 ................................ AGGTCGTCCTGTGCTTTCTGCAGATCTGCTTTCACC 2091792 32 100.0 33 ................................ ACACAAGCAAAAACAAGGGAAAACATAAAAACG 2091727 32 100.0 33 ................................ TATGCTCCTGCCGATACTGACACCTATGATTAT 2091662 32 100.0 35 ................................ AGTTTATCGACCGTGCAAATGAATTCAACCTTGCG 2091595 32 100.0 34 ................................ CGATAATTGATAAACTTAATAACCTCTTCTTCTG 2091529 32 100.0 33 ................................ CTCTTAACAGGTAATACTCCCAGCCAAACATAT 2091464 32 100.0 35 ................................ TTTGGAGTCTTGGAGCTTATCGGTAATATCGTTAC 2091397 32 100.0 35 ................................ TTATTTTGGGCATGAAAAATGACCGTGTGCGAGAC 2091330 32 100.0 36 ................................ GATAAATGTAGGGTCATTGATAGATATTGCTGCGGT 2091262 32 100.0 34 ................................ ATGGTATTTGAATGTACTATCGGATGGTTTGGTA 2091196 32 100.0 33 ................................ CTCAAAAAGCAAAAGTCTTTTTATATTTATATT 2091131 32 100.0 33 ................................ ATTTCTGTTCAACGTGCCATTTCGCGCGCCAGT 2091066 32 100.0 34 ................................ ACCTTAAGGTCAATGCATTCCTTTATGGCGTTCC 2091000 32 100.0 36 ................................ CGCCACGGCAGCTCCGCCTCTTTGGCCGCACTCCGC 2090932 32 96.9 34 ....................A........... AACTACACCACACCCATAGCCCCAAGCGAAGCCA 2090866 32 96.9 33 ........................C....... CCTCTACCCGACTCTTCGTCTCCCATAAATTCA 2090801 32 78.1 0 ........T.GC.T........T.....T..G | ========== ====== ====== ====== ================================ ===================================== ================== 44 32 99.4 34 GTCGAGGTCTTTGCGACCTCGTGGATTGAAAT # Left flank : CTTTAAAAAAGCTGATTGAAAAGGAAGAATATACATTGCAGGAGTGGGCGGCAATGGAGGGGCTGGAGGCTCTTAATTATGAACCGCTTCATTCTGTTTTTCACAGAGAAGGGGATAGAATTTTGCTTGATAAAGAACGTTTGCTTTCGATTAGGCCGGAGGATATGTATGTGTGGTTTTATGAGATAGTTGATGCGGGCAGGAAGGGCGTTGCGGCGGAATAGAAGAGGGAAGAGTAATTTAAGCTCAGGCTGGGGAGGACAGACAAGGGAAGTATTTAGAGATGAAGAAAAGGGGACTTTTTTAGGACGGGAGTATGATTTTAGTTGGTGCGAACCGTAAGTTCCCATGGATTTGCCGGGGGATTCGCACCTGTTTTTGGGGAGAAATGGATGAAATATAGTGTGGAGATGATTATTTGGTGGAAATAATCGTGGGGTGGTTGTATAATAGATATAGATTTTGCAGGGGAAGGGATTTGGTTTTTGGAGGGATTTGCT # Right flank : TTTGGAGAAAGATGGTCAGTGTTCATTCCATATCAAGAATTGAATTCCCAATTCAGGTAAGAATAATTTCATCAGGAAAATCGTAGCCGGCAAATAAGAAGGCTTTAACACCTCTTACATGAAATCAGATAACAATAATAACCAAAAGAACTGGAGAAATCATTATGTGGACATGCCCCAAATGTGGACGAACATTTAAAAATCAGAATCAGGATCATTTTTGTGGAAAGGCACCGGAAACAATTGATGCTTACATTTTAGAACAACCGGAAGATATACAAAAATATTTGTACCAAATGCATGGAATACTTCAGGCAGCATTACCGGATGCACAAGAGCGTATTTCATGGAGCATGCCTACTTACTGGAATCAGCATAATATTGTTCATTTTGCAGGATTTAAGAAACATATTGGTTTTTATCCCGGGCCACAGGCGATCGAGATGTTTGAAGAACGTCTGAAAGAATATAAAACCAGTAAAGGTGCGATCCAGTTTCCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGTCTTTGCGACCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : NA // Array 7 2879452-2874258 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT969518.1 Eisenbergiella massiliensis strain AT11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 2879451 31 100.0 33 ............................... ACCTGTCATGGGATTGTAAATACGATGCTTGTA 2879387 31 100.0 34 ............................... GACATACTGTGTTAAAAAGTCCGGTATAGGCACC 2879322 31 100.0 35 ............................... ACAAAGCCCAGTGTAGCTGAGGAAGAAGTCATAAG 2879256 31 100.0 33 ............................... ACGAAATCATGCAGAAAGATTTTGACTTGCTAA 2879192 31 100.0 33 ............................... GCTTGAGTCAACGCAGTCTGAACTTTAGTTTCT 2879128 31 100.0 33 ............................... ATTTCTTCATATGCATCTGCCTGATTGGTTGCA 2879064 31 100.0 33 ............................... ACAAAGCCCAGTGTAGCTGAGGAAGAAGTCATA 2879000 31 100.0 35 ............................... GTAGTAGCTGATGATGTTGCTGTAGCAGAAGAAAC 2878934 31 100.0 33 ............................... ATTATTTTTTGTAGTAGCTCTTAAAATCGCATA 2878870 31 100.0 35 ............................... AGCGATTAGCCGTTTTAAGTGGAATAATTTGCCTG 2878804 31 100.0 33 ............................... AGACCAGAGAATAGCCGCTCTGGAAAATGCATA 2878740 31 100.0 37 ............................... AGAAAGTATCGGTTTCGATGGAAGTTATGAGTACAGG 2878672 31 100.0 33 ............................... ATGAGTGACCGTTTCTGTCAAGTCCCGTTTACG 2878608 31 100.0 34 ............................... ACTCCGGAGATACGAACATACTAATCGCAGTAGG 2878543 31 100.0 33 ............................... GCTTGAGTCAACGCAGTCTGAACTTTAGTTTCT 2878479 31 100.0 35 ............................... ATAATAACCTCGTCCTCAGTTCCACCAGAAATAAC 2878413 31 100.0 34 ............................... ATCTTGAGGTAGTTTATGGAGAGTTTACCAGTAC 2878348 31 100.0 34 ............................... TGTGTCGTTTTGAGATCCAGCATTATGGCAAGGA 2878283 31 100.0 35 ............................... GGCTAATGGCTGTTGTTATATTGATAGCTGTCTTT 2878217 31 100.0 34 ............................... ATTTTGGTAATCGTCCACATAAAAATATCCGTAT 2878152 31 100.0 34 ............................... TTTTCAATAAAGTTCCGGCCAGAATTGAAACATT 2878087 31 100.0 34 ............................... ACATAATTCCCAGTCATTAAGTGTGCGTATATTA 2878022 31 100.0 33 ............................... ATAATCAAAATCAAACAAAATAATAGAAGTCAT 2877958 31 100.0 37 ............................... ATCGAACTTAAGTGGAAACAAGTACAATTCTGCGAAG 2877890 31 100.0 35 ............................... GTATTCGCATAGGTGCGGTCAAGGGTGTCTTTGTC 2877824 31 100.0 33 ............................... GGACTTGAATGAAACCGAGGAGCAGAGCAGATG 2877760 31 100.0 34 ............................... GAAAACGCATCAGGATATACAGAAGAATACTATA 2877695 31 100.0 35 ............................... GTTCCATTCTGGCTTGTCTGGCGTTCCTCTTCCTG 2877629 31 100.0 35 ............................... ACATCCTCTGGACTATACTGACATTTCTCCGGATT 2877563 31 100.0 35 ............................... ATTAATATATCCATTACCTGTATATGCCTATAATG 2877497 31 100.0 33 ............................... TATGTTTCTAAAAGGGGGCCTTATGGATGCTAT 2877433 31 100.0 35 ............................... AATCTGCCCATCCGGCGGGATGCGCCGGAAGAAGG 2877367 31 100.0 33 ............................... ATATTCTCCTACCAAAAACAGATCCTCAATCCA 2877303 31 100.0 35 ............................... AAATTTAATAGCGGCGGAAGAAGGTATTTTGCAAC 2877237 31 100.0 35 ............................... AAGACGGGCAGCTGGGGCCGGCCACACTTTTGAGG 2877171 31 100.0 35 ............................... GCGTCTGACATCCGGATACATTCGCCGCAAACTGT 2877105 31 100.0 35 ............................... AGTACATAAGGCCCCGGCAGCCAAAAGCCGGAGAA 2877039 31 100.0 33 ............................... GCCGTGCCTATAACGTTGTCGCCGTCAAATGAC 2876975 31 100.0 34 ............................... GTGGCAGAAAAGGCTGAAATGGATGCGCTATATA 2876910 31 100.0 36 ............................... AATTCTCCCTAGTGCCCGTATCAATGCTATAAGTAC 2876843 31 100.0 35 ............................... GGAAAACAGCCACGGAAAAATGGCTGAGAGAAAAT 2876777 31 100.0 33 ............................... GTGGAAAAAGAGAAAATCGTAAAAACAATTGAA 2876713 31 100.0 35 ............................... ATATGGAGAAGCAGGCGGAACAGATGCATGGGCTG 2876647 31 100.0 33 ............................... AAGAAATTCTTCTGCAGCGTCCGCCCAAGTAAC 2876583 31 100.0 35 ............................... CCATTGCCAGGTAATCAATATCCGCGGTGTTTTTC 2876517 31 100.0 34 ............................... GACTACAGGAATTAAGCAACCGTACATAAAAGCC 2876452 31 100.0 33 ............................... GCCAATGGCGGAGACTATTGACGGGCTGTTCCT 2876388 31 100.0 34 ............................... ATGTTCATCACAGCGTGTGACCCTGTCGGAATTG 2876323 31 100.0 34 ............................... AAACAGGACAGTGGGGTGATTCGATGGCAGACAT 2876258 31 100.0 35 ............................... AATAAATTGTGCAATCATAAAAATAAGCCCTGTAG 2876192 31 100.0 35 ............................... TTTCACCGACCGGACGCATATTAGTTCCCACGTTG 2876126 31 100.0 33 ............................... GCAACCGCATTCTGGACAGTCCATCGCATCATA 2876062 31 100.0 33 ............................... AGGTCATCCGAATCTTCCGTCTGAAATTGTAAT 2875998 31 100.0 35 ............................... AGCTGTAGCTGCAATTCTTCCAGGCTTTCCGTTTT 2875932 31 100.0 37 ............................... TTTAATATCATAAGCTACCTCCATCAGCCTGCGGAAG 2875864 31 100.0 35 ............................... AATTCCCGCCGCCGATAAAACTGCCCAGAGTAACG 2875798 31 100.0 35 ............................... TTCTTATTTCCGACATATATGTCAAAGCAGTCTTT 2875732 31 100.0 34 ............................... ACGCGGGCGCTGCCGAAGAACCTGCTGGAAATCA 2875667 31 100.0 34 ............................... ACCCAGCAGCATAAAACCTTCATTCCGCTCTCTT 2875602 31 100.0 36 ............................... TTTGTAGAAACTAATCTGTATTTCCGGTAATCCCAT 2875535 31 100.0 35 ............................... AGAAGGGAACAATACAGACTGCGACACAGGTGATC 2875469 31 100.0 33 ............................... GTTCCTTGGTAGATATAATAGTATGCGGTATCT 2875405 31 100.0 35 ............................... AGGTATCAGATTCTTCCGGTCTGTAGCGAATTAAG 2875339 31 100.0 36 ............................... GTGTAGATTAGATGATAGTTACCTTGATCGTACCGG 2875272 31 100.0 34 ............................... AATTGCTGGGCTTAGCCCGTACAATGCGTTTCAG 2875207 31 96.8 34 ...........A................... ATGAATTTTTTGTCGTTAAGCAATAAAATCTCCA 2875142 31 100.0 36 ............................... ATTAATTGTCCAAGATGTGGAAAATCAATTTCCAAC 2875075 31 100.0 33 ............................... GAGTATGAGCTTAATCACAAAAAAATAAATAAC 2875011 31 100.0 33 ............................... GCTGTCCTGCGGTCTGTCCGGCATTCTGGTAAA 2874947 31 100.0 34 ............................... AACGCAATGGTGGCCGGAATGAAAAAAGGGTTTG 2874882 31 100.0 34 ............................... ACGAGGTTTGCGGCCGGATAGACAGGAAGGCAAA 2874817 31 100.0 35 ............................... ATTTCAGGACCCTTAAAAGATCCAATATGCCAGTC 2874751 31 100.0 35 ............................... ACGATGCAGACGGAAACGCCAAGCAAGTACCTATT 2874685 31 96.8 35 ..A............................ ATAGGCGCATATGAAGGAGAAAGGTGGCATTACCA 2874619 31 100.0 37 ............................... TGCTGATACATCTGCTCCAACTCATTGCTGTCCCCTC 2874551 31 100.0 35 ............................... ACGGCGTTTCTCTTTTTGGGTATCCTGGTACACCT 2874485 31 100.0 38 ............................... TTTTCTTCCTGGTTGAAAATATGTCCTGGCTATTTCAG 2874416 31 100.0 33 ............................... ATTGCTTTCCATTTGTAAGCTATATCCGGCAAT 2874352 31 100.0 33 ............................... TCTACTGTCCAAGCAACACTAAGTTGTGGAAGT 2874288 31 83.9 0 ....................CA...A...TA | ========== ====== ====== ====== =============================== ====================================== ================== 80 31 99.7 34 GTCTCGGTCTTGCGACCGAGTGGATTGAAAT # Left flank : CGGCCAGGCTGAAAATGCTGATGGGAGACAGGCTGCAGGCAGTGGAAACTAATTATTGAGATATGGTGGGGAGAGCAGAGCTGCCGCAGAGGTGGTTTTACTGCGGGTATTTGTGGAATGGGGATGGCTGCGGAGATAAATATATTTGTGATTAGTGAAATTATAAACCGTTTAAAATGATGTATTTTTATAATTCAGTGTGTATAAATGGTGAAAAATTCTGCTAGTGTGTGGATAGCTGGGAATTTTTGCAGGTAAGATTGGGGGAAATGGGTAGTAAGGATCTGAAACTTAAGCGGCTAAGGTGCTTTATAGGGAAAATGAGAGTTAGTGCGAATATGAAGTGCACATGAAATCCCCGGGGGATTCGCACCTGGGAAAGACTATGTTTTGTTTGAATATGGATTTAAAATTGAATAAAAGTAAGCTGGGTTAGTTTTTTATGTGTGGAATGTATAGAGAAATGGTGATAGAATGATTAGTAGTTGTTTAGTTTTGCT # Right flank : AGTATTAATATAATGTTGGATTTCCCCTGTTTTACTCGTTCTAATAAAGATACGCACATAGCAGTCCTCACAATTTATCCCTGCTTGTGTTATACTCCAACACACTTAACTGTTTATTTCTATAAAAAGATACAACATATACTAATTCTATTACGTTTGTAAAACAACTAAATAATAAATAAATCAATTAACAGGAACCCCAAAAATAAAAGCATCAGAAATTAAAAAAATTGTAGAAAACAGATTCCAGGAACTTGGAGCAAGCAAATTCTTCTCTCTCCATCAGATTATTGCTGGGAATTCCAAGGTGAATTTTACAAGATGACGGCCTTATCTGATTTTTGGATAATAGAGTGGACCAACAATCCTTTTTACGCACTGAATCAATGCTTTGAAGATGTAGATCCCATGCAATACGATTTATTAGAGCAACAAATAATTGAATATATTAATAAACTGCTACAGCATTAATCAAAAAACCGGACAATTCAAGTTTAGTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCGGTCTTGCGACCGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : NA //