Array 1 987061-987486 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058261.1 Capnocytophaga sp. oral taxon 902 strain W10638 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 987061 46 95.7 30 T....A........................................ ATGCCGGTCGCCAAACAGCCGATAACATTA 987137 46 97.8 30 ................................T............. TGTTGAGTATTTTATAAGAAGTCAAATTAC 987213 46 100.0 30 .............................................. ACACTTGAAAGTGAACGCCTTGCCGTACGA 987289 46 100.0 30 .............................................. GTTATTGCGCAAGTAGCGCGGCTTCACTAA 987365 46 100.0 30 .............................................. AGGGCTTCGAGCTTGTAGAAGTCGTATTCT 987441 46 97.8 0 .............................................A | ========== ====== ====== ====== ============================================== ============================== ================== 6 46 98.5 30 GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Left flank : AGATGGAAAGACCTGGACTGCTAACGCAAGTAGGTAATTCTGAAAAAGAAGTACTAAAAAAACCCCGAAAATATATATTTTCGGGGTTTTTTCATTTTTAATATGTGCTCTTCCTTCCTTATTACTTCTTTTTAAATATCAAATTTATCAAGAATAAAATAACAATAGCTCCAATAGCTCCTGTCAAGATAGCACCAATCCATCCTCCTCCAAGTGAGACGTGAAACACATCTCCTAAAAGCCAATACCCCACGATACTTCCAAGAATACCAATAATGATATTGCCTATAAGACCTAATCCACTACCTTTATAGATAGTTCCTCCTAACCATCCAGCGATGGCTCCAATAATAAGTGTTGCGATAATACCCATAATTTTTAATATTAAATTAGGGTACAAAGGTAAGAATTATCATCTAAAAAAACAAATAAAAATCATAAAAGGGAGAGGATTCGCTCGATTTACTTGGCGTTATTGTTCAGATTATTTACTTATACAT # Right flank : ATAGAATTTGTTAAAAACAATACAAAGTCTACAATTAAAAGTTAAAACAATCTTAAACTTTGTTAACTTACTTGACAGAGAAGAGAATATCTTATAACTTTGTCGCAAAATTCTAAAATATTTAATCATGAGAACACTTTTTTCAATTAATTAATCATTTTTATTATGAAAAAGTCAGTACAAATCTTTTTAGAACTTATCTCAGCTATTGCACTTTACTTGTTTATAAATTCAATAGCCTATGGAGATCATTTGGTAACCCTACCCCTATACTTAACAGGGATAGTGATTATGAGTTATCTCTTTGTAAGAGAGAGACCCCAAGAATGCCTACAAAGTGCCTTACGCATTGTTCTTCCGTTTACGGGGTTAATGCTTATTGCAGGGAGTCTGCCTGATGCACATTTCAGTTTAGCTCTGATTTATATTGTGAGCACAGGGGTAGCTTTTTTATTAGGGATGCTCATTGCCACCGTGAGCAAGACGTACCAGAAGATAGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 988220-994649 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058261.1 Capnocytophaga sp. oral taxon 902 strain W10638 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 988220 46 100.0 30 .............................................. ATTGCGTATGGCGTGGTTATAGGTTCCTAC 988296 46 97.8 30 ................................T............. GATGATTAATAAAAAAACGAGAGGCAAAGA 988372 46 97.8 30 ................................T............. CATACCCACGATGTACCTTATACACTTGTC 988448 46 97.8 30 ................................T............. TATCCTCATAGGGGCTAACGAGGGCTTGGC 988524 46 95.7 30 ......................C.........T............. AGATAAAGAATGTTTATCCGGAGTTTGAAG 988600 46 95.7 30 ......................C.........T............. AGATAAAGAATGTTTATCCGGAGTTTGAAG 988676 46 97.8 30 ................................T............. ACGCTTTCGTAAAATCAAACAAAAAGTATT 988752 46 100.0 30 .............................................. ACTTCAAATTTTTCATTGCCACGCCCTACC 988828 46 100.0 30 .............................................. CAGGTAGCCCATTAGGAGTTTCTTTTGTTC 988904 46 100.0 30 .............................................. AACGCAAATATTCTTTTACATTGCGCCCTA 988980 46 100.0 30 .............................................. CAAGTAATAACATTAAGCACATTAATAGTA 989056 46 100.0 30 .............................................. GAAGTGGAAATGATAAAGATTAGTTAAGAG 989132 46 100.0 31 .............................................. TAATGAACACTACACAAGCTAAGAATTTAAT 989209 46 100.0 30 .............................................. CTACATACATCAACTTCCAAGACCAGCCGC 989285 46 100.0 30 .............................................. AACGCAAATATTCTTTTACATTGCGCCCTA 989361 46 100.0 30 .............................................. GTGTTTTTTAAACTAATAAATATGCAACTA 989437 46 100.0 30 .............................................. TAAATGGTCACAGAGAGATGGGTATACGAA 989513 46 100.0 30 .............................................. TAAATGGTCACAGAGAGATGGGTATACGAA 989589 46 100.0 30 .............................................. GGCATTAAAGTACTTTTGAGAAAGGCAAAA 989665 46 100.0 30 .............................................. TTTGCCTCTTCAGCATTAGGCGCTTTCACT 989741 46 100.0 30 .............................................. CAATACATTAGGGGCTTCACTTTGTAAAAT 989817 46 100.0 30 .............................................. TACAAAACTTTTTGAACTGTGAAAAGAGCT 989893 46 100.0 30 .............................................. TTCCTTGTTCTTCTGATAATAGCAAGGGAG 989969 46 100.0 30 .............................................. TTGAACGGAGGTATAATGAATATTTATATG 990045 46 100.0 30 .............................................. TATATAAACGGACAAAAGGCAGATGTAGAA 990121 46 100.0 30 .............................................. TTCATATCGAAGTATATATCCTCAATATTG 990197 46 100.0 30 .............................................. GAGGTGATTTTTCAATCGGGAAAGAGGGGA 990273 46 100.0 30 .............................................. ATCGAGTTGCAAGGTTTGTTCGCGCCTCTG 990349 46 100.0 30 .............................................. AAGTAAAAGGAAATCGCCAAACTGACAACC 990425 46 100.0 30 .............................................. TATGAATCCTTTTTTATTAAATCCATTAGA 990501 46 100.0 30 .............................................. TAGCGGTTTCTCTTAGTGTAGTAGGGTGCA 990577 46 100.0 30 .............................................. GAGGGCTTGAAAAATAGCCCACCCCGCCCC 990653 46 100.0 30 .............................................. AAAGGGGAAATTATTCCTTTGCGACTTCTT 990729 46 100.0 30 .............................................. TCGAGGGGAAAACTGTTATAGGACTACCTT 990805 46 100.0 30 .............................................. TTTGTATATTTAATTGTTAATTATTGTTCT 990881 46 100.0 30 .............................................. GTGGAAGGCGGGGCTATTAAGGAGATTAAG 990957 46 100.0 30 .............................................. TGGGAACGGGTGAATATAGTAGAGGGTACA 991033 46 100.0 30 .............................................. AAAAAACGCAATCCCTTATTCAGGAAATCC 991109 46 100.0 30 .............................................. ATCCATAGCATCTCTTTCTCTTATGTTGTA 991185 46 100.0 30 .............................................. CAGACGCCCTTATTACTGTGCAACTTTCTT 991261 46 100.0 30 .............................................. TCATCACTGTCCTTCCTTCTCCCTAATCTC 991337 46 100.0 30 .............................................. GTGGAAGTAACCATTAACAAAACAAGAATT 991413 46 100.0 30 .............................................. AAAACTCCGTTTTTCTGTATTGTAGCGACT 991489 46 100.0 30 .............................................. TTTTTAAATCTATTTATGAGGAACAAATTC 991565 46 100.0 30 .............................................. GAACAACACCGCAAGGCTAATGAAGCATAC 991641 46 100.0 30 .............................................. TGATAGGTGTATGGCAAGGCTGGGAGTTGA 991717 46 100.0 30 .............................................. ACATAGGCGCAGAGCTTATGAATAGGGGCT 991793 46 100.0 30 .............................................. CCCGACAGATTCATTTTCAGCTGAAAACTG 991869 46 100.0 30 .............................................. AAGGAGGCGTTTATAAATACAATATACAAT 991945 46 100.0 30 .............................................. CCCGACAGATTCATTTTCAGCTGAAGACTG 992021 46 100.0 30 .............................................. AAGAGGCTACTAATGAACTTTCACAAATAA 992097 46 100.0 30 .............................................. AAAACTCCGTTTTTCTGTATTGTAGCGACT 992173 46 100.0 30 .............................................. TGGTAGAATTATCAAACGATGCCAAAACTA 992249 46 100.0 30 .............................................. ACCAAAAAGTTATAGATATTATAATAACCA 992325 46 100.0 30 .............................................. AATGGAAATCTTTAAGTGAAGAGGACTTGT 992401 46 100.0 30 .............................................. CCCGACAGATTCATTTTCAGCTGAAGACTG 992477 46 100.0 30 .............................................. TTTCAAATATTTTCAAAGCGAAATTTTTCA 992553 46 100.0 29 .............................................. TTATGAAACATCTTATGGGAAAGAGTATT 992628 46 100.0 30 .............................................. GGTAACAAAATTGTAGTAAAGCCCTTAGGT 992704 46 100.0 30 .............................................. CAGTTCTTTACGATGCCTATTCATAAAGGC 992780 46 100.0 30 .............................................. ATAAGGTTTCTATGAGTCCAATGGCTAACC 992856 46 100.0 30 .............................................. GAGTCGGGACTATTTTTATAATGATAAAGG 992932 46 100.0 30 .............................................. AATGGAATCTTGTAATGTCTAAGAACAACG 993008 46 100.0 30 .............................................. ATACAATGAATATTTCATATGGACAAACTT 993084 46 100.0 30 .............................................. ATTTGTTTTTCAATTACTTGTTGGAACTCT 993160 46 100.0 30 .............................................. TGGTTAGACACGTATATAGCCTCTTCTAAT 993236 46 100.0 30 .............................................. AGTAGCCGTCAAGCAGCAACTTACAGCAGA 993312 46 100.0 30 .............................................. ATTTGAGAGTAACAGTATCTTCAAGCGATA 993388 46 100.0 30 .............................................. CTAAGATTGCAAATACCGATGTCAAATACG 993464 46 100.0 30 .............................................. CATCGTTTGCCTCTTGATACTATTCACCTC 993540 46 100.0 30 .............................................. CTTCGTGTATTCGATTCCTCTTAACAGCGT 993616 46 100.0 30 .............................................. TAATTCAAACAAAAACCCTCTCTTGTTAGG 993692 46 100.0 30 .............................................. CGACCTTCACCTTCTGTTACTTCTAATCCT 993768 46 100.0 30 .............................................. ATACAATGAATATTTCATATGGACAAACTT 993844 46 100.0 30 .............................................. TCTTTTGGTAGTCTCTTATATAGGCTACAG 993920 46 100.0 30 .............................................. GTACCCTAAAATTTTGTAGGACTCGATGCT 993996 46 100.0 30 .............................................. CAACGATAAGTGTCGAGCAAGTGAGGACTT 994072 46 100.0 30 .............................................. TAGACACATTGAAAGGAGAATTAAAAGCTC 994148 46 100.0 30 .............................................. TGATTGATATTTCTCATCGCTAATAAAAGA 994224 46 100.0 30 .............................................. ACCCGCACCCCCTCCCCTCCCTCTCTTCCT 994300 46 100.0 30 .............................................. AAGACCAAAGTACACAGAAAGTCACTATAT 994376 46 100.0 30 .............................................. ATACAATGAATATTTCATATGGACAAACTT 994452 46 100.0 30 .............................................. AATCTCCTAAGGATGAAGGCGATAATGCTG 994528 46 100.0 30 .............................................. ATTCCTGTGACATTGACCCTGAGGTATCTA 994604 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 85 46 99.8 30 GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Left flank : ATAGCCTATGGAGATCATTTGGTAACCCTACCCCTATACTTAACAGGGATAGTGATTATGAGTTATCTCTTTGTAAGAGAGAGACCCCAAGAATGCCTACAAAGTGCCTTACGCATTGTTCTTCCGTTTACGGGGTTAATGCTTATTGCAGGGAGTCTGCCTGATGCACATTTCAGTTTAGCTCTGATTTATATTGTGAGCACAGGGGTAGCTTTTTTATTAGGGATGCTCATTGCCACCGTGAGCAAGACGTACCAGAAGATAGGCTTATCGGCATTGACTTTTCTGCTGGTAGTTGCCGTACGGTTGTCGTTTTCAGCGGAGTTTCAATATTTGATAGGCGTACATTGGTATACCTTAGGAAGTTAATCATCTAATAGAATATAGAAAGAGGTTGCTCAGAAGTCTGGGCAACCTTTTTTATGCTTTGTTACTTATAAAATATTTTTTTTGTATCTTTGCGCTTTATTGTTGAACTATTTGATAAATTAAACATTTAT # Right flank : CCTCAATCTTTTAAGAGTTTAAATATCAATCCGTTTTGCTTAAAAACAGTACTGAAAAACCTCCTCTTTTGCCTTTGTTTATAAGACAAAAGAGGAGGTTTTCACTTTCCTATTCTTCTTAAAAAAGCTCTAATTGCACATAAGTTTCGGGAGCTGCTGTTTCTCTCTGACAGTAAAAGAACTCCATATCGCCAAACTGCTTATCGGTTAGACACATAATAGCTATATTGCCATACTGAGGTAAGTTTTGTTTTACACGATTGATATGCACTTGGGCATTCTCTCTACTAGGGCAATGCCTTACATACATCGAAAACTGAAAGAGCGTAAAACCGTCCTTTATGAGTTTATCACGAAAGTTCTGTGCTTCTTTACGCATCTTTTTCGTTTCTGTTGGCAAATCGTATAATACTAATACCCACATAATTCTATAAGCATTATATCGTTCGGCTATGATCATAATTCAGGATAAGCTATCAGTCGCTTTTCACCCGTATAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //