Array 1 1386900-1386269 **** Predicted by CRISPRDetect 2.4 *** >NC_005090.1 Wolinella succinogenes DSM 1740, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1386899 36 100.0 30 .................................... TCTTTGTCGTCTGCTCTGAGCATACTGATG 1386833 36 100.0 30 .................................... CATCAGCTTCTATTTCCTTGCCCCTGAAAT 1386767 36 100.0 31 .................................... TATACTTCCTCCCTCAGGCATGATTGCTTGG 1386700 36 100.0 30 .................................... GTGTTAGCGTACTTCTTGTACCATTCTTTT 1386634 36 100.0 30 .................................... TATTTCGACTCAGTTGCAGGCTATGTAGCT 1386568 36 100.0 30 .................................... TTGTGAGGGTATATGTACCATCCTCAAGCT 1386502 36 100.0 30 .................................... TGTTATGGTGCTAGCCGTGTCGATGTATTC 1386436 36 100.0 30 .................................... CCTTGTTGCAATGAAAACAAGATCAACCTT 1386370 36 100.0 30 .................................... GCTCAATTAGATTGGTAACTTCTTTGGCGA 1386304 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 10 36 100.0 30 ATTATAGCGAGGAATGGCTGAGTAGGCGGCTATAAC # Left flank : GATATGAGACGCTTTTGTCGGCGACACAGATTATTGCACGGTCTTTGGTGAGTGCAGGAGAACAGAAGGAGAGCAGGCGGCTGATTTTGCCATGGATGGGTGAAGATGATGTACAAGGTGAAGTTTATGAGGCTGATGGTGATGTTTGACCTGCCGACGGGGACAAAAAAGGAGCGCAAAGCCTACACACTCTTTCGAAAGTTTCTAATCAAGGAGGGCTTTGAGATGATGCAGTTTTCGGTCTATGTGAGGATATGCCGTGGGGCAGATATGGCGCTGGCTTATGAGGATCGCATCCGCCGAAACATCCCACCAAAAGGCCATGTGCGTAGCCTTGTGTTGACAAATAGTCAATATGAACGGATGCATATCCTCCTTGGAGGGCCAAAATCCCAAGAAAAAATCGGGGCAAAACAGCTTGTATTGTTCTGAATTTGAGCAGTTTTTTGTTGAGAGAAAGAGTCAAAAAGCCCTTATTATAGGGCTTTTTGAGGAGAACT # Right flank : GGGTTTATCGTCAAATTTTATCGAATGCGATCAATCTCCTCTTCCAAAGAGGCGATCTCTTTGGCGAGGCGCTCCAGCGTGGCAAATCGCTTTGAGGAATCATGCTCAAAACTTGCGGGTAGGGCGAGCTCTAGGAGATTCTCAGGAGTGATGATGCTTGCTGCGCTTGATTCGTAGAGTCCAGAGACGAGCTTTTGCCCCTCCTTGGAGAAGAGATAGAGGTAGAGTGCGATCGCTTTCTCTTTTTGAGGGAGGCGAATCACGATGATTCCCGCGTTGGCGATGGCGAGCTTGTCGCGGTAGCCCTCACCCAAGAGGGTCACTTTGGGCGAGCTTCCCCGAAGAGGCAGGAGGATATCATAGGGTTTGAGTGCATAACGGAGGATTTTTTCTCTATCGCCGCTGCTTCGCAAGGTACCCCGATGGTCGGTGAAGCAGTAGGGGGCGAAGTCTTGGATTCCGATATCAAGGTATTCAAGTGGCACATCCTTGCTGCCGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATAGCGAGGAATGGCTGAGTAGGCGGCTATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 1533496-1531926 **** Predicted by CRISPRDetect 2.4 *** >NC_005090.1 Wolinella succinogenes DSM 1740, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1533495 37 100.0 34 ..................................... TCGAATTGAGCACCCGAAATTTCACTCGGTCAAA 1533424 37 100.0 35 ..................................... AAGAAGGAAACAACCCTGTTGGGAGCAGTTCCCAA 1533352 37 100.0 36 ..................................... GGGGAAAGATGGCAAAATCAAGCATCCATATTGAGG 1533279 37 100.0 36 ..................................... AAACTGATATTTGTTTTGACTACAAAGAGATAAAAA 1533206 37 100.0 35 ..................................... CCTGCGGTAGTGGTTCGATACAATGTTTCAAGCGG 1533134 37 100.0 36 ..................................... GCTCATCAGCGGGTAGATCTCTAAAATGCCCTTTTG 1533061 37 100.0 38 ..................................... CCTCACATTGTAGTTCGATAGATTCGCTCTTGCGGAGT 1532986 37 100.0 35 ..................................... TACAGCCCGTGCCTCGTAGGCTCTATGAGTATCAG 1532914 37 100.0 35 ..................................... GGTGCTAGCGCAGACTGAAAAGCTTCGGTGAGCTC 1532842 37 100.0 35 ..................................... AAACTCTTCTGCGTCGATGCTCAGATTGATGTTGT 1532770 37 100.0 36 ..................................... CTACCACAACAAAAACAGTTAAGGGGCAAGAAAGAA 1532697 37 100.0 36 ..................................... GAAACTAATATGAGTATGAGGAACGCCACTCTTATG 1532624 37 100.0 35 ..................................... CGTGGGCGGGGTGAAGAAGGAAAACAATAAATCTA 1532552 37 100.0 37 ..................................... TATCAAGACTTGGGTTTAATGCAGATATTTACACAGA 1532478 37 100.0 34 ..................................... AATACAGGGTGGCACTCATGCTACTCTGCGAAAC 1532407 37 100.0 39 ..................................... TTGAAGAGTCGCTTATATACTAAAAAAGTTTGGGTTGAT 1532331 37 100.0 38 ..................................... TGAAAGTAGAACCCGCCTCATTTGTAGAATTTGAAGAG 1532256 37 100.0 37 ..................................... TCTTGCGTGCTCATGAAATCGTCACCGTGATTGTCGA 1532182 37 100.0 36 ..................................... TTTCAGGCGCGGCGAGTATTCCGTTTTCTAGGTTTA 1532109 37 100.0 36 ..................................... GAAGCAACTATTACAGGGCTTAATTGAGCTTACCGA 1532036 37 100.0 37 ..................................... ATAGCGTATTGATAGATGTGGTTTGCCCTGTATGCGG 1531962 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 22 37 100.0 36 GTTTCACAGGCTAAGCGGATTTGCTATAAAGTGTTGC # Left flank : ATTTCTGAAGTTGTGTGGGTCGGTCAAGTAGACTTCACCAAGATCGTTCACCCAAGTCACCTCCCACCAATCCCTGCCTGTGGTGAAGGCTCCTGTGTTGTAATCAACCTCTTGAGCATTGGAGCTTTTAGCGCCATTTGGGATAGAGGTCCAGTCGAGCTGCTTGGTGTAGGAGGCGATGTCACTATATTTGTGGATGATTTTGACACTGAGAAGCTTGTGTCCGCTTTGATTGACGATTTCTACGGAAGCTTTTTGATGCGTTGCCATGGAATTTCTCCTTTTTGTAGAGAGGCTTTTACCTCCATTGGTCGTAACACTATCTGAAGAACTTGGTGGGAATTCATCATATCTAAAAAATATAATTTTTGAAATATTTTAACCGCTCGCCTAAGAATCGACCGCTGGTTGAGATTCAAAGAATGCTTTGTTAAAGCTGGATGGGATTATTATAGAGTGTTGCGGAATCGCTTTTTGACAGTCTGTCGGGAGATTTCAAA # Right flank : CCCCCTCTGAAGATGTCCATTTTTTGGGTATTTGCAGAGGATGAGAATCGTAAAATTTTCTAAAATTGATACCTTGTGCCAAAACAAGGTTTTTTTTAGAAAAATTTGTTAGAATGTTCCCGCAACACTTTATAGCAAATCCGTTCGATGCCTTGAAATCATCAAAAAGATATAATAGACCCGCCCACTGTATTGTACATGGCGGGACTTTTTAAAACCTGTCATTGCAGTAGTTCAAGAACTCACACTGCGTGCATTTACTTCCGTCGGCACTGGAGTGAGGTAGATTGCCTAACTCTATCATTTCTATTATCTTCTTTACGAAATTATTTATCTCCGCCTTGTCTCCATCTGATATTTTTATTGGTATGGTTTTGCTATTTTTTTCAAATAGCACAAACCCCATCTCAAGCTTTTTTCTATAGATTGCCTCCGCAAGAACACCATAAGCTACAATTTGTGCCTTTTGTGCCTTTGTTATCTTCTCGCCGTGTAACTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCACAGGCTAAGCGGATTTGCTATAAAGTGTTGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //