Array 1 83853-80701 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYEA01000007.1 Acinetobacter baumannii strain SGH0411 SGH0411.fasta_7_length_180962_cov_24.738546, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 83852 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 83792 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 83732 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 83672 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 83612 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 83552 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 83492 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 83432 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 83372 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 83312 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 83252 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 83192 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 83132 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 83072 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 83012 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 82952 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 82892 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 82832 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 82772 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 82712 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 82652 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 82592 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 82532 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 82472 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 82412 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 82352 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 82292 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 82232 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 82172 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 82112 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 82052 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 81992 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 81932 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 81872 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 81812 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 81752 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 81691 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 81631 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 81571 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 81511 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 81451 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 81391 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 81331 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 81271 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 81210 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 81150 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 81090 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 81030 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 80970 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 80910 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 80850 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 80790 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 80730 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //