Array 1 41970-43413 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMJ01000011.1 Corynebacterium sp. 52A NODE_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 41970 36 100.0 28 .................................... CGCCTCCGACGGTGGCGTGATGTTCAGC 42034 36 100.0 28 .................................... CTATGGGGTGTGACCGTGAAGGAGTTAC 42098 36 100.0 28 .................................... GGCTAGTCTCACTGTCTCTGCTTGTTCT 42162 36 100.0 28 .................................... ATTGGGCTTTGTTGCCTCCCGCACCCGG 42226 36 100.0 28 .................................... CGCCAACATCCAACCCCTGCAAGCCCGC 42290 36 100.0 28 .................................... GGGATCGACATAGGGCCGCGATGGACCG 42354 36 100.0 28 .................................... ACGATTGGCCGGTCCTCTACCAGTACGG 42418 36 100.0 28 .................................... TTTCGAGGTAGTGACGTGGCCCGGGCAC 42482 36 100.0 27 .................................... CTCGTAGAGAATACCGCCATGCACTCA 42545 36 100.0 28 .................................... ACCAGACACCACTCGAGCAGCACCTCCG 42609 36 100.0 29 .................................... TACTACTTCCGAGGCCGTACAAGCGCTCA 42674 36 100.0 28 .................................... TCGCGGCGGTGCACAGCCCAGCGCACCC 42738 36 100.0 28 .................................... ATAGCCAACGTCTCACGTGGCGAGACAA 42802 36 100.0 28 .................................... CTACATCTAGTAGGGCGTCGAGCGTGGG 42866 36 100.0 28 .................................... ACTGTAGCGGGGCTCACGCACCAAGCAC 42930 36 100.0 28 .................................... GTCATCGGGCTGGGCGAATGCCGATCCA 42994 36 100.0 28 .................................... ATCCCAGCCGTAGAACTTCCACTCATGG 43058 36 100.0 28 .................................... TTAGACGGGATACGGTGCTTCGCGCGGG 43122 36 100.0 28 .................................... GGTCGAGGACGTGCACGCTGGGGCGGCG 43186 36 100.0 28 .................................... TGGGTGTGGGAGTGTCCACCGGCGCCGC 43250 36 100.0 28 .................................... AGCGGCGTCAGAGGTGTATTCCGGAGAG 43314 36 100.0 28 .................................... CACTGCAGCGTGGGATACGGCCGAGGGG 43378 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 23 36 100.0 28 GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Left flank : CATTCAACAGCAATGGCCAGAGTGTATCGACGGTCTTTCAAGACTTTGCACAGCATTTTGGTTTGTACGTCGAAGGAACAGTGGATCGGCTACAAGTCCCGCGTTGGGAAGGGCAGCTCAGTGCCAGCGAAGGACAGTGAACCGGTGTGGTGCGTCGTGATGTTTGACCTTCCGGTGAAGACCAAAAACCAGCGTAGAGAAGCTAATCGCTTCCGCAACCGGTTGTTCGACCTTGGGTTTTGCCGCGCCCAATTCAGCGTCTACGTTCAGTATTTCCCACTGGCGGCGCGTCTCAGCACGATAGTCAAACAGGTGAAAGGCGAACTTCCCGCAGGCGGAGAAGTGCGTATTTTGTCCGTGACGGACCAGCAGTGGGCAAAGGCGATCCGTTTTTCGAACCACAAGGAACAAGCGGTCGAAGAAATCCCCTCTCAACTAACAATTTTTTAAAAGCGCATGCCGAAAAAGACCCAGTTCAGGCCCTGTTTCTGGGCCTCACT # Right flank : CGAAAATGGGCATGGTGGCGGTCTCGGTTAAAGCCTATGGCGCTGCATCACGCTTAACGGCAGTACCGTTTTCCACGTCCTGTGCTGCGATGATCCTACAACCACAAGCCTGTGGCTTTCTGCAGGATCACCGCATCGCGACCTACCGCGTCGCCTCCTCCAACAGGTACAGCACGTGCTCATAGCTCCGCCCAGTGATTTGCTCCATGCCCAGCTCGCAGGTGCGGTTGGAGGACACATAGGCGTCCACGCGCCCATTGGCTTCGGCCTCGGCCAGCCCGGCGCGCTCGTCGCGGGTGGCGGCGTCGAGAAGCTCGGGGTGGAGCATGCCGCGGTCGCCGGCGGTGCCGCAGCAGCCGGCGCCGCGGGGCACGAAGGCCTCCTCGGCGGCGAAACTGGCGACGCGCACGAGGGTGTCGCTGAGTTCCATGTGGGCCAGCGAGCAGTTCGGGTGCACGGCCACCCGCCCAAGGCGGCGGGTGGGTTCAAGGTGCTCGATC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA // Array 1 60018-61935 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMJ01000002.1 Corynebacterium sp. 52A NODE_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 60018 28 100.0 33 ............................ CTGTCGATGAACTGGTGGATTACGTAGTTTCCA 60079 28 100.0 33 ............................ TTGTCCCGTTGTCTTGAAACGTCACGCCGCTGC 60140 28 100.0 33 ............................ TCCGGGCAATTTCGGATTCACCGTAGCCCCCGT 60201 28 100.0 33 ............................ TGCCTCATCGAGGTATACGGTATCGCCAGATAG 60262 28 100.0 33 ............................ CTCACGCTCTTCATCTTCAAGAGGGCGCTTCAT 60323 28 100.0 33 ............................ GATGCTGCCCCTCCCACACACACGCGGGAGGGA 60384 28 100.0 33 ............................ GGCTAGAGGGCGCGCCATCCGGCCCGTAGTGTG 60445 28 100.0 33 ............................ GCGATCGAGGCCGTGGGGACCGGCTCGTACTGG 60506 28 100.0 33 ............................ CATTCATGCGATAGGCGTAGAGGGCGATGCCTT 60567 28 100.0 33 ............................ GTGGGATAGAGGCGCGATCGGTCCGGACGATAT 60628 28 100.0 33 ............................ CCGTGAGCGGCTGGGCGTGAAGCCCGATGCGGA 60689 28 100.0 33 ............................ GCTTACGCTTGAGATAGATGGGCCTCCAAGGAA 60750 28 100.0 33 ............................ TAGCTAGATCGTCGATAGGAATACCTGCGGTGT 60811 28 100.0 33 ............................ GAGCAAGCCCAAGAGATTCAAGCGCGTGTTTTT 60872 28 100.0 33 ............................ CTGCCCGATAGCGACGGCCGTAGATCAGTGGGG 60933 28 100.0 33 ............................ TGTGGAGCACCGGCTAGGGGGCGGGGATGATGC 60994 28 100.0 33 ............................ TCCCGAGCCATCTTGAGGGTGCAAGATGGCCGG 61055 28 100.0 33 ............................ CTGGGCATGCAATGTGTGCTATTTTCCCAGCTA 61116 28 100.0 33 ............................ CTCGACTATGAGGAATACGAATACGGCTTCCTG 61177 28 100.0 33 ............................ TTTCGACATGGACGCGTTCCGCCGCCGTGTCGA 61238 28 100.0 33 ............................ CAGCCTTAGCCATCTGCGCCGCACCATCCGCGC 61299 28 100.0 33 ............................ GCCCGGATTGCCGGGAATACCGGTCTCTTCGCC 61360 28 100.0 33 ............................ TCAGGTGTACGACCAGTTTTCCGGACAGCTCAG 61421 28 100.0 33 ............................ GGAAGTGGTGAACGATGGCGCAGGTATATCGCG 61482 28 100.0 32 ............................ CCATCGCCAGCATGAGCTACGAGTACGCGGTA 61542 28 92.9 33 CG.......................... CTACTCGCCACAAGCCTCGCCGAAAAAGGACAC 61603 28 100.0 33 ............................ TGTGGATACCCTCTGGGGCGCCGTCCACGTCGA 61664 28 100.0 33 ............................ GTCTGACCTGAACAAAGATGACTTTCAGAAGAA 61725 28 100.0 33 ............................ CGTTGCTCGCAGCGGATGCAAACCCTCTATTGG 61786 28 100.0 33 ............................ TTGTGCGGCGACGGCCTGCGATTCGACCGCATA 61847 28 100.0 33 ............................ GAACTATCGAAAAAGGTCCAGCAGGCCGAAGAT 61908 28 92.9 0 ..........................TG | ========== ====== ====== ====== ============================ ================================= ================== 32 28 99.6 33 GTTTTTCCCGCACGCGCGGGAGTGGACC # Left flank : TTTTAGATGGCGGTAAGACAGAGCTATCTGGAGGGTGGCTTGCCGCCAATGGCATCGTATTCAAACGTATCCAGGACGCCCCGCCTGTCAGCGTTGAGATGATGCTTCACGCTAGTAAAGGATGGCAGACCTCCCCAGAGCTTGGAGCATCTGACCATATTCTCGACCGGCTCTCGGATACAGCGCCCGACACGGTAAGAGTAGAAGAATACTTACCTATTGCCGTGGGCATAGCCGTGTCAGGGCGTCCCTTGGCCCAACACGGAGTGGCGCATCTCAAAGGCCGAAAGAGGTTTCTTCCGCGCCCGACATATCCAGTAAGTTTATGGACTCTAGAGGTTCTATCGAGGAGACACCGTGGTTCTGGTCTGTTGGCGGAGGAGGTGACGCGCGGGAAATTTAAGACTGTTGCTCCACCGATCGTAGTTTAGTTCGTTCAAGGCGAATAGAAGTTGAATCTATACGCCGTGTTTGCTCGCTAAACCTGCTGTTCGCAGAGT # Right flank : GCAAGCTCCTGTGTTTACCTAGCAATCCAGTCGAGTTTGCCGAGGTCACCAAAAAATGTGACCCATTGTGGAGCGTGAGGGGCATCGCAGCGCTATGTGTCCATCTGTCACGATTGTGATCAGCTGTCACCTCGTTGAAAGCATGCATGAAGCATCGTTTCCTGAAGCGGTTGTGCCTTGGCAGCGGTGCTGATTTGTCCGCTGTAGCTTGTGCGCCTGTGACAGGAATCGGTTGCTGGGCACTGAAGACTCTTTCTTACTGTGGTCGGGATGCATATGGGCGCCATCAATTACCGACCTAGATCTGAATACCACTTATCTAGCGATGTCCCGATCCAGTTGAGTAGTTTTTCCAGAGCGTCTTAGGTGGAAACTTGACCGCTCCTGCGTTAACGAGTCCGTGGTCGTAGTGATACTTCGTTTGCGCTTCAGCCTTGAGTGCGGCGGGTGCCGTTTTCAGAAGTACTCGAATGGGCGGTAGAAGACATAGATGCGGCTCT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCACGCGCGGGAGTGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-11.00,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //