Array 1 1171-2196 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJGUO010000031.1 Limosilactobacillus reuteri strain 6A scaffold31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1171 36 100.0 30 .................................... TCGAGATACGATCACAGGCTTCAGCAAACT 1237 36 100.0 30 .................................... TAGTAATCATGTCGTCAGCAAGTGATTTAC 1303 36 100.0 30 .................................... AAGCGATGATCGGCCAGTTATCGACTACCG 1369 36 100.0 30 .................................... TAGATAAGTATTCCACATATCCACAGAGTA 1435 36 100.0 30 .................................... TTCATTTGTAACCTCGCTTAATACACCTGC 1501 36 100.0 30 .................................... TATCAACCCTTTTAAGAAATGAGATGGTGT 1567 36 100.0 30 .................................... ATAATAGTTGTACTTGTTCGATATCGTAAT 1633 36 100.0 30 .................................... TTCTTGCTTTTCCGTTCAGCTTGCTCATCT 1699 36 100.0 30 .................................... TTCGTTTTGCGCGTCTTTTGGCTGTGCAGT 1765 36 100.0 30 .................................... AAGTTATTAGCTATATAATACAATAGTTAC 1831 36 100.0 30 .................................... TCAATTTCATAGCCGTTATGGATTAACATA 1897 36 100.0 30 .................................... TACGTTGATGGTGGTACGGTTGTTGAGCTT 1963 36 100.0 30 .................................... TAAAAAATCGCGGTTGTAAAGGTGTTGTTG 2029 36 100.0 30 .................................... TCTTTTTCACTATGCGTTTTGGCGTAGTGT 2095 36 100.0 30 .................................... AAAGCAATCAATGAAAACAGAATACAATAT 2161 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== ============================== ================== 16 36 99.5 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGCTATGATGGTGATATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGTCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAGATACTATGGAAATGCGAATTTTTATTATATTGACAGGGATTTCGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : TAAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAATTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAAATAATGGCAACAATTAAAGAAATTGCGAAAAAGTCAGGGTACTCACCAGCAACGGTTTCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAACAAGATCATGACGGTGGCTACCGAGCTTGGCTATTGGAACAGCCACAAGAAAAACTCTCAGCAGCAACCAATTCGTCCTAATCTTGCTTTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTACGTTTTTGCGAAATGCAATTATTAAAGAAGTCGATGAGGTGGGAGCACAGGTTGAGATCTTTAGTAATATCAAAGATTTAATTGCGACGGCTGATTCGTTCCAAGGATTTATTG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //