Array 1 93092-91471 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAWA01000002.1 Streptococcus gordonii strain Channon contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 93091 36 100.0 30 .................................... GAATTACCAGATCTGGTATGTCCTATCAAA 93025 36 100.0 31 .................................... CATCAAGACTTCACTTACAACGGCGAAAGCG 92958 36 100.0 30 .................................... AGCGACCCTGTAACTTCCGTAGCGGTTTAA 92892 36 100.0 30 .................................... CCATTCCTTAGAAGAGAAATAGAGCTTTCT 92826 36 100.0 30 .................................... ATACTATCGCTGTAGTGGTTGGTCATTCTA 92760 36 100.0 30 .................................... ACAATTATCTTACCTCAAATCTTTTATTGA 92694 36 100.0 30 .................................... TTGTTGATATAAATAAAATCGGAGTCTTTC 92628 36 100.0 30 .................................... TTTGTTTAGTAGGCGTAGCTTGTTCTAAAC 92562 36 100.0 30 .................................... TAAAGTGGCTATGGAGTGCTTATGAATCTA 92496 36 100.0 30 .................................... CAGAGAAGGTCAAGTCTATTAAGGGTGTAT 92430 36 100.0 30 .................................... CACTCACCAACTTTAATTTCAATGGTCTTT 92364 36 100.0 30 .................................... TTTCGCAAAATCCTACGCATTCATGACCAG 92298 36 100.0 30 .................................... TCCCAGAAAATAAAAAAGGCCGAATCAAAG 92232 36 100.0 30 .................................... TTTTGATATACTATACATAAGCCCCCAAGG 92166 36 100.0 30 .................................... CTAAAAGACTTGAAGTAGACCACATCAAGC 92100 36 100.0 30 .................................... TTTCTTCTTGTTAAAAATTATGATGCATGT 92034 36 100.0 30 .................................... TACATACAAGTTATTTTACGAGTGGCTCAA 91968 36 100.0 30 .................................... TAACCTGCCTCTTCAGCCAATCCCTGCGCT 91902 36 100.0 30 .................................... CGTACATAAGTCGATGAATATTTCAGGCGC 91836 36 100.0 30 .................................... TCTTGCTTGCCCTGTATGACATTCCATACC 91770 36 100.0 30 .................................... TTACGAACCGAAAAAGACTGATAGCCCCGA 91704 36 100.0 30 .................................... GAACAATTCTTTCTGCTCTTGCGCTTGGCT 91638 36 100.0 30 .................................... CGAGCATTGGATTGAATTGGTAAGAACATT 91572 36 100.0 30 .................................... TTAACAATCGAATTTAGCGCAGAGATCCTT 91506 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== =============================== ================== 25 36 99.9 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAGCTTAATGACAAGCCAGAAGTCAAATCCATGATTGAAAAACTGGTAGCTACGATTACAGAATTGTTAGCATTTGAGTGCTTAGAAAATGAACTAGACCTAGAGTACGATGAAATCACCATTCTAGAGTTAATCAATGCTCTAGGAGTCAAAGTTGAAACTCTGAGTGATACACCTTTCGAAAAGATGCTAGAAATTATCCAGGTTTTTAAATATCTTTCCAAAAAGAAACTCCTTGTTTTCATCAATGCGACCGCCTATCTATCAGAGGATGAGTTAATAAATCTGATAGAGTATATCCAACTCAATCAACTGAGAGTCTTATTTGTTGAACCTCGAAAAGTCTATGATTTCCCGCAATATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAAGAATTGGAACTTGACGAGCTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : AATATTAAGATTTAATTCAATTCAACCATATTAGCTAGAGGTTGGTGGGGAGTTCAAATGAGAAAGCAGATAGAAAAGTTATTAAACAGCGATATAAGCACAAGCGCAATCGCTAAAGGAGCAGGTGTTCCTTGGTCTACAGTAGCGGACCTTAGAAAAGGGAAAACCAGTATCGATAAAATGGCCCTGCTTACAGCCGAGAAATTAAATGATTTTGCGGAAGAATTAGAAGCGGAAAAGGACGATAAGTTTTACAATTAATCTATCCAAAAACAACCACCTATTTAGGTGGTTTTTTCAGTATCTATCACTGCTTACTAGAAGAAGAACTTGAGCTGCTTGAGCTGTCGCTGCTGGATTCAGAACTGTCTTCTGAGGAGCTGGTGCTTTCAAATTGTTCTGGGTGGAGCGCTCGATAGCTTGGAGCATCAAAGAGGTCAATGGTCGATTCGCCCTTACGTTGGCTATAGAGACTGGTTGATTGGTCTCCTTTTTCTTCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //