Array 1 20387-21147 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXMP01000070.1 Klebsiella variicola strain 7041 07041-contig_70, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 20387 29 100.0 32 ............................. CATGATCTGCCCTCCGATAAACACTGTTTTTA 20448 29 100.0 32 ............................. TCATCCAGCAGGACAAAGCCGGAAAACTCTTC 20509 29 100.0 32 ............................. GCTCAGATATTCAGGAGATAGGTGAGCGCCTC 20570 29 96.6 32 ............................T ATCTCAGTGGAGGAAAATTTTACCAGCACGGC 20631 29 100.0 32 ............................. GGGATCTCATCGTCAAAATCGTGAGCCGGATC 20692 29 100.0 32 ............................. CCAAACGGCTGGGTATAAAGATGGGAACCCCC 20753 29 100.0 32 ............................. GCAATTTCAATAAGACAGCCGTGGGCCTGGCT 20814 29 96.6 32 .....................G....... CTTTCTGCGATAGATTTCATTCGAGTACCCCG 20875 29 96.6 32 .........G................... CTGTACTAGGCCAGACGATGACAACGGATGAC 20936 29 96.6 32 .........G................... ATCCCGTCTGCCCATTTGGAGATTGAAGGTTC 20997 29 93.1 32 .........G.A................. TTCGCGATATCCGCCTGCGCCGCCGCCAGAGT 21058 29 96.6 32 .........G................... TCGAGGCGAAAATTTACGCCGGGCGTTTTCAT 21119 28 79.3 0 .........G.TT..-.........G..C | A [21130] ========== ====== ====== ====== ============================= ================================ ================== 13 29 96.6 32 GTGTTCCCCACGCCAGCGGGGATAAACCG # Left flank : GTGTTGTCGGCAGGCGAAATTGAGCCGCCTCAACCACCGCCGGATATGCTGCCGCCTGCGATACCCGAACCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTAACGGAAAATGTTCCACCTCGCCTGCGAGGACGTCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGCGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTCAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACGAACAGCGAATCAGGTTTTGAGTTTCAAACTTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCTTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAAATTGTTGGAATAAAGTTGGTGAATTGTTGTGTGCTTAAAAAGCTTTTATAAAATAGTAACATATCTTTAGT # Right flank : CGCAACTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGTGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGCTTTTTTGTGTCCTTTTGTCGGCAAGGTATTGATAAACGCCTGGGCGGTGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGACCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATATTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCACCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCGGCGTGAATACGGCAGACCGGCGTCACAAACTCCTCGCTGATAATGTCATCACTAGACTGCTGG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCCAGCGGGGATAAACCG # Alternate repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //