Array 1 135515-134553 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014907.1 Fructilactobacillus lindneri strain TMW 1.481 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 135514 36 100.0 30 .................................... GAAGCAATTCTATGATGTTTTGATCGCAGC 135448 36 100.0 30 .................................... CTTATACTGCTGAGGTTATCAAGTCCCCAG 135382 36 100.0 30 .................................... TATGCTAAAGCATACTCAAAGACTGCTGAT 135316 36 100.0 30 .................................... CCCTCAAGGGTCAAAGAATATTACAATTAA 135250 36 100.0 30 .................................... TGAATCAATTTGAATTCATTTACAAGATAC 135184 36 100.0 31 .................................... CTGATTGTTTTCCAATTCGACCAAGAAGTGG 135117 36 100.0 30 .................................... CCCTTAAATAATCTATGATGAATGTCCTTA 135051 36 100.0 30 .................................... TGAATTCGACCCATTTGTTGTTCCAGTAGG 134985 36 100.0 30 .................................... CAGCCACCAAATCATAATTCAGGTGGGAGC 134919 36 100.0 31 .................................... TAATGAACGTTTCATTAATTCATCAGCTTGT 134852 36 100.0 30 .................................... CTAACAGGATCTACAACAGCTTGACACATT 134786 36 100.0 30 .................................... TGGGCGGACAGCAATTTTAGTCCGGAGACG 134720 36 97.2 30 ................................T... TACGTTAACAACTAATGAAGCTATACGCAA 134654 36 100.0 30 .................................... AAATTAAGTAAAGAGATCAACTTACCGCAA 134588 36 94.4 0 .........T.........................T | ========== ====== ====== ====== ==================================== =============================== ================== 15 36 99.4 30 GTTTTAGAAGTACGTCATTCTAATGAGATTAAGAAC # Left flank : GTTATTTCTAATCCGAATTTGTTTTTACCATTCAAATTAAAATTAGAAAATTTAATTATTGAAGATTTAAATGAAAATGAAAGACAGAGACTTTTTCAATTGGACAGAGAAATTAAAAGTATTTTTTTAGGTGCTTCATATTTAGAAGATATTCCAATGTCGATTGACGAAGAGTGGAGTTTAAAAAAGCTGTATAAATACAGTGGAATCGACGTTTTGAAATCGGCAATCGATAATCCATATGATATAATTAAAGTAGTTCTTAATTCATATAAAAAGTTTTATCCTAAAAAACTAATTGTTCTTAATGTTTTATTTAATTATCTCGATTCCAGTCAAATTAGTAATTTGATTCAGATGATTAAAGATTTAGATTTGTATGTATTAATATTAAACTTTTCTAGTCAACCATATTCCAAGTTGTTTGAAAAGTGCCGTTATTACAGTGTTGATAGTGATTTTGTGAGATTTGATCGCTAGATAGGGTAATATTACAGACG # Right flank : TTACATTAAATTAACAATAATGTTTTTTCTATAAATGTTATAATTATATTATTAATCTTTGAATGTTACATCATTGATTAAAAAATCATCATTTAATTTAAGGAGCTTGAACATGTCTACTTTAACCACTATTGCTGGTATTTTAATCATACCGCTTTCATTTCGTTTATAGTTTGGTTAGTTAAGAAAGTTATGAAAAAAACAACTAAATATTCTGGCTGGTACGCCTTGATTGTAGGGATTGTTGGAATTATTATGTGGGTTATTGCAAATCCAATTTAAGTAGCGTTATTCATTTACGGTACACATTCTATTCTAGATGTGTATCGTATTTTTATTTGAAGATTAAAAATTAGGCACCCTTGAGCAAAGAACAAGAATCGTGTTTTATAAATATGGTATTCTAGTATAAATAAAAGTAGCTTATCACATAATGATAAATCCAAAAGGAGTTTTAAAAATGGCTGACAAACAATTTATTGCTAACAAAGTACTAGAAA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTACGTCATTCTAATGAGATTAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [90.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //