Array 1 3618-5371 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZAS01000069.1 Prevotella copri strain iP105 NODE_71_length_10777_cov_108.839_ID_141, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 3618 33 97.0 34 ................................C AAAGCCCGCTGCCATACCTTTGCACCTGCACGAT 3685 33 100.0 33 ................................. TTTTGGTTGAAGCGTACGTTTGTGTTGCCGTCT 3751 33 97.0 34 ................................A GCGTCAGTTGCGCTCCAGTGAGCTGCCTTCGCAA 3818 33 100.0 33 ................................. TCAACACAAGATGATGAGGAGCTCCTGCTGTCT 3884 33 97.0 37 ................................C TATCAGCATCAGGAGGCGTTGCACAAGGAAGAACTCA 3954 33 100.0 33 ................................. CAGCACCCAGCTGCCGCTTTGCCTGCCAGGTCT 4020 33 97.0 32 ................................A CCGTCAGCGTAACCCTTAGAGGTACCAAAGAT 4085 33 100.0 32 ................................. TACTATTCCCAGATGTCCGGTCTCCTTGACAT 4150 33 100.0 33 ................................. TCGAGACGCAATTTAAGCGAAAGAGAAGAACGC 4216 33 97.0 32 ................................A TATCACTAAGACGTGTAAGTATGTACACATCT 4281 33 100.0 33 ................................. GAAAATACCGCTAGACAATATGAAACCAGTCTT 4347 33 100.0 32 ................................. TTTGGCATTGCCCAAAAGAAGCAAAAGGCTAG 4412 33 97.0 32 ................................A GAAGGAACTGGATAATACCGTGCAGTCGCTCA 4477 33 97.0 34 ................................C CGAAGGTGCTGGAAGGCAACTACGACAACACCAA 4544 33 100.0 33 ................................. GCCATCTCCTGCAACACGCCTCTGTTGCTTATT 4610 33 100.0 33 ................................. TCCCAGTCCTCACGCATACAGAATCCGTATGTA 4676 33 97.0 33 ................................A AACAGGTAATTGGACATATTTGCATACCTGTGA 4742 33 100.0 32 ................................. CAACAAGCACGGCTTAAAGGGAGAATACAAAT 4807 33 97.0 33 ................................A GCATGGTGGCTACAGACTTGGCATTGCTCTGAC 4873 33 100.0 33 ................................. GCAATGCGTTTCACGTTCCGATCTCGGCTTTTA 4939 33 97.0 33 ................................A TCGGGAAACCAGAAGGTTTATCTTCCCAGTGTA 5005 33 100.0 35 ................................. TGGAGAGATTGAAAAACCTTGTTATCGTTGATAAA 5073 33 100.0 33 ................................. GATAAGCAAGCAGACGGAAAATAGAAAGGTTTA 5139 33 100.0 33 ................................. ATCGTGTGACAGAAGAACTTACCATTGACGTAG 5205 33 97.0 34 ................................C TCAATACTGAAACGTTGGTTACAGATGACGATAA 5272 33 97.0 34 ................................G GTCTGTACAAGAATCAGAGAGACCAGTACGATGC 5339 33 93.9 0 .........................A......A | ========== ====== ====== ====== ================================= ===================================== ================== 27 33 98.4 33 GTCACACCCTTCGTGGGTGTGTGGATTGAAACT # Left flank : TGATGATTATCCAGTATTTTTAATCAAGTAGTGTATGTTTGTATTGATTACTTATGATGTAAACATTACCTCGGCTCATGGTGCGAAACGTTTACGCAATGTAGCCAGGGCGTGTTTGAATTACGGAAAGAGAGTTCAAAACTCTGTTTTTGAGTGTATTTTGACGGAATCTCAGTTTTTCGTATTAAGGGACCAGTTAAAAGGGATTATTGATACTGAACAAGATAGTATTAGGTTCTATATTCTTGGGAAAAATTGGAAACGTAAAGTTGAGACTTTGGGTAAGGATATGGGGCTTGACTTTACTGGTGAGCTTATCATTTAATGTATGAGGGTGCGAACCTATAGTATTGCAAAATACCCTATAGTTTCGCACCTTCTTAAAATCAGTGACTTACAAATATTATGCCTTTTATAATATTTTACGTGTAATTATTTTGCCATCTTTCGCAAAATAATTATCTTTGCATCATGATATTCAGCTATTTGCTGAATATGCA # Right flank : AGAAAACAGATTTTATTTTCTGAGCCCACTTGAAAAAGTCATTTTTACGAAAACGTGCCATTGATTGTCAATAAGTTACAATGACAAAAAATATGATTCGGGACTTCTTTAAGTGGACTCAGTTTAGTATTATACAGCAATCTCTAGTTATAAGTGTTCAGAATGTGTCTCCTCCTGCCACAGCATTTGACTCCTTCGGTCACCGCATTCGACTCCTCCAGCCACCGCATTCGACTCCTCCAGCCACCGCATTCGACTCCTCCAGTCACCGCATTCGACTCCTTCAGTTATCGCATTCGACTCCTTCAGCTATCGCATTCGATTCCTTCAGCTATCGCATTCGTCTCCTTCAGCCACTGCATTCGACTCCTTCAGCTATCGCATTCGTCTCCTTCGGTCACTGCATTCGACTCCTTCAGCTATCGCATTCGTCTCCTTCAGCTATCGCATTCGACTCCTTCAGCTAATGCAGCCGTCTCATTCAGCTAACTCTGTCGTCT # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTTCGTGGGTGTGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //