Array 1 14787-13681 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUY010000045.1 Anoxybacillus flavithermus strain WS5292 45_17802_33.1018, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 14786 30 100.0 37 .............................. TAGATCCTTCGCGCGCTAAAGAAGCTTATTATGTTGC 14719 30 100.0 41 .............................. CTTGTAGCTGGCGAGTCATTGTGTCACACCCTTCGCTTTAG 14648 30 100.0 38 .............................. TCATATGGTCACTTTCAACATGCCGTATGTTTCGCATG 14580 30 100.0 37 .............................. CGTTAATCGTCGGGATAGTGAGTTTGTAATCCTTTTT 14513 30 100.0 36 .............................. AACAAGCTATACAGCGTTTATACGCTGAAACGATCG 14447 30 100.0 36 .............................. CAAAGGCGTTTGACGCATACGAGTACAACGCTTTAA 14381 30 100.0 36 .............................. TCAATTTCTTCTGCTAAGTAAACTCTATTGTCATAG 14315 30 100.0 39 .............................. CTTGCCATTGAGCAATATATGCAACAACAGAAGGCTATT 14246 30 100.0 38 .............................. TCATCTTGCCCCGATGGAGTTACTCCCATGTTAACATG 14178 30 100.0 39 .............................. AAAAATAAAAGTAGTGGTTATTATTATGCTTTTTGCTCG 14109 30 100.0 40 .............................. TCGGGAAATTGAAAAAAGTTATCCTAAATTTTTAGCGCTA 14039 30 100.0 35 .............................. TCAGAAACATTATAGGTATGGTGGTATCGCGGTTT 13974 30 100.0 38 .............................. GTTCAGCGTCAAAATCAACATCCCATTCTTCCCATCAT 13906 30 100.0 36 .............................. TACTGATTTCATATGTTTTATTTCTGATTTTCTCGA 13840 30 100.0 36 .............................. TCCGTTGCCCAACTTTCTGAACCATCACTTTTTACG 13774 30 93.3 34 ..C..........................T AATGGAATCACAATGTTGCCTCCTGCTAGATAAA 13710 30 80.0 0 A.......................A.CGTT | ========== ====== ====== ====== ============================== ========================================= ================== 17 30 98.4 37 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GAAGCGATCGATGCAACAAAGCGCCCGCTCGTAATCGGAGGTGTATTCGTACTTATGCTTGCATCGATCATTTTCTCTCACCGCGCCAACACATATTTGCGCAAATTAGACAATGAACAGTAAATTCCCCTGTTTTCGTACAAAGAAAAAACATGTAAAATAAAAGAAAATGGGTAAAGGGGGAATAAACGATGATGTGGATGATTACAGGTCTAGTCATTACAGCTGTCATCGGTTTTGTTATTATCGCGGAAGTGAACGCCGAAGCATAAAACAGTCTCTAAACAGGAGACTGTTTTTAATAAAATTTATTTGTGATAAACTTCACAACTGTCGTCGACCTCCAATCGTGCAAAAACTTCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGCTGTATCAACGGACATAGACTATTGACTGAATTTTCAAATGTATGTATAATGATGTTGTATAGCTTTTCCATGTGTTGATATATCAACGCTTTTTTGGG # Right flank : TTTTGTATTGAAAAGCAGGGATGTTTATGCCCTGCTTTTATTTTTTTGTTACAACTTTGTTACAACTTTCAGAAAAGTATTGCGCAAAAACTAGTTCGTTTGTATCATCAGTAATATGAGGATATTTTTTGAAAAGGTGGATAAGGGATGAAACTACTAACATTTCTCGGCGCGAATGACTATCGTGAAACAACGTATCGTTTTCGGGAGCGTGTGCATACGGCAAAGTTTTTTCTATCTGTCCTTATTCAAGAACTGCAACCAGGTGAAATATACGTATTTATGACAGATGGGGCACGAGAGAAAAACGAAGCACCGTTGCTTGACGAATTAAACCGATACGGCGTAGATGAAAAGAAAGTGCATGCTGTATGCATTCCCGATGGGCAAACAGAAGAAGATTTATGGAATATTTTTTCTGTTATTGCTGATCATGTGTATGAACATGATGAAATCGTCCTTGATATTACGCACGGATTTCGGACGTTGCCGCTCGTTGG # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 17277-15789 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUY010000034.1 Anoxybacillus flavithermus strain WS5292 34_28002_25.7651, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 17276 37 100.0 35 ..................................... TTTTCTATTACTTTAAAGAAAGGAGTGTTATTATT 17204 37 100.0 35 ..................................... CGATTCGCTGCGCTGTTTCAGCCGTTGCGCGTCTG 17132 37 100.0 37 ..................................... ACAAGCATCGCCGAGGTGTTGGCCGACCTGCAAAAGA 17058 37 100.0 36 ..................................... CGTTTAATCTTCTGCCTTTTACGATTTTCATCTATG 16985 37 100.0 33 ..................................... CAGTTTTAAGCTCATTGAAAGAGGGATGTATGG 16915 37 100.0 35 ..................................... TATGTGAATCGTCGAGATCGTGAGTTTGTTATTTT 16843 37 100.0 37 ..................................... AAATTCCATTGCCACTGATCACTATGCACAGCAAAGT 16769 37 100.0 33 ..................................... GATGAAAATTCATAAATACCAAGCGCAATGCAA 16699 37 100.0 36 ..................................... TTAATTCCTGCCCTGGACTCTCACCAAGGCAGGAGA 16626 37 100.0 36 ..................................... CTGCTTTCGCAAGATCATCAAACACAGAGAAATCAA 16553 37 100.0 36 ..................................... CCATTCGAGAACATTATCTTTAAATTTATGCTTCTT 16480 37 100.0 36 ..................................... ACGTACCCAACTTGGCGGATTGAAAACAGTCGGTTC 16407 37 100.0 36 ..................................... AAGTTTATAGATCATTATGATTTTTTTAGCTAAAAG 16334 37 100.0 36 ..................................... AGCTAACGAACCAGCAACAACGCGGAAGATCGGCGC 16261 37 100.0 35 ..................................... TCATCACTTTCTGAAAAAATTGGCGGGTTTTTCTC 16189 37 100.0 37 ..................................... CGTGTCCCGTCCGCCGATACAAACAAATCGCGTTGGA 16115 37 100.0 36 ..................................... AATGCAGGCGGAAAGCGCAGGCGCGACAATTAGCAG 16042 37 100.0 33 ..................................... AAGCGCTTAAACAGGCTATTGACTATGTCATTC 15972 37 100.0 36 ..................................... AATTTCTCGGTCAAATCTTTGCCTAAGTCGCACCTC 15899 37 100.0 37 ..................................... ACCAGCTACATGGGTGTTACTAGGAATTGTTGCATTA 15825 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 21 37 100.0 36 GTTGCACCCAGCATAAAAGCTGGGTGAGGATTGAAAC # Left flank : TGACATATGATGTTGAGACATTGGAGTCAGATGGTCAAAAACGATTACGAAAAGTAGCAACTATTTGTCAAAATTTTGGACAACGTGTGCAAAAATCTGTTTTCGAGTGTAATGTCAGCCAAGCGCAGTTGGAAGAAATGGAACATCAATTGTTGAAAGTTATTGATCTAGAAAAAGATAGCTTACGAATATATACGTTATATGGTCAACGATCCAAAGCAGTTCGCTCCTATGGAAAGGACCATTACATTGATTATAATGATCCGATTATTTTGTAAGAGTAGAACATATACAATATGTGTAGCAGTTATGAATTTTGGTGCGCGAACATAAAGCAATAGTAAACAATCAGGAGGATCGCGATGAGTAAAAAAGGCTTAGTAAAGCGAAGATCCAAAAATTCATCAGAGACTATCTTTAGCCACAATGCACACCAGACAAAACAGTTCGCGTTTTTATACTTTTACACTTGCTTCACGCATAGGATTGAAGCGTAGGCA # Right flank : TGCAGAAGGAAGTATTGCGTAATAACGTATGTGCTGAAACTGTCGTGCGCATGACGATGTTGATCGTGGAACAATTATCAAATAAGTACATGCAACTGTATAAACATAAACAATATGATCCCATTCGGCAAGGGGATTTGCTTGTACGGGAGTTAGAGGAATATGTGAATATTATAAAATATGGAATTTACAAGTAAAGGCGGGGCTTTTCCCGCCTCATTTATTTGTAAGAAAATTATTGAAATTTTCTGTTTTTATATGATATGATATTCTCAAGGAATTTGAAACTATGTTTCGTAATACGCAACAAAAAAGAAAGGGGAATAATGATGGGGGAATATGTACAAGTTGGACGTTTGCAAGTCGCTAAGTTGTTTTATGAATTTATCGTTGAAGAAGTATTGCCAAATAGCCAAGTAGATAAAGATAAATTTTGGAAAAACTTTGAGCAACTCATTAATGAGTTAACACCAAAAAATAAAGCATTGCTTGAAAAACGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCCAGCATAAAAGCTGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.20,-12.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 12250-13279 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUY010000004.1 Anoxybacillus flavithermus strain WS5292 4_83953_26.8668, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 12250 30 100.0 37 .............................. TGTTTAAAAAATATTTGATTGCTGTTTTTGCTTTTTT 12317 30 100.0 35 .............................. TGAGTATTCGCCTTCTCTTCAGAAATGGGTCTATC 12382 30 100.0 40 .............................. AAAGTTGCTTTTATTCCGCGTGATGGTTTTATGAAAGAAG 12452 30 100.0 36 .............................. TTTCGAAAGTGTTTATACATTTTTCCTTTGATATGG 12518 30 100.0 35 .............................. ATTGATGTTTATAACGCATTTACTTCTTCGTCATC 12583 30 100.0 35 .............................. AAAACGTGCCGTTGTCTAATAAAATCGCATCATAA 12648 30 100.0 38 .............................. GGGAAAATGTACAAGATATAAAAATGTCAAACTATGAG 12716 30 100.0 38 .............................. TAAGCGGACGGTATAAGGGATAGCGTAATTATGTGCAA 12784 30 100.0 36 .............................. ACCGTTCTGTTCTTTCAGCTCGTGTTAGTGTTGATC 12850 30 100.0 37 .............................. TCGGTCAATGGCTGTATAATCAAGAAAAGGTCGCGAA 12917 30 100.0 39 .............................. AAAAGATAGGTAATGACTGTATTTTAGCTTGTGTGCCAC 12986 30 100.0 37 .............................. ATGTACAAGCGTTAAAATGGACACAAAAGGAAACGAA 13053 30 100.0 35 .............................. AAAAATGCGCATAGCCGGAAAGACTATACGCATTT 13118 30 100.0 35 .............................. AAAAATGCGCATAGCCGGAAAGACTATACGCATTT 13183 30 100.0 37 .............................. TTCCGCTCACCAATCAGACTATGACTGTCGTTGACCC 13250 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 16 30 100.0 37 ATTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : TATTGTTTGGCTTTTTTGAAACATATGTGAAATTATCAGACGAAGAAGAACGAAGACTGCGAAGCGAGGTGAATGAAATGGAGACGAAAGAAAAAGAACAAGTGATGGAGTTGATTATTTCGTATGAACAAAAGGCGTTGGAAAAGGGAAGAGAAGAAGGGATAGAACAAGGAATCAAACAAGGAATCAAACAAGGGATGAAGCACCTTGTACAAACGATGGCCAAAAAAGGGATGAGTGTAGAAGATATCGCAAACATCACAGACCTTGCGGAAGATGAAGTGCGTGAGTTGTTAGAAAAGGAATAAGTAATTTGCGCATAATTTCACAACCGTCGTCGACCTCCAATCTTGCAAAAACCCCAGGGGATCGACGACAATTTGTTTTTTGCAACTTTTTTAGACGTATCAACGCATCAAGACGATTGACAGAATTTTCGAATGTATGTATAATGACATTGTATAGCTTTTCCAAGTATTGATTTATCAGCACTTTTTGGG # Right flank : CACCTTTGTAAAAATTCTTCAATTACTTGAGCTTTTTCGTTTGGTTTGTATCGTACCTACAAGAACCAGTATGTTAGGGTCTGGATTTTTTTGTATATACCATTTTACTTTTTCTTTAACATTTGTTATAATATAAGGTAGAGAACATCTTTCTTTCCGATTATGGTAAAGTGAGATGTTTTTTTCGTGGAAATATTGATTTCACAAAGAAATGGAGGGATTTCTGATGAAGAAATACGCCATTGTGTATTGTGAACATCAATTTGGTTCCATGGATGGAAAAACAGCGAATGGGCTTGTGCGCGATTCAGGGCTGTATGAGATCGTTGCAGTCATTGATTCGACAAAAGCTGGTCAAGATGCCGGAGAGGTGCTTGATCAAAAGAAAAATGGCATTCCGATTTGTAAAAACCTTCAAGATGCAATAGCCTCCGCAAAAGAAAAACCGAACTACTTCATCTTAGGAATTGCTCCAGCGAACGCTTTTCTCAAAAAAGAAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 128-1035 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUY010000006.1 Anoxybacillus flavithermus strain WS5292 6_61830_31.0579, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 128 30 100.0 38 .............................. ACTTGATTATAGCGATTAATAAGCACGCAAAAGGGTGA 196 30 100.0 37 .............................. CCGCGCGTGACGCACCTTTCGCGACAATTTCGCGAAA 263 30 100.0 37 .............................. CATGAAAAAGTCGATCATCGCTTTTTGCGTGCGTTCA 330 30 100.0 37 .............................. ATTTTTAATTTCGATGAAAACGGTCAAATGTACATTG 397 30 100.0 37 .............................. AATGAAATTCAACAAGAAAATCGCCATTGTGAGCTAA 464 30 100.0 38 .............................. ATGTTTTCATTTTTATTCCTCCTTATTTTTGTATAAAT 532 30 100.0 39 .............................. CAGCACTCGTCGCCCGATTGACTGGCGGAGGTAAGTTGG 601 30 100.0 39 .............................. AAGCTTATCCGATCGACAAAGAAGGTACGCGTGTTTCTA 670 30 100.0 39 .............................. AGTAGAGAACCAAATTTTTCAGCGTATTCATCACGAATT 739 30 100.0 36 .............................. TTTTTGTCCAAGTAAGATTGAACGAACTGCCACAGC 805 30 100.0 37 .............................. TTTTTAACCATACTACTGACTGACCCCTTCAATGACA 872 30 100.0 38 .............................. TAAAAAAAGAGGACTTGAACGCTTTGAGGGAAGCATTA 940 30 100.0 36 .............................. TACGTATGATAGATGAAATTTTGTCTTTTTATCAGA 1006 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 14 30 100.0 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTGGGG # Right flank : CTCGTATTGGTCACTAGTCAGCGCTTCTACAGTAAAAAGTTTGTATAGTACTTAGTTAGTTTGACGTTGGCGGTATTGTGCTTGTCCCTCTTCACTTTCTATATACATCCAAATTGGCATTTTAACCTCTGATTTACGCAGCACACCCGATGCGGCGTAACACCTCATCTGGGTGCTGTAAGACGTGCTGTTCAAAGCGAGTAATGGATTGGGCAATGTCATTTTGATCCTTGTGAAAAACGTTGGCAATCACTTCATCTTTCAACCATTTCCACAGCCATTCAATCGGATTTAACTGTGGAGAATACGGTGGCAAAAAGATGAAATGAAAAGCATCGCCTTCCTCGCCATCAAGAAAGGCTTGCACCATCTTGGCATGATGAATACGCGCATTGTTCAACACAAGCACGAGGAATCGGTCCGTATATTTCTCTTTCAATCGGTGCAAAAAGTCGAGGAACGTTTCGGCATTGGCGGATGATGCGCGATGAAATACCACA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 127-1248 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUY010000071.1 Anoxybacillus flavithermus strain WS5292 71_10193_30.198, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 127 30 96.7 38 .............................T TTGGGCTTCTTTTGGTTGTGACATCTCTTGTTGCGTTG 195 30 96.7 37 .............................T CCCTGTCGGCACTCTTTCGCTTTGCATGCTCGTATGG 262 30 100.0 37 .............................. GTGCTTTCGCTTCCGCTCCCTCTTTTGAAAAGGAAGG 329 30 100.0 39 .............................. TGAAGAAATATAAATATAAAAAATATAGTCTTGAACCTT 398 30 100.0 38 .............................. AATGTATACATTTGCAATCGGATTATCTTCATCTTCTC 466 30 100.0 40 .............................. GCGTTAAAATGATGTTAACATTTGTTGAAAAATGATGTTA 536 30 100.0 37 .............................. ATTTTTCATTTGTATTTTCATCTTCAACTACCTTTAG 603 30 100.0 39 .............................. CGCGAAGCCCGAGCAACGACTTTGGGCGAAGTTTTTCAC 672 30 100.0 39 .............................. TTTGTCTTTGCGCGGGGCTGTTCCGTCAAACGTCAATAT 741 30 100.0 40 .............................. TCTGTGCATTTTCGTATCATTCCTCCCCTGCTTGTCCATT 811 30 100.0 36 .............................. TGTTTATCCTTCCAACGACAAAGAGGTTGTTTATTC 877 30 100.0 39 .............................. TCTTGCCACTAAAACAGGGGAAGGCTTGAAGCGTCTCTG 946 30 100.0 40 .............................. AAGGGTTCGAATCCCTTGCTTTCTCCAAGCATTCAGTTTT 1016 30 100.0 39 .............................. ACCAACAATGAGACGGTCGACGTTTGCTAACATAAACGA 1085 30 100.0 36 .............................. ACAGTTATGTCTAATCTGTCGTCTCCCGAATACCGA 1151 30 100.0 37 .............................. ACGACATTTGTTCAACTTTTTCATACCATATTTACAA 1218 30 86.7 0 ......................G...CC.T | T [1243] ========== ====== ====== ====== ============================== ======================================== ================== 17 30 98.8 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTGGG # Right flank : TTGTGATCAGTTTTATATTTACTTTGTAATGTTTTGTGTTAGGGGTAGTTTCCTTAATTTCCTACTAATCCTTTTTATTTTTTAGAGCGCTGGTCAGCTATCCTCAACCTCTGTTTTTATGTTACTTATTTCAAAGAGTTATATTAATTTAGAAGGAATATATTCCTTTTATGTCGTATTTTATGGTAGGTTAGTTTATTTAGAAACGAGGTGTGATTTTGCTAGCAGAAGCAGTTGTTCGAGTAGGCGAGTCGCTTGTGAGTAGTGATTTACCTTTAACGGAGCGTATTCGTTTGTTAACGGATGTAGATAATGAAGCTTGCAAGAATTTTTTTGAGCACGTCTGGGTTGTGGAATGCATAGAGGAACAAGTGAACGTTCGTTTGATGAGAATAGGAGAAAAGGTGAAGGAAGGTAAAAAAGAAACGTTTGTTGTTGATAGAGCTAAAAACGTTGCCTTTCCTATCATTTATCCTAATGGTGGGAATCCGCTAAATGCC # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 165-989 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUY010000030.1 Anoxybacillus flavithermus strain WS5292 30_30698_39.6901, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 165 36 100.0 29 .................................... TGAAAATATCCGTCCAGCACCTGCAAAGA 230 36 100.0 30 .................................... TTGTACATTATTGATACTTACCCATACAAG 296 36 100.0 29 .................................... AGCAACTGCTATCATATATTGATGATTTT 361 36 100.0 30 .................................... AGAAATTTCTTTAGCTTGGTTGGACTTGGA 427 36 100.0 30 .................................... TCTTTAACTGGCTTTCTCCCTTTTTCTTCA 493 36 100.0 30 .................................... AGCCGAACATGCAGCAAGCTGGATTTTTCA 559 36 100.0 29 .................................... AAAGAAACGCAGGATATATATAACAGCGG 624 36 100.0 30 .................................... AATACTTGCGTTGATACATTCAAAACAATT 690 36 100.0 30 .................................... TGAAGCTGGTGTTGCTGTTGATGTTGTTCG 756 36 100.0 30 .................................... CCATCTTTGTGCATTTCCCATGTCGCGACG 822 36 100.0 30 .................................... GGCTGATCAATAAGCGCATTATATTCGTAT 888 36 100.0 30 .................................... CGGCAATACGGAGTTTATTGGAGAATTTAA 954 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 100.0 30 GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Left flank : ATAAATGGCCCGAATTTGAACGTCCATGATGAGCAAACTCCTTTGCTTTCCTTGTATTCCAAGGTTTTATTCGACAGGAAGATAAAAAAATCCTCCCGATTTTTGTCGAGAGGGTGCGAAATGTGAGGTATGATGTATCCGTCGTATTCTTCAACGGAACGAAAG # Right flank : TACGTGCATCAAAAAGCCTGTAATATGAACGATTACAGGCTTTTTGATCGTTTTAAAAAAAACGTGAGAAGGGGAGAAGAGTTATCCTTCATCCGTTTTTTTAAAAAAGTGACAGTTGCGTTGTTGTAATTGTTTTTTCCTTGGTAGTAGGTTCTCCTAAGAGAAATTGCATTTTTGCATATTGTTTTTCCGTTACGATCATCGCCCGCACTGATCCTTTCGGTGGCAAGTTTCTTTTCAGCCTATTAAGATGTTTATCAACAGATTCATGCCCATTGCAAATCCGACTATATACGGAAAACTGTAACATATCATATCCTTCGTTCAATAAAAATGTACGAAATTGTCTGTAGTGCCGTTTCTCCCGATTAGTGACGACAGGTAAGTCAAAAAACACAAGTAATCTCATAAACTTACTCATAGGTGTGTATTTGAATAGGAAGAAGTTCCGGCAATTTTAAAAACGAAGGTTTTTCGTTTCGACTAGCTGTTACGAAGCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //