Array 1 46278-44930 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKGL01000016.1 Acinetobacter baumannii strain J15 J15.fa_114_length_189042_cov_16.437983, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 46277 28 85.7 32 C.AAA....................... CAACTGGTGAACGTGCTCAAGTAGTTATACCG 46217 28 100.0 32 ............................ ATCAGCCGTTTTGCCTGACTTACCAACGCCGT 46157 28 100.0 32 ............................ TACAGACAAGCCATTTACAGAAGTAACACAAA 46097 28 100.0 32 ............................ GTCATAGTCCTTCTGAACACCAAATGTATAAG 46037 28 92.9 32 ...TC....................... GGTATTAGTGCGAATTGGCTTTTAGCCCACGC 45977 28 89.3 32 ....C.......GT.............. GTGTTTTTCGATATGCTTCGAAAGGTCATCCT 45917 28 89.3 32 ...TC.....A................. TGATGGTTCAGCATATATAGCTAGACGTACAC 45857 28 82.1 32 ...GC......TGT.............. ATCACCAAACACAACCAAAGGTGAACGGGTAT 45797 28 92.9 32 ...GC....................... TTATCTGCCATACCCGACTGCTTTGTTCCTAA 45737 28 85.7 32 ...GC.......AT.............. ATTTTTATTCCAAGGGCTTTTGCTTCTTGTGA 45677 28 82.1 32 ...GC......TAT.............. TTCAAATGATTTAATGAGCTTGTAGCCATTTT 45617 28 85.7 32 ...GC.......TT.............. ACGTCTTCTAATGATGGACTTTAATCCAATAT 45557 28 85.7 32 A..GA.......T............... ATCTCACTGAAGATATGACCATCACTTTCTTC 45497 28 89.3 32 ..CGC....................... TTTATAACCACCAGTTAAAGTATTGACTAAAA 45437 28 75.0 32 ...GC.G...A.A..AT........... ACAATCGGGGACGTGGTCAAAAAGATTATCAG 45377 28 89.3 32 ....A.......AT.............. GTGTTGATGTTGTTGTTCAGATCGTTTTTGGT 45317 28 85.7 32 ...GC....T..T............... GACATGCGAGCTTTCATTTAAATGTGTCATCA 45257 28 96.4 32 ............A............... ATTAAAGCATTTTCATATGAGCCTTCCTCATT 45197 28 92.9 32 ....A......T................ TTCGGATCAGTCCAGTCATCATCCTCGTCAAT 45137 28 82.1 32 T..GT.......GT.............. TATCATTGCGCGACAGAACGCATCAATTAATG 45077 28 92.9 32 ...GC....................... AGATCTATGCAAGATTTATTGGTCTACATTAG 45017 28 89.3 32 ...T........AT.............. CAAGCTGATGCTTCCTTATGGTTACAGTCAGG 44957 28 75.0 0 ..CGC.......AT..........AT.. | ========== ====== ====== ====== ============================ ================================ ================== 23 28 88.7 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : CGTGTGCAAATTTATGTTTTGCTCCGACAACCCATACTAGCTTCATTCTTCGCACACCAAAATTAATGTAAGCAGCTACCGCAGTTTGTCGGGTGGCTACTTTTTTTAATGCGCTTCGGATTTCTTTTAAGCCGTCCATTGTCATTGGTGCTTGCCAAGACGAATCTCCTGTACGAATAGCATAGCTATCCAAAATTGCTCTTGTTTTCTTTAAAGCTCTTTTTTCACAAGCAGAGATGAGAATGACATGCATAGTTTATTGTTAAAGTTTGAATGTAATAAAAATATAATCTTTTGTTTTAAAAAGAGAAAGTTTTTATCAGCTTAATACGGCCTTTTAACGACAAAATACGTCGTCTTAAATTTTGAAAGGAACTCTTTTAAATCATCTATGCGATGAATAACCCTGTGAAGGACTCTGATCACATCTAACGCAATTTCTAAATCATCTGGGCGATGAACAACCTCATTTCCACCGCCGACTAACGGCACAATGATTT # Right flank : TTTGAATCTTAAAAGAAAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATTTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 4.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.44, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.19, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.87%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //