Array 1 6217-3262 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOST01000031.1 Cutibacterium granulosum TM11 contig031, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6216 29 100.0 32 ............................. CGGCCGGCCGGGATCGTTGCGGATGTCACCGT 6155 29 100.0 32 ............................. ACACCCCACCGCTCGGCGAGATGACTATGAAC 6094 29 100.0 32 ............................. TGGTGGTCAACGATCAAGGTCTCTGGGATGCC 6033 29 100.0 32 ............................. CACGGTTCACCGTCAATGGTTACGACGCGGAC 5972 29 100.0 32 ............................. CCCGGCCAGCCACCACCCTCCGTCGTGTGCAG 5911 29 100.0 32 ............................. AGGGCGATCCAGCTGTGCCACCAATGCCCACT 5850 29 100.0 32 ............................. TTTTCCTCGATACGATCGTTCGAATCACGAAG 5789 29 100.0 32 ............................. CCCGGCCAACTGCTGCCCTCCGTCGTGTGCAA 5728 29 100.0 32 ............................. TGGACTTGAACCATCAAAATATGGGATCTGTG 5667 29 100.0 32 ............................. CGTGACCACTCCGCCGCGGTCATGCGATGGTT 5606 29 100.0 32 ............................. TTCCTCCTCGCCATCAAGCAGCTCATCCCAGA 5545 29 96.6 32 ............................T TCCGGGTCGATGCCGGTTCCGGCGGGATGGTC 5484 29 100.0 32 ............................. CGTACATGCCACAGGCCGTGATACAGCCACAG 5423 29 100.0 32 ............................. TTCGTCCGCACCTGTCTGGGACGCAGCGCCCC 5362 29 100.0 32 ............................. GCACCATGAGGTGCTCGGCCTTCTCCGTCAGG 5301 29 100.0 31 ............................. CTCGACATCCTCAAGGCCCTGTCCAGGCCCC 5241 29 100.0 32 ............................. CACCCGGATCGACTCGACCACCTTCCGAGACT 5180 29 100.0 32 ............................. GCACCCCGCTGATCATTGGTGGCAGGCGGGTC 5119 29 100.0 32 ............................. GAATCCAAGGTGCGGATGGCTCGCCCCGATCG 5058 29 100.0 32 ............................. CGACGCCGCGGATTCCGACGACACCACATCCG 4997 29 100.0 32 ............................. GGGGAGCTACCGCGCATCTTCCGGGAGAGCAC 4936 29 100.0 32 ............................. GACCCTGCGCACCCAACTGGAAAGCCACCATA 4875 29 96.6 32 ............................T CGGGTCTGGGGCACACCAGTGACGTGATCGCC 4814 29 100.0 32 ............................. CTGGCGACCAAAGGCGCACAGGAACGAGCGGC 4753 29 100.0 32 ............................. CCAGACCGCATCGTCTGCATCAGAAACACGGA 4692 29 100.0 32 ............................. TTTGTGTGTGGAGCTCGTGGCGTGGGTAAAAC 4631 29 100.0 32 ............................. GCGACTGGGACGCCACATGGCGCAACTGGATC 4570 29 100.0 32 ............................. TCCCGCTGCCTCATCGGCCCCGACATGCGCCG 4509 29 100.0 32 ............................. ACCTGACTGCTCGGATAGCTCGCGCACAGTGT 4448 29 96.6 32 ..............A.............. AACCCATCAAGATCCGACGATGCAGCTTGATG 4387 29 100.0 32 ............................. TCATGGATTCCTCCTGGGACCGATGATAGTAA 4326 29 100.0 32 ............................. AGTGATGATTCCGGCCCCAATGACGGAAGACG 4265 29 100.0 32 ............................. GCGCCAGGACCGTCCCGATACGGTTGACCAGC 4204 29 100.0 32 ............................. AAGCACGCCACCATGACTCGGGTGTGCGACCC 4143 29 100.0 32 ............................. AAGTCCAGCGACGATGTCTCTGGCTGCGGGAG 4082 29 100.0 32 ............................. AGTGTTGCCAACAGCTCATCTTTCACGTCGGG 4021 29 100.0 32 ............................. AATCCACTCTCCATGGCTCGTTGAGACGGCAG 3960 29 100.0 32 ............................. GAGTCCGGAGATTATGCGACCGAGGCCACCGA 3899 29 100.0 32 ............................. GACACCGAGGCAGCCGAACTACTGGCAGGGCT 3838 29 100.0 32 ............................. GTGCCGTCATTGGGCACATACCAATTGTCCCA 3777 29 100.0 32 ............................. TCCGGTGTGGTGAAAATCACCAGATCCTCGGG 3716 29 96.6 32 .......T..................... CGCGTCCAGGTCGAAATCGGCGGCATAATCTC 3655 29 100.0 31 ............................. ATCAGATCGCCTGCCGAGGGGGTGTGTCAAC 3595 29 100.0 32 ............................. CCGGGCCACCGGGCCAGCCGTCGACATTCACC 3534 29 100.0 32 ............................. GTTCCCGTGCGATAAACCCTGTTGAGACCCAC 3473 29 100.0 32 ............................. GCATCGCCGCTAAGTTCGTCATCGTGGCCAAC 3412 29 100.0 32 ............................. GGACCGGCGATCGCCTACGACGTCCTGGTGAG 3351 29 100.0 32 ............................. TTCTGTCCGGCCTGCCACCGGAACGCCTCGCA 3290 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================ ================== 49 29 99.7 32 GTCTTCCCCGCCTACGCGGGGGTGAGCCC # Left flank : GACGCTCCGGGAGATCCCGATGACGGATACGGGTGGGACGTCGTCGACCTGTGGGACGACCGCGTGGGTACGGTCGCCTCAGGGAGATCGTGGGCATAGCCGTGGTCGTGCTCGTCCTCACTGCCTGCCCTGCAGGGCTGCGCGGTCATCTCACGCGGTGGCTGCTCGAGATCAGTCCCGGCGTGTTCGTCGGGCATGTTCCTGCACGGATCAGGGATGCCCTCTGGAGCCGAGTCGTTGAAATGTGCCACGACGGGCGGGCGATCCTCGTGTATTCGGTGCGCGGCGAGCAGCACTTCGAGTTCCGCGTGCATCGACATGACTGGGACGTCGTCGACTTCGACGGGCTGAAACTCATGCAGAGGCCAAACAATAGGGCACACACCTCGACACTGCGGCCAGGATGGAGCTCAGCCGCGCGGCGACGTAGGACGACCAAGCGCTAGATCGAGTACACTTGTATCTAGGCAAAGCTCCTGCATCAGCCGTAGTCGGCTGGT # Right flank : GTCGGCGCACTGGCGACCGCTGCCGCTGAGCTGGCCATTCATCATGACTCCCATCGGATACGAGGCCCGTTGTTGATCGTCATGGTCGTTGCGGTCGCTATCGGAGGGATCACTCAACTGGTTAGCGCACTGCTGTAACTCATCATCTATAGGAGAAGGACAGGCACAATGAACAGACTTCGGATCATTGGCAGACTCATGGCAGGTATGTGCCTCTTGACCGGATGCTCGCATACGCAGTCCACCCCGGCACCCTCTCCACGCGACCCAAGGCGATCAGCGGCCAGCACTCCCGCTACGGCGGCGAGCAGAAACACCGCGCAGAAGGCGGCACCGTTCAGTGGCGCATGTGTCAAGACCGACAAGATCGACCTCAAACGAGTCGATACAGCTCCCAAGGTTCAGTGGATCAAGGACGGCAAGACAGGAATACCTCTGACGAGCCAAGGCCCGTTCGAGGTATCCGGCGATGACCAGCGCTGCTTCTCTCCGTCACTGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCCTACGCGGGGGTGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCGCCTATGCGGGGGTGAGCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //