Array 1 1234031-1235322 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP012288.1 Pediococcus damnosus strain TMW 2.1535 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
   1234031	    36	 100.0	    30	....................................	GTGATACCAGTGCCGTTTAACGCTGACATC 	
   1234097	    36	 100.0	    31	....................................	ACTTTCCAAAAGCCAAGAAAGCTGGTTGAAA	
   1234164	    36	 100.0	    31	....................................	CACTTCCACATTTTTGGCACCATCAAACGCA	
   1234231	    36	 100.0	    30	....................................	CATAAAACATGATAAAGACGTTCAGCATGA 	
   1234297	    36	 100.0	    30	....................................	TATTATATGCAGATCCTAATGTTGAACTAA 	
   1234363	    36	 100.0	    30	....................................	CACTGATTAGTTTGGTCTCACAATCCAAGC 	
   1234429	    36	 100.0	    30	....................................	ACGCAAGACCAAATTGATTCTGGCCCAGCA 	
   1234495	    36	 100.0	    30	....................................	ATGGACGTTCATGTATGGCTCATTCTCAAA 	
   1234561	    36	 100.0	    30	....................................	GCCCGTTTGGGTTTGGCCTTGAACATAATC 	
   1234627	    36	 100.0	    30	....................................	TGTATTACAGGGTTTACATTGCCTACGCGG 	
   1234693	    36	 100.0	    30	....................................	AAAAGTTTGTGCTGCCAATGGCAGGAACGT 	
   1234759	    36	  97.2	    30	..................................T.	CATTAACAATCGCAAACTCACCATTTCCTT 	
   1234825	    36	 100.0	    30	....................................	GTTTGTCCGAACCGTGCGTCATGCACATCT 	
   1234891	    36	 100.0	    30	....................................	TACTCAATCGCAAATTGATTCCGCACCGGA 	
   1234957	    36	 100.0	    30	....................................	ATCTTATCTGGCATTTCATCACACATACGT 	
   1235023	    36	 100.0	    30	....................................	CTGACCATAAAGCTGTATCAGCAACCACCA 	
   1235089	    36	 100.0	    30	....................................	CCGGTCGTCGTCGGTTAAGTACCACTCATG 	
   1235155	    36	 100.0	    30	....................................	GTGTGGCGTTGGCTAACGTTGTTGAGGGCA 	
   1235221	    36	 100.0	    30	....................................	TAATGTAAAAAAGCTTGACTGTATACACAT 	
   1235287	    36	  91.7	     0	.................................GAA	|                              	
==========	======	======	======	====================================	===============================	==================
        20	    36	  99.4	    30	GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC	                               	       

# Left flank :   AGCAGATTTAAATAAAATGTTTCAAGGACAATTACAAAAAAAGATCGTTTCGAAATTAGATGATGATACAAGATTGCAATTAACGGATCTTAATAATAAATTAAAATCACTTATTTTTGATGCTACGTTTTCGTTAGACCTTCCGTTAAAAGTAGATAGTGAATTTGATCCAGTTAAATTAGTTAAATACTGTAATGTTGGGTTTGTAAGTGCTTTAAATAGGGATCCTTATGATATAATTGAAACTGTATTAAAAACTGCTTCTGAATTAAAAGAAACAAAAATATTAATCTTAACTAATGTGCGCAATTATCTCAGTGTCAGCCAATTTAATGAATTGGTGAGTTTAATTAGCACGCTTGATTTGAACATTCTGTTTATCGAATTCTCAGATAACAGATAATCACGAAGAATTCGATAAATGCCGTTATTGCTACGTTGATCAGGATTTTGTTGATTGGCGTTATTAATGTCTATGAGAGTAGCATTATAAAAAAACG
# Right flank :  ATCAGGAGCGGCTTGACGCATTGAGGTAAAATAGTTTTAATTATTATCGTATATATAAAATAAATGAACCTCAATTGCACCAAAATCTGAACTTCATTAAAACAGAAAAGAACTACACAAGGAGCCAAGTATGCAAGTAACAGTAAAATCATTTTCAGAGTTATCCAATACAGAACTATTTAAAATCTACAAACTCCGTACCCAAGTCTTTGTTGTTGAACAATTATGTGCCTATCAAGAGGTAGACGATGAGGATCTCATCGCCCAGCATTTACAATTTACAAACGAGGCCCAACAGTTAGTGGCCTATTTACGAATCATCCCTGAAACGAACGAAACGATTGTTCATATTGGTCGGGTGGTTGTTAATCCACTCTTTCGCAAACAAGGGTATGGACGCAAACTCATTACGAGTGGACTTGAAACGATTAAAAAAGATATGCCAAAGGTCACAACGGTAAAGATTCAGGCCCAGGCTTATTTACGATCCTTTTATCAAT

# Questionable array : NO	 Score: 3.23
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//