Array 1 704586-708701 **** Predicted by CRISPRDetect 2.4 *** >NC_016002.1 Pseudogulbenkiania sp. NH8B, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 704586 29 100.0 32 ............................. TCGCTGCCGCGGACTACATCGTCACGGCTGGC 704647 29 100.0 32 ............................. TCGCGGTCCTGGTGCGCGGTCCACGTGCTGGC 704708 29 100.0 32 ............................. GTGAAGAGCGACGACATCGCCATCGTGGACTA 704769 29 100.0 32 ............................. TAGCGCGTCATCGTCTAACCGCTCGCCCTTGT 704830 29 100.0 32 ............................. CCCCCGCCGCAGCGAATCCCGTCCCTCACCTA 704891 29 100.0 32 ............................. GACGCGCCGCAGTACGCCGGACCGGCAGGGCA 704952 29 100.0 32 ............................. TCATTTCCGAACCCACCACGACCGCCCAGTCC 705013 29 100.0 32 ............................. CCAATGGCAAAAGTTGCATAGGGCGACAGCAC 705074 29 100.0 32 ............................. ACCGACGCCATGATGCGCAAGTTTGCCGAGCA 705135 29 100.0 32 ............................. GCACCACCCGCCGCGCCCGGCGTCGCCACCTC 705196 29 100.0 32 ............................. CCGATCGGCTTGCTATAGAACCGGCTGAACTT 705257 29 100.0 32 ............................. GTGTGCCGGGTCTGGTACTGATTTCGATAGCG 705318 29 100.0 32 ............................. CTCTATGATCTGATGGCACGGCTCCGTGAGGC 705379 29 100.0 32 ............................. GCTGCCCCAGTTGGTGCCATCGGCTGTCCCCT 705440 29 100.0 32 ............................. CTGATCCAGTACCCGGTATCGTCGGCCGCCTC 705501 29 100.0 32 ............................. TCGTTGGCCGACGTGGCGGCATCGACGAGCGG 705562 29 100.0 32 ............................. CGTTCCCTTGATAAAGAGGTTGATTGGGCGGT 705623 29 100.0 32 ............................. TTCTTCGAGCAGCAACGTTTGGTAGAGCGATG 705684 29 100.0 32 ............................. ACTTATCCACAGGGTTATCAACAGGATGCCCA 705745 29 100.0 32 ............................. TTGGACGAGATACAGCGGGCGCTCGCCAATAA 705806 29 100.0 32 ............................. ACACCACGTGTTGTTTGGCGGACTGGAGCGGC 705867 29 100.0 32 ............................. CACTGCGTCTACAGCATGGACTCGCCGCATGA 705928 29 100.0 32 ............................. ACGTGGCGGAACACGCAGGTGGCCTTCTCGCC 705989 29 100.0 32 ............................. TCGCGTTGTTCGGTCGCCAGCAGAATCCGATC 706050 29 100.0 32 ............................. TTCACGTTCCACTTCCGAGCCGCGTTGTTGAT 706111 29 100.0 32 ............................. TGGTTCGGCCTGATCGACAAAGACCAGACCCT 706172 29 100.0 32 ............................. ATTTGTGTTTCCGTCTATCGAACGTATGTCTC 706233 29 100.0 32 ............................. CAGTACGACAGCACCGGGGCCAAGATCGCGGC 706294 29 100.0 32 ............................. GACGCCGCCAAAGCCACCGGCGTGAAGTTCTT 706355 29 100.0 32 ............................. GCGGCGGCGACGTGATCAACAAGGACGCCGAG 706416 29 100.0 32 ............................. TAGCGGCCCACCTCGCACAAGGCCCACGTGGT 706477 29 100.0 32 ............................. TTCAGCCGGCCCTCGCTGTCGAACGTGGGCTT 706538 29 100.0 32 ............................. GCGCTGGAACCGTCCGCCGGGCATGGCGCCAT 706599 29 100.0 32 ............................. TTGTCGGCGGTCGGGCGGGATGAGTCGTATCA 706660 29 100.0 32 ............................. TCACCCAACGACGGGACGGGCATCGCAAGGGG 706721 29 100.0 32 ............................. CGGGCACAAATGATGCTGTTCCGATGACACCG 706782 29 100.0 32 ............................. CCAGAGCAGCATTCCAGGCCTGGTCGGAGTCA 706843 29 100.0 32 ............................. GCGACAGACAGCAGAAAGCCCCCAGTGATCGG 706904 29 100.0 32 ............................. TTTGTCCGCCATCCTGGCGCTCGCGGGAGGAG 706965 29 100.0 32 ............................. GCGCCGTGGACAATTGAGCCGTCCACTCCCCA 707026 29 100.0 32 ............................. TTGGCCATGCAGCGCGGCATGTACGGCGCGGT 707087 29 100.0 32 ............................. TCGCGCTGCCGAACAGCTCGAAAATCTACTAC 707148 29 100.0 32 ............................. CCCAACAGGTGCAGGCGCTGGCCGATCAAGCC 707209 29 96.6 32 ............................C CCCGCACTCGCAACGGTAAAAACCGCGAATCT 707270 29 100.0 32 ............................. TATACGGGTCAATATTTCTATGGCTGGTCGTG 707331 29 100.0 32 ............................. ACTTGGCAGCCATGCATGGCCACTATGGCTAT 707392 29 100.0 32 ............................. ATCGTGCGCGAAGGGCTGCAGGGTGGCTGGAT 707453 29 100.0 32 ............................. CCGCCGCCCGGCTTCGGCGCGGTGCGCTGACG 707514 29 100.0 32 ............................. ACGACGTCGGCGAGCTGATCAAGCGCTGGCAG 707575 29 100.0 32 ............................. CCATCTGAGGCCAGCTTGTGGACCCTATTCGC 707636 29 100.0 32 ............................. TAACATCGAGGTAACTTAGAGGTAATCAGGTT 707697 29 100.0 32 ............................. GAGGAGGCCCGCCAGAAGCGCCTGACGCTGGA 707758 29 100.0 32 ............................. CGGTATGGCGATCGACGCGCACGACCCCCAAT 707819 29 96.6 32 ............................C GTATGACACGCAAAAACTCTTTGGGGCTGGTG 707880 29 100.0 32 ............................. TGGTGCAGCAACTCGGCAAGGTCGCTGGTGTT 707941 29 100.0 32 ............................. CCCTATCGGGTCGCCCTCGGCCTCCTCAAGTG 708002 29 100.0 32 ............................. CCGTAGGCGTCGATTTCGTATAGCTTTAGAAC 708063 29 100.0 32 ............................. TTCCAGCCCGATGCGCACTACAAGCAGCGGCT 708124 29 100.0 32 ............................. ACAACGAAATCCCCGCCCAAGTTGTCGACCAG 708185 29 100.0 32 ............................. GTAAGTGCGCAGTCCCTAATTAAATTATTGCC 708246 29 100.0 32 ............................. TGGAAGCGAAACATGCAAGAGGCTCAGCAAAA 708307 29 100.0 32 ............................. CTTGACAAGACCTCAGGCGTACAGGGCGCGTA 708368 29 100.0 33 ............................. TAGCCAACGGCGGCCATCAGCATCTTGGTGTAG 708430 29 100.0 32 ............................. AACAGGACGGGCAACGGTCATGCGACTAGGCC 708491 29 100.0 32 ............................. CCGTTCGCCATCCTGTCAGGGATCTGCGCCGT 708552 29 100.0 32 ............................. GGCGAGACGGACCAGCGCTTTGCCGAGCAGGC 708613 29 100.0 32 ............................. ATGAAGCGCTTCCAGCCACGTGAGGAAGTACG 708674 28 89.7 0 A.....................-...G.. | ========== ====== ====== ====== ============================= ================================= ================== 68 29 99.7 32 GTGATCCCCGCGCCAGCGGGGATGAACCG # Left flank : CCCGACATCGAGGCCATGCTGGATGCAGGCGGACTGGAAAAACCGGTCCCCGAAGGCGTGGTCGATGCCGCCATTCCCAACGAGGAGAGCCTGGGCGATGCTGGTCATCGTGCTTGAAAATGCCCCTCCGCGTCTGCGCGGCCGCTTGGCCATCTGGCTGCTGGAGATCCGTGCCGGCGTTTACGTGGGCAACTACAACCGCCGCATCCGTGATTACCTCTGGCAACAGGTGGAGGAGGGGATAGAGGACGGTAACGCCGTCATCGCTTGGCAAGCTCCCACCGAAGCCGGTTTCGACTTCATGACGTTAGGTGAAAACCGGCGTATCCCGGCCGAATTCGACGGTGCCAAACTGGTGTCCTTCCTGCCGCTGGACGACGCCGACACCGCTTGAATCTCCCTTCTTTAACAATCTGAAATTCGGCTTGAAAACCGGAGGAAAAAGCGGTAGATTTTTGCCTCCCCGAATAAGCCTTATGGTTCAAAGGTTTATTTTTGGT # Right flank : GTGGATCGCCTTGCAAAAGGTCTACCATACCGGGTGCCGCATTCCCCCACGGTCTTGAACAGGCGCAACAGGCGGAGGTACATCGCTGACCCGGGCGAGGGAGTGTGTCTTGCTGATGGGTGAGTAAAATCAAAACTGAACGTAAGAAGAATGTGATTTAACTCGCCTTGCAGCTTGGTGCAAGCTAGGCACCGCTTCTTCCACTTCCTGTGCCACTTTACCGTTTCGGGAGCCGTGCCATGAATTCCCCCCAGCCTGCCGTTCCGCCTGTCGCCGCCGGTCTCGATCTGCGTGCGCACTGGATGCCGTTCACCGCCAACCGCAATTTCCAACGCGACCCGCGCCTGATCGTCGCCGCCAGCGGCAACTACCTGACCGACGCCGATGGCCGCCAGATCTTCGACAGCCTGTCGAGCCTGTGGTGTAGCGGTGCCGGCCATGCCCGCAAGGAAATCGCCGAGGCGGTGTACCAGCAGCTCGGCACGCTGGACTACTCCCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGATCCCCGCGCCAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGATCCCCGCGCCAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //