Array 1 6186-8611 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRZH01000021.1 Bacteroides fragilis strain AF14-26 AF14-26.Scaf21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 6186 47 95.7 30 ..........A...C................................ AAATATTCCTGATTCAAACTTTTTAGTTGC 6263 47 100.0 30 ............................................... TGCTTAAAGGCTATTCCATAAGTCAACGTA 6340 47 100.0 30 ............................................... CGTTGTCATTTCATCCAGAAAATAGACGAA 6417 47 100.0 30 ............................................... AGAATAGAAAACATCAGCTTGAGATGCAGC 6494 47 100.0 29 ............................................... AAAGAGGCTAATTATCGGTTACCCGGCAT 6570 47 100.0 30 ............................................... GATGCAGGAATTATTCGCGGTGAATTAATG 6647 47 100.0 30 ............................................... TCCTGCTCCCGGCACTTCCTTTGTGTTAAC 6724 47 100.0 30 ............................................... CAACTTCGTTTCCACATCTTCAGCCCACTC 6801 47 100.0 30 ............................................... GATGAAGATGTAGTTGACCTATATTCGTCT 6878 47 100.0 30 ............................................... CAACGCTGACCTGCAAGGCACCATCAACGG 6955 47 100.0 30 ............................................... ACTCAGATTCCAATGGTGACAGGTTTTTTA 7032 47 100.0 29 ............................................... GGATTCAGACCGTTTGCCGGATTGTTGTA 7108 47 100.0 30 ............................................... TATCCACGACTCCCAAGATTACGAGGATAA 7185 47 100.0 30 ............................................... AATCGGTTTCGAATAATACAAACGACACAG 7262 47 100.0 30 ............................................... CAACGAGCTTTAACAAGGTCTTGCGACCAG 7339 47 100.0 29 ............................................... GACATCACCAAAGTAAACGGTCGTGCAGT 7415 47 100.0 30 ............................................... ATTTTGTTTCAGTTTAGAAAACACTTTCAT 7492 47 100.0 30 ............................................... ACATGAAAACAACGGTGTTGCAAGGAACAA 7569 47 100.0 30 ............................................... CCTTCGTTTGGTTGGATAGGTTCACTACCA 7646 47 100.0 30 ............................................... AGTGACTTCGGATTAACTCACATTGCCTCA 7723 47 100.0 30 ............................................... ATTCAAAAGACGCTTGACGAACAAATGAAT 7800 47 100.0 30 ............................................... CCAATCGAACTGTCCGCTGCTTGTGGAGTT 7877 47 100.0 29 ............................................... ACGTTGTTAGAGCGAAGACCATTGTTTGA 7953 47 100.0 30 ............................................... TGCCGAGGTCGATTTGAAGTTGGCAATGAC 8030 47 100.0 29 ............................................... CACTTATTGCAATGTGTTCCGTCAAATAA 8106 47 100.0 29 ............................................... CATTTTTTAATGTAATCTTTTTCATATGT 8182 47 100.0 29 ............................................... TACCTTTAGCAGAAGAAGCGTCAATAATT 8258 47 100.0 30 ............................................... GGCCGCACAAGTGTAGGCTTTCCATTAAGT 8335 47 100.0 30 ............................................... CATCATCCATTGCGGACAATAACTTGAAGC 8412 47 100.0 29 ............................................... GATTCAAAGCAAGTTCACGGAGGATATAA 8488 47 100.0 30 ............................................... TCTTCTGATCGCAAACACTTATCGGCTATG 8565 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 32 47 99.9 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGT # Left flank : GGGAAAAGGGAGGACCAAGGAGACACATTATTATAATATATAGAGGGGGAATACTTGGAAAACAAGGAGGGGGGATTCATTGGGGAGGGAGAGGAAGAAGGTTTTTTAGTAGAATTGCGGAGAAAGATTGGGAATTTGGCGTTAACATTGTTAATGCGATTGAAAGGGGAATTTGTTTCAGGAGCGGAAATAACAAGGCTTTTGGATTGAAAAGACTTATTATTTGAAGATAAAGGACTTGATTTAATAGGGTGTTAAATCAAGTGATAGGAAAAGAAGAAACAAAAGGGAGAAATGGATTGAAAATGAAAGTAATAGAGGGACAATGAGTTATTTTTCGGAAAAAGGGATAAGTGGTGGACAGAAAGTGATAGTTGTGATTAGAACAAGTATGATTGTAGAGGATTTTTAAAGGAAAGGTTTAAAGTGGAAACGGAGGAGTACAATTACGAAAGACCATTGGAAATAGCATATGCTATCTGATGAAGACAAAGCGATGC # Right flank : TTATATCCCGCATAATAAAATGGTTTTCAATAAGTTAAGAGTAAATCAGAAAAAAGAAAAAGAAGACTATTTCCAGCATAAAATCTCGTATTAATGCGAGATTTTGTTTTCTAGAACAACTCCAATTGCTGTCCCGGCGTATTGACATCTTGCACTTTCTTCCCATAAAAAAGTTCTATATCCCCAAATTGTTTATCTGTAATACACATGATTCCGACATGCCCAAATTCAGGGAGAAATGATTTAACTCTTTTTATATGTACTACTGCATTCTCGCTACTGGCACAGTGACGCACATAAATGGAAAACTGAAACATCGTAAAACCATCCTTTTGTAGATTCTTTCTGAAATCTGCATAAGCCTTTTTCTCTTTCTTCGTCTCAGTTGGCAAATCAAAAAGAACAAGCACCCACATAATACGATATTCATTAAAGCGATCCATAATCTATCGTTCGGGATAAGAAATTCTCCGAAGCTCTCCATTGAAACATTTATAAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //