Array 1 15927-17216 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKKD01000013.1 Lactobacillus jensenii strain ATCC 25258 NODE_13_length_44406_cov_24.997610, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 15927 36 100.0 30 .................................... ATTAGGATACTGTGTAGGATATACCTTCCA 15993 36 100.0 30 .................................... TTGTAAAATTTGTGATAATGATTTTCGTGT 16059 36 100.0 30 .................................... TTCCAATGGTGAAACAAGAGTTATCAAATA 16125 36 100.0 30 .................................... TGTTGCAAGCGCCGACCCTTATGGTGGTAT 16191 36 100.0 30 .................................... AGTAGCTCAACAACTTCAAAGCGAAGTTGG 16257 36 100.0 30 .................................... TTTTTGAGCTGTTTTATCAAGCCAAGAAGG 16323 36 100.0 30 .................................... GGATACTGGCAGGCCTTCCATTTATCAGTT 16389 36 100.0 30 .................................... TGTTTAAAGTAGTAAACAAGACTATTGAGC 16455 36 100.0 30 .................................... CTCTATTTTAATCTGCATACATACATGTAA 16521 36 100.0 30 .................................... AAGACAATACGTAATAAGGATATTGCACAA 16587 36 100.0 30 .................................... AATATATCAAGCCTGAAGCATTAGATGGCT 16653 36 100.0 30 .................................... ATATCTTTGTGGTTCAACATGGTTGTGTAT 16719 36 100.0 30 .................................... GATGCAGACCATGCATCCCTGGTACACCAC 16785 36 100.0 30 .................................... TAAGCTTGAATTAGCATTAAGAGAAGGTTA 16851 36 100.0 30 .................................... ACTACTTTCAATTTCTCTGTCAAGCTTCTT 16917 36 100.0 30 .................................... TACGCCTAGTGGCTATATTGACTTAACTAG 16983 36 100.0 30 .................................... AAATTTTTGCAGGAAATTGCCGATGAGCTA 17049 36 100.0 30 .................................... GAAAACTTGAAGTCGCAACTCAATAGCGAG 17115 36 100.0 30 .................................... AAAAGTAGTCGATGAATATTTAAGGTTAGT 17181 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.9 30 GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Left flank : CACAGGATTATCTTAATTCTTATCAGAATAAGATTATTTCAAATCTGTTTGATACTTTAAATGAAAATCAGAGAAATAAAATATTTAATACGTGGCGTCAGCTGAGTACTGATATTCAAGATATAATATTTATGACTGATTTACCAATTGAAGTTGGTGAAAATCTAGATTTAAAGAAGCTATTCAAATTTGATGGAATTCATTTTGATGATTCTGTATTAAGTGATCCTTATGCTATAATTGAAACAGTTGTTAAAATTCATATTGAATGTAAATTGAATTCGGTTGTTACTTTTGCAAACGTAAGTCATTATCTTACAAAAGAACAATTGAATAACTTAATTACCTTTATAAACGAAGTAAATATGCCTTTGATATTAATAGAATTTTCATCTTCAGATTTTAAGGTTGTTAGTGGGGATGCAAGAGTCTGTTATATTGATGAGGATTTTGTCGACTGGTACTGATTTTAAATCTGAGAAGCTGATGATAAAATGTCG # Right flank : AGTAACAAAAACCAATTTAATTAATATGATCATATTTTAATTTGAGGAGAAAACTAAGTATGTGGACATTTCTTAAATTTTTTCAGACACCAGTAGGCTATTTAATTGGAATGGCTATTCTTGTCATATTGCAATACGTGTATGAATGGATAAGAGACGAGCGCTAAAATATTGTTTGGTTTATTGGCAATTAATATACTTTAGAAAGCTGCAAAACACTATAACTTATAGGAGATAAAAATGGAAGGTTTAGCATATGTTATTCTATTTATAGGAGCTTTTATATATTACTATTGTAAAAATAACCGTAAAAAATAATACGATTTTTAAAAGTTACTGAGGGGGCATAATATGGATGCAATTATTGATTTCTTTACTAACCCTATATGGATTACATTTATAACAATTTTATATTTTTCTATGGAGTTTATAGAAAATAAGCGAAAAAAATAGCGCTTTTTTATTGGTAAAGTAATAACAATTATGTCAGTTTTAAAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //