Array 1 83527-84653 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKHX01000005.1 Varibaculum cambriense strain UMB0796 ERR1203665.17957_1_77.5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 83527 29 100.0 32 ............................. CCATGATCAAAAACTCATGCCCACCCCAAGGA 83588 29 100.0 32 ............................. CTGCCACCCCTGAATTCCTAACGAAATTCCCG 83649 29 100.0 32 ............................. TATCCGGTGACGCCAAAGCACCAGGGCATCAT 83710 29 100.0 32 ............................. CACTCGACCGAGCGGATCACCTGGTTAACCCC 83771 29 100.0 32 ............................. CACTGACGGGCAGACATTTACGCGGCCTCCAA 83832 29 100.0 32 ............................. TTTTAACCCGGCATCCTGAGGTAGGCGGCGTC 83893 29 100.0 32 ............................. TCTTTAAAGAACCCCAGTCAGTAGGAGTGACG 83954 29 100.0 32 ............................. CTATTCCAAACCGGAGAAGATATTCATCTATA 84015 29 100.0 32 ............................. CTCATCCTCAGTACATAGAATAACCTCCCTAA 84076 29 100.0 32 ............................. CAACCGCCGATGCCGCGCTAATCCCCTGGACT 84137 29 100.0 32 ............................. TTCATTGCCCGGCTCGCGGATATTCTTACCCG 84198 29 100.0 32 ............................. CATCTTTTAGCATTTGGTCAGGTACCGGCCTA 84259 29 100.0 32 ............................. TGTCCCAACATCCCCGGGTGGTGAGGCGCCCG 84320 29 100.0 32 ............................. TAATCCTCTATCGCCCTACTAGCGGCTGAAAG 84381 29 100.0 32 ............................. TAGAGGAGGCAGTGGAATGTTGAGAAATAAAG 84442 29 100.0 32 ............................. TTGATGAGCGCGATTAGTGAATCTAGGGACAG 84503 29 100.0 32 ............................. TTGAAGAACGTTCCGGATGGAATACTCGTCAG 84564 29 100.0 32 ............................. CCGGCAGGCTAATCGCAACCGTGCGAATCGAA 84625 29 82.8 0 ........................CCATA | ========== ====== ====== ====== ============================= ================================ ================== 19 29 99.1 32 AAGTGCCCCGCACCTGCGGGGATGATCCG # Left flank : TGAGACGGGGGACGCTCCGTTTTGATGGTTTTAATCTTGACGGCCTGCCCGCCGGGACTGCGCGGATATATAACGCGTTGGCTTCTAGAGGCATCCCCGGGAGTTTTCGTGGGAAGATTGTCTGCCCGGGTAAGGGAGAATCTATGGGATTTGGTGGTCGCTGAGCGGAAACAGGGTAAGGCGCTGCTGATATACAGCACTAATAATGAGCAAGGCTATGCCGTGCGCTCGGCTGGGCATAAATGGAATCCAGTGGAACTAGAAGGGATGACTTTGCTGCAGCATCCCGAGCGGAGAAAATCTGATAACCCGGCAGGGGAGGGGAATGCGCGAGAGCCGGGAGCGTGGCAAGGGAAATCTAATGGTAATGAAGGGTATGGCTGGTCAATAGCTGCTAGGCGCCGGAAAATGCGTAGGCGTAAACCCTAATATTCTCGGTAAGTACCTATAGGATGGCTATAGCGGCGGATATTTTGGATCGATATCCCAGCTCATCGAGT # Right flank : AAATTTATTTCTATTCCCGGAGCGGCGAGATTGTTACTCACAAGCGAATTATGGTGTTATAATATAATCTTCGTTTGGGAAGGTTGTGTCCTATGACAGCAGGTACCAAGCTTTCCCCGATTACGCGCCTATAAACTAAAGCGAGCCAGGAACGCGTAAGCCATCTCGAGCAAGCGATAAATGACAGGAGTATCCAATGAGCAACGAAATCGGTCTGATAAAGATCTTAAAGTGGCCGTTCTTGGGGAACTGGCGGACGATTTCCGACATCAATCCTAAAACTGGTAGTCGGGACGAACTATATTTTCGCGTTCCACTTCCGGGCCTCTATCCCTCTGGCGAAAGAGTACACTTTGGTAATAGAGCTCGGGAAATAATATGGGTACCAATTTGGCAGTTTTTACTGCTTATTTTTTGTCAAACTACTGAAAAAATGGCTTCGGCGGGTTCCATCTTAGGAGTCTTTATCTGTGGAGCGATAACCCTCTACCTCACTTTAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAGTGCCCCGCACCTGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTGCCCCGCACGCGCGGGGATGATCCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //