Array 1 3728-8484 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXC010000129.1 Tychonema sp. LEGE 07199 NODE_218_length_18759_cov_15.2363, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 3728 37 100.0 32 ..................................... AATACTAGACAACCACTAGACACAATGCTAGG 3797 37 100.0 37 ..................................... AGCACTCTCAGAAGCCAGAAGAGTTTTGGGCGATTGC 3871 37 100.0 37 ..................................... GCTGTATAGGAAAAGATTTGAGTATCTTTTTTGCCTA 3945 37 100.0 38 ..................................... TTAAAGGGCAGCTCAATCCATCTGTAATTACTCAAAAA 4020 37 100.0 38 ..................................... TCCGCGACCGGACACTTACTGTCAGGGAATACCCTGAA 4095 37 100.0 41 ..................................... TTAACTATGCTCTAACAACAGCAACCTGAGAAAATCCTTTA 4173 37 100.0 42 ..................................... TTGGCTTGGAAAATTACTAAGATGTTGATTGGAATCTTAGGG 4252 37 100.0 36 ..................................... CCGTAATCGTAAACGAAGGGCAAGCAGAATCAGCGA 4325 37 100.0 44 ..................................... GGGAATAGATAATAAATATTCGATATCAGCAGGAATGAAAATGA 4406 37 100.0 36 ..................................... CGCCAGGCCACTGAGGTATGGTTGCCGGCAACCATA 4479 37 100.0 37 ..................................... TAGAGTGTCCTCACGCCACCTTATCAATAGACAAAGA 4553 37 100.0 36 ..................................... CCGGCGATCGGAGTGGGAGAAACAGTCGGCACTTGG 4626 37 100.0 39 ..................................... TTGGGTTTAGTGCTGATTTGGTTGGAAAACACGTATCAA 4702 37 100.0 37 ..................................... TTCGTCGATCGTCACGAATTCCACCTCAGTTCCACCA 4776 37 100.0 36 ..................................... CGATACTTACACGTTCGCGACGATGCGGAAGCTCTG 4849 37 100.0 37 ..................................... CAGTAAGGTTGTTATCGGACATTTAATCAAAAAACTA 4923 37 100.0 37 ..................................... GAGAAAAATCAGACGTTCAACTTTTACCCAATCGTGA 4997 37 100.0 38 ..................................... CTACCAATGTACTTCTTACCACTAATAGTATTTTCTGC 5072 37 100.0 38 ..................................... TTTTTGAACAAATTTAAGAGCTTTCATCTTCTCAAAAC 5147 37 100.0 34 ..................................... GCAGTGGATAAAAGTATCTACTTCTTTCATCTTG 5218 37 100.0 34 ..................................... AACAAATTGATTAGTTTTCCTAGGTTAACTTCGG 5289 37 100.0 41 ..................................... TGGAAAATCCAATCTTACATAATCTGGAGAGTGCTTTCTTG 5367 37 100.0 34 ..................................... GTATTGACAGAAATCGCTTTCATGTGTTTTCCTA 5438 37 100.0 35 ..................................... AATAGTTCATTAGCCATTGTGAGTAAGTCCTGAGA 5510 37 100.0 33 ..................................... TTAATTCTGGGTCAGAGATAGATTCTAAATTTT 5580 37 100.0 33 ..................................... ATATTAGTGATATTGCTAAATAGAAGGTAGATT 5650 37 100.0 40 ..................................... TACGTTCCAGGCTCTCAACATCGTTTCAAACAAGCTCAAA 5727 37 100.0 35 ..................................... CTCGAAAGTAATAGGAAGAGATTCCCATAGATTAT 5799 37 100.0 39 ..................................... TAATCCTCCTAAAGCAGGAAATCTCAAAACTAGAGGAAG 5875 37 100.0 36 ..................................... GTTTATGACTGATTTACCTCACCTGTTTTTTGAACT 5948 37 100.0 41 ..................................... TCTTTGCTTAATAATTGCTCTTCTGTGGTTACAGGGAAAGC 6026 37 100.0 35 ..................................... AAAATTAAATTTCAGATTGGGCAAGTTCGCGTACC 6098 37 100.0 40 ..................................... CACCTGGCAGGGCTAGCGGCGCTGCGAGCAATTCTGTAAG 6175 37 100.0 38 ..................................... ACAGCCGCTCTTTACTCCTTACCATTACCGCAGACCCA 6250 37 100.0 36 ..................................... TCCGCGGCGGGCGCTAAAACTTTTGTTTCATACCAA 6323 37 100.0 37 ..................................... TAGAGCGGACGATCGCTCCCGCGGGTTCTGGCCGCAA 6397 37 100.0 33 ..................................... CCTACAATCACCCTCACCAACTGATCCAACTGA 6467 37 100.0 36 ..................................... AAGAGAGCAATCGTATACCTGCATCATCTTCTTCAG 6540 37 100.0 39 ..................................... CCCTCTTGTCGAGCTGGGGGTAGAGGCGCTCCCGTTTCA 6616 37 100.0 36 ..................................... GTTGAACATTGGCAGCTAAAAAAAGAGGCCCTAAGA 6689 37 100.0 33 ..................................... CAAACGCATCCAGTGTCGTTTGCACTATCAAAT 6759 37 100.0 41 ..................................... GGCGCAAGCCCCGCCAGTCCAACCTGACGGGAACGCCTAGA 6837 37 100.0 33 ..................................... TCCGAGGGCTGCACGTCGATCGCGGTTGTCTCC 6907 37 100.0 36 ..................................... CGCGCTGTGTCGGCTGCTGGCGGTATTTGGGTTTCG 6980 37 100.0 30 ..................................... GTGACAGTAATCGTTGCCACGCCGACACCA 7047 37 100.0 39 ..................................... CAGCAAATTTTCGAGAATTTAGCAGCTTGATAGCATCTA 7123 37 100.0 33 ..................................... TAACATATTTTCAATTATTGCCTTTTTTTTAGA 7193 37 100.0 35 ..................................... TAAAGTCATAGGCTTTTCCCCTATTTCCTCACCCT 7265 37 100.0 35 ..................................... GACCGCGATACAACCGTGTTAGAATATTAGAGCCA 7337 37 100.0 35 ..................................... ATTAATTCAGATACATTAATGGAAATTCCATATCT 7409 37 100.0 36 ..................................... GGGTAGTGGCAGTGATGGAAAAGTAAGATTGACTGC 7482 37 100.0 35 ..................................... TCTGACGAGACAATATCAGAGAACAAAGCTTTAAC 7554 37 100.0 34 ..................................... CTGGAAGCGAGACCATAAATTCCACAACCAAACC 7625 37 100.0 36 ..................................... GCAAAAAACCCAGAGCGATCACGCCAACCAAAAGAG 7698 37 100.0 35 ..................................... TGAAGTGATGGAACTTTCCCAGGAGCGCAAAAAAA 7770 37 100.0 40 ..................................... CAGAAACTTCAACGCCAGGAGACACCCAAGATATCAATGA 7847 37 100.0 33 ..................................... GCTACTAAGTCCCTTTCTACCTCATAAACAGGG 7917 37 100.0 37 ..................................... CTCAGTGCGGTTAATGTATGTGCGATCGGTTTGCCAA 7991 37 100.0 41 ..................................... GGGGTACAAATGCCAGAGGGCAAACTACCTGCCGCCCAAAA 8069 37 100.0 40 ..................................... GGCTTGCAATTAATCATGCAATGAGATATTGCAAGCGATT 8146 37 100.0 38 ..................................... CCAATAAAAAGGAAGGGGCCAAGCTGCAGCCGTATTCT 8221 37 100.0 38 ..................................... CGGTCTGACACCGACAGCAGTGAAGATGCTAGACGAAT 8296 37 100.0 38 ..................................... GGGGCCAAAGCAATTCCTAATATACTCCCAATCGAGCT 8371 37 100.0 40 ..................................... CAGGATGAGGTATACAGGCATATAGGCGGGGAGGTAGAAG 8448 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================ ================== 65 37 100.0 37 GCCGCAATAAACTCCACTCCCTTCTAGGGATTGAAAC # Left flank : GGAAGACAAGCGGCGGACTAAAGTTCACAAAATTCTCAAATCCTACGGGCAGTGGATGCAGTACAGTGTGTTTGAGTGTGCGGATTTGAGCGAAACGCAGTATGCTAAGTTGCGATCGCGCTTGGCTAAATTCATCAAGCCTCCAGAGGACAGTATCCTATTTTTTCCGTTGTGCGCTTGCTGTCAGGGTAAAATTGAGCGCATTGGTGGGGTAGTTCCGATCGATCGAACTATTTTCTTTGCGTAAAAATTCGCCAACCTGTAGGTGTAAAATTTGGGGGGTCAAATTTTTAGGCTATAATCTATATAGAGTAAGGGTTTGATGCTCCCTCTCCGAAAATGAGGTTGGCGAAATCGCTAGGACTGTTGCTACATAAGGATTTTAGGTTAAAGTGCGAGCTATGGTATTGACAGAACGGGGACTGAAATGGTATTTTGGGATGAGGTTGGCGAAACTGAACCTTGAAAACCAAATAGAGCAATGGTTTCACACACCGGCG # Right flank : CTGCCAAACTATAAAATTATTGGCTCAAAAATAGATTGATCCTCACCCTGTTTATCCCCTCCAATAACCTCAAACAATCGATCGACTCCACAGCGCCAAGAAAAATGTTCAGCCACAAAACCAGGCCCAGCAACCCTAGCTTTGGCAGCTATTCCAGGCTGTTCGATCGCCCCCAGCATCAAATCAGTCAAATGTTCCCACTCAGGAGCTAACATAAATAAGGTTTCCCCATCAACAACCACAGCCGTAAATTTACTCTCTATCCGCAGCGCAAAATCCGATCGCGTAAAATCATCCGTAGGGCCGCCCTCCGTGCAGATTACCAGCAAACCGCAAGCCGCAGCCTCCAACACCGGCAGATTAAAACCTTCCGCCAAATAGGGAGAAACATAAACATCCGCAGCTTGGTACAACTCAGCTATTTCAGCAAAAGATAGCTGCGTCCCAGTATAAATCAACCTCGGTAAAACCCTCGCTCTTTCCGCATCGTCGAGTACCAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCAATAAACTCCACTCCCTTCTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 1 18804-23458 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXC010000017.1 Tychonema sp. LEGE 07199 NODE_29_length_58608_cov_15.9067, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 18804 37 100.0 33 ..................................... CCTGTGCTTTTTTATCAGAGTGTTGCGACCTAT 18874 37 100.0 35 ..................................... ATCACTAATTAGCTTGTTTGAACAAGCGAACAAAT 18946 37 100.0 37 ..................................... ATAATGACCGTGAATACCTGCAATCACGACTACCTAT 19020 37 100.0 34 ..................................... CATTGGCCCCCTTAGTTGCCCTGTTGAATAGTAG 19091 37 100.0 32 ..................................... TTTAACACCGTGCATCTCTCCCTCTATCGCTT 19160 37 100.0 35 ..................................... GCGAACATTTTAGTGCGATAACAGCCACAAGAAAT 19232 37 100.0 35 ..................................... GGGTGATCGCCAGCTCGGACGAGTTTATAGATAAA 19304 37 100.0 40 ..................................... AAGAAGTTGAAGCGCGACGCACCTGCGACGACTTTTACGA 19381 37 100.0 42 ..................................... AAAATTATTGCCACAGAAGCGAGGAAAGGAAAAGGATACAGG 19460 37 100.0 38 ..................................... AACAATTAGATTTTGAAGAGATGTCGCATCGTCTTTTG 19535 37 100.0 42 ..................................... TTGCGGCTACAAGATACTGAAGATAGAGCATTGATTGTCGGT 19614 37 100.0 35 ..................................... CAAGAGTGCGCCATTTCAATAAGAAATCGAAACAA 19686 37 100.0 37 ..................................... AAGTCGGGGTGTCGCTCTGTCAAACCTCAGAGCTCGA 19760 37 100.0 35 ..................................... TCCACCAACACCCGCAATCTTTAAGCCAAAATCTA 19832 37 100.0 32 ..................................... TAAAATGTGAACTCTGAATCTCTTATTTTCAC 19901 37 100.0 37 ..................................... AACCCAGACTTTAAACATTATCAGCAATTTACCCGCT 19975 37 100.0 36 ..................................... TTCTACTGAGACAGCTAGCTTAGTACAAGAGCAAGA 20048 37 100.0 37 ..................................... GATTTTGCAGCACATCATTTTTACTTTGTCGATAAAA 20122 37 100.0 39 ..................................... TTGTAAAGAATTGCGATCGACCTAAAACAACGATCGCAA 20198 37 100.0 40 ..................................... TAAGCAGCCTAGATCCGAGGGGATGAGAGGGATTAGCAAC 20275 37 100.0 37 ..................................... GGCTATTGACATTTATCAGCAAAATAATGAATAATCA 20349 37 100.0 36 ..................................... AGAGTATTTTGATAAGTGGATAGTAAGTATTAATTA 20422 37 100.0 35 ..................................... TTGCAATCGTTGACCGTTACAGGTCTTTCACATTC 20494 37 100.0 37 ..................................... GGATAGTCAGCAGGGTAGTTGCATTTATTTTAAAAAT 20568 37 100.0 35 ..................................... CTGAACCCTACAGCTATCCCAGAAAGTTTGTACAG 20640 37 100.0 39 ..................................... CTTTAAATAAATATATAAAATACACTATTCATTCTAAGC 20716 37 100.0 34 ..................................... CAATCTCATACTTGATGGCTATGAACCATTTGTC 20787 37 100.0 33 ..................................... CTTACCTTTCCTCATATGACTAAGCTCAGAAGC 20857 37 100.0 35 ..................................... GCGAATCCTAACCGCTGTCTTTCTGACTCAATCCA 20929 37 100.0 33 ..................................... GGGTCTTACGGCGGCAGAAGCCGATGCGACCAC 20999 37 100.0 38 ..................................... TCCATTACTAGCTCCGTCACCTTCTCAGTCAGTACAAA 21074 37 100.0 39 ..................................... GTGGCAAAAGCTGGACGGCTCGACTGCTAGCCAAGCGAA 21150 37 100.0 33 ..................................... CAAAAGTGCGATCGCCTTTATCTACAGGCAACA 21220 37 100.0 35 ..................................... TTCGCGACAAGCTGTACCACCTGAACTAAAAGAGC 21292 37 100.0 35 ..................................... CGGATTGAGCCGAGGGAATATTGAGGTAAAATCTC 21364 37 100.0 36 ..................................... AGCACTAGGGCGTGACAGTAAAATGTCCAGTATCCG 21437 37 100.0 33 ..................................... TCTCTGATTTTATTTTAATGACATGACAATTAC 21507 37 100.0 41 ..................................... GCGATGTGCGAATCATGCTTGGCGCTAGCGATGATGGCTTG 21585 37 100.0 46 ..................................... TCAGCTTTCCAAGCTAGTTTCTGAGCCTCAGTTTTTGCCGTACCGC 21668 37 100.0 36 ..................................... TGACATTAGCGGCCGCTTGTCGTTGCGGGCCTCGCC 21741 37 100.0 34 ..................................... AATCATTACAGATGCGGGAGATACCACAATGATT 21812 37 100.0 34 ..................................... CTTTGGGCGGGGAATTGGCACTGGAATAAATTGA 21883 37 100.0 39 ..................................... TTCATAGATTTTATTCCACATGACCCTTTGGGAGTTAAC 21959 37 100.0 34 ..................................... TTTGGGTTTTGGGCGATCCTTTCTGCTCTGTAGC 22030 37 100.0 40 ..................................... ATCAGTTTGACTTCATTGGGATAGAGAAAATTCCATTGAT 22107 37 100.0 37 ..................................... GAGGAGCATATTAACAATAGCTCATAATGTACTGTTG 22181 37 100.0 42 ..................................... GGGTTTTGTCGAGTTTGTCTGAGTTTTCAAAAACTCATGATT 22260 37 100.0 37 ..................................... CGGTCGCCTGATGGTGAGTTGATGTGTCACCCGCATT 22334 37 100.0 42 ..................................... TAGCTCCCTGGGCTGCCCGCACCACGCTTTCTTGGCTCTCTT 22413 37 100.0 34 ..................................... CCATAAAATATTCCTTAGATTGCCGATCGCACTT 22484 37 100.0 32 ..................................... GGCGATTAACTGGATGTCTCTGTGGTTATTTT 22553 37 100.0 37 ..................................... CGGTTGGCGATCACGTTTGACATCGGATCGAGGTCAA 22627 37 100.0 35 ..................................... AATCCGATGGGCTCGAACGGTGCGGTTGGCGATCA 22699 37 100.0 38 ..................................... TTGATGCTCCCCAAAATTGTTGAAGTGTATCAGTGTAC 22774 37 100.0 36 ..................................... AAAACTCTCAAACTTAGACACCCTGAAGTTTTGAGT 22847 37 100.0 35 ..................................... TTTCCCTGGAATTGGCGGCACACCTGTTAGATCGC 22919 37 100.0 31 ..................................... GATTGTAGTGTGGGCCATCCCTCCCCCTAGC 22987 37 100.0 42 ..................................... CCTAAGTCACCCTTAGCCCTGTCTTACCGGGGAGGCCGCAAT 23066 37 100.0 35 ..................................... TCTAAGCCATTAGGCAATGAGTGGAAATCAGTAAA 23138 37 100.0 33 ..................................... TCACCCTTGACAAAATCTTGGTGAAGCTCCAAA 23208 37 100.0 34 ..................................... GAAGTAGCAATATAAAAAGGCAACAACATATTTA 23279 37 97.3 35 ........C............................ CTGACCTGGGTCAATGGTAATCTGCGGACTTACAC 23351 37 97.3 34 ........C............................ AGGTTGGTTGAAAAAGGCTTGATATCGCTGCAAC 23422 37 97.3 0 ........C............................ | ========== ====== ====== ====== ===================================== ============================================== ================== 64 37 99.9 36 GCCGCAATAAACTCCACTCCCTTCTAGGGATTGAAAC # Left flank : AGTGCCGTCAAAGTCGAAAATAATTAACTTGTACTGATTCATTTTCGTCAAAAAATCCTATAATTAGAATATGTGCGAATAAATCTTACCTAGGAAGGCGAGTTTTGCCGCAGTCCTAAACTCCCTTTTATTAAAGTTTACAGCCTAAACCAGCCCTTTGTTTTTTCCCTTGTGTGCTTGCTGTCAGGGTAAAATTGAGGGTATTGGCGGGGTAGTCCGGGGCGATCGAACTATTTTCTTTGCGTAAAAATTCGCCAACCTGTAGGTGTAAAATTTGGGGGGTCAAATTTTTAGGCTATAATCTATATAGAGTAAGGGTTTGATGCTCCCTCTCCGAAAATGAGGTTGGCGAAATCGCTAGGACTGTTGCTACATAAGGATTTTAGGTTAAAGTGCGAGCTATGGTATTGACAGAACGGGGACTGAAATGGTATTTTGGGATGAGGTTGGCGAAACTGAACCTTGAAAACCAAATAGAGCAATGGTTTCACACACCGGCG # Right flank : CTTAGAGCTTCCTATGCCCAAATACTCGCCCAAAACGATCGCTCTCGTAAAAAACCGGGTTTCTTGATTGAGAGTGTATAAGTCCGACTGCTGCAAAAAGCCCGATCGACCACCAGCCTCACAAACAAGATAAACATCCGCTATAATCCAGAGTTTGCGTGTATTAATTGGTTAAGAGTAAAGTATTGCATCACTTTTGTGTAAAGTCCTATGGCACTAATTGTTCAGAAATACGGCGGAACATCGGTTGGTACAGTCGATCGCATTTTGGAAGTAGCGCGACGAGCAGTCAAAACAGTAAAGCTGGGAAACTCCCTAGTTGTCGTACTTTCGGCGATGGGAAAAACGACTGACGGTTTAGTGAAACTGGCTAAGGAAATTTCCGCAAATCCCAGCAAGCGGGAAATGGATATGTTGCTCTCCACCGGGGAACAAGTCTCGATCGCGCTTTTGAGCATGGCACTGCAAGAAATGGGACAGCCCGCAATTTCCTTTACAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCAATAAACTCCACTCCCTTCTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 57596-57181 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXC010000011.1 Tychonema sp. LEGE 07199 NODE_16_length_69101_cov_16.7772, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================================== ================================================= ================== 57595 43 100.0 32 ........................................... TTCTTCCGACGGACTTACATCCGTTACATCCG 57520 43 100.0 23 ........................................... CTCTTCCGACGGACTTACATCTG 57454 43 100.0 49 ........................................... TTCTCCCCTCTTCCTTCTTCCCTCGAACCTCGAACCTCTTCCGACGGAC 57362 43 100.0 30 ........................................... CTCGAACCTCTTCCGACGGACTTACATCCG 57289 43 100.0 23 ........................................... TTCTTCCGACGGACTTACATCCG 57223 43 97.7 0 ........................................C.. | ========== ====== ====== ====== =========================================== ================================================= ================== 6 43 99.6 32 TTACATCCGTTACATCCCGTACATTGCTCGTTGCCGAACTTCC # Left flank : AGCAAATCCACCCGTTGCACGCTTGACGGCTACTTTAGTTTTTAATTGCACTGATTTTTTTACCTCCAACTAACTATGAATTTTAATGAAAGCTTTGATACTACTTTAATCTCTACGATCGAACTCTGGTAGTTCACCGGCGGATATTTTACAAAAAGTTTCGCGCTGGGGCGGTGTGCGATCGTCCGATCGCAAAATTGTGGAACAGCAGAGGCAGAAAAGAAATAGAAGAAATCGCGGTTTCTATGCCGGTTTACCGCGATCTGACGCTATAGGGCATTGGGCATTGGGCCGAAGGGCTCTAGCGTTGCGGAGGGATGGGGCATTGGGCATTGGGCATTGGGCATTGGGCCGAAGGGCTCTAGCGTTGCGGAGGGATTGGGCATACCTCACCACGCGATCGAACCGCTATATGTTAGAGATCGATCGCCAAAAGAAAGCCATCTTCCTTCTTCCTTCTCCCCTCTTCCATCTTCCTTCTTCCGACGGACTTACATCCG # Right flank : CTCGGACTTCTTGCCAAAGTTCACAGAGCATCCTTTAAGACTTTGCGAGTGTGGTGCCAAGCTACCATGCCCATCACCGAGACCAAAAAGCCCAAACTCAGCAGCACGATCCGCAAACCCAAGTCATCCGATCCCACTACTTTGCTCACAGCATCCGTCAGCGGGCCGGTCACTGCTAAAGGCAAGCTGAGGGCAATGTTAATCGCATTGTTCTCCAAGCCAAAGACTTTTCCGCGCATAGATTCTGGAGTTTTCTCTTGAATCAAAGCTTGCATCGGGCCGTTAATTAAAGAAGCGCCAAAACCGAACAGAGCACTCAAACTAAATCCCAGCCACAACTGTCTGTTAAAGGCAAACATTGCCAACACAAAACCCATCATCAAGAAGCCAAGTAAGGGCAAAGGTTTGTGCTGCATTCGATCGCCCCAGTGACCCAAAAAAGCTGCGCCGAAGACCATTCCGACACCAGCCGCCGCCAGCAAAAAGCCGAATTGAGTTTC # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.27, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTACATCCGTTACATCCCGTACATTGCTCGTTGCCGAACTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 22636-22459 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXC010000105.1 Tychonema sp. LEGE 07199 NODE_181_length_22678_cov_16.5978, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================= ================== 22635 30 96.7 42 ..T........................... GGGGGCTGGGGGGGTGCTTTCTCAACAAGTAGGAGAAGAATT 22563 30 100.0 45 .............................. AGAAGAAGGGGATACTCTTCCTCCATCATTCCCAACCCAAAATAC 22488 30 96.7 0 .......A...................... | ========== ====== ====== ====== ============================== ============================================= ================== 3 30 97.8 44 AGAAGAACCTCTTGCTCCCCCCTTAGCAAG # Left flank : TGGTAAGGGGGGGGACAAGAGTGGAAGAAGAGGTGACAGGAG # Right flank : GGGGGCTGGGGGGGTGCTTTCTCAACAGCTACGGGAAGCATTAGCAGCATCGGGAAAAGAGCGAATTCGAGACTTAGTAAAAAATCCCCTGAGATGTTCGCTGCTGTGCGGCACTTGGCAATCCTTAGATGGGGATTTGCCGGATACTAAGGCTAAGCTTTATCAGCGATTTGTGACTACTTTGTATCAGTGGAAAAAACCGCACTTGAATTGGAGTCAGCAGCAGGATTTGAATGCGGCTTTGGGGAAATTGGCACTGGCTGGGATGTTAAATGAAACGGAGCGCTTTCAGTTGCGAGAAAGTGTGGGATATCGGGTGATGGGTGCATCGCAGTTTGAGTTGGCTTGTCGTTTGGGTTGGCTGAATTTAGTGGCGAGGGATGCGGAGACGCTGGAGGGGATTTATGCTTTTTACCATCCGACTTTTCAGGAATATTTTGCGGCGTTGGCGGTTGAGGATTGGCACTTTTTCTTGAATCATACCCCCCCAACCCCCCCTT # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGAAGAACCTCTTGCTCCCCCCTTAGCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [41.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //