Array 1 44421-47750 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJBU01000017.1 Legionella pneumophila strain 2531STDY5467289, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 44421 28 100.0 34 ............................ ACAATGCCGACAAGGGATATGATTAGGACTGCTG 44483 28 100.0 32 ............................ TGTCCGCCGTGTCGCCGCCGCCGGAACCTAAC 44543 28 100.0 32 ............................ GCTTTACTTCTTAAAAAAGACTGGACTACGCT 44603 28 100.0 32 ............................ TCTTTCTTTGCTGCTAGTGCGTCAATAGATTT 44663 28 100.0 32 ............................ AAGGAATGATGAGAATTAGTGTTGCTGAGTGG 44723 28 100.0 32 ............................ ATAGAGACAAGAAACTTCAATCATTGCTTTAT 44783 28 100.0 32 ............................ AGAAGAATTAAAAAACGCTCTTATGCAATGTG 44843 28 100.0 32 ............................ TTGAGAGTAGCAACAGATTTAACCAAGGGTGA 44903 28 100.0 32 ............................ TTCCGCAACCGAGATCATAAACTTGGCTACGT 44963 28 100.0 32 ............................ ATTACTTGTTGTACTACTAATTACTGTATCCC 45023 28 100.0 32 ............................ TACCAGCGAACGAGCCGCCGAATGGAACGGTC 45083 28 100.0 32 ............................ TATCAGACTTAAACGAATCTCACTATAAAACA 45143 28 100.0 32 ............................ GGCGTATAATTATCTCGTATGTATTGCTCTAA 45203 28 100.0 32 ............................ AAAATTGTTTTTCTGCTCAAGAGATGGGGAAC 45263 28 100.0 32 ............................ TATGATGACGGCCTCCACGGAGAACTTGTTAT 45323 28 100.0 32 ............................ ATCACGAATGCACCCAAATTGCCTGTTAGTTA 45383 28 100.0 32 ............................ ATGTAGCGAAGGCGAGGTTCCATAATGTATAA 45443 28 100.0 32 ............................ CACTCGATGGGGTTTTCGGAGAATCATTCAGC 45503 28 100.0 32 ............................ ATTACCATTTTTTTAATCTGCTCAGATAATGG 45563 28 100.0 32 ............................ TTCCAGCTCTAATATTTTACACGCATCATATT 45623 28 100.0 32 ............................ CTGCGGGCTTGGAAATGATGAAGGCTGTTAAT 45683 28 100.0 32 ............................ TGTCTGCCGTGTCGCCGCCGCCAGAACCTAAC 45743 28 100.0 32 ............................ AATTGAACAGATAGTTGAAGAATCAGTAAAAG 45803 28 100.0 32 ............................ TTCTTAGTCCCTTTACACGCTGGGCATCTAAT 45863 28 100.0 32 ............................ TTGAGAGTTGCTCTTATGGCCTCTTTTGTAGA 45923 28 100.0 32 ............................ TAATTCATGAACGATAGGGTAGGTACTAGCAT 45983 28 100.0 32 ............................ TCATTTTGAACTGTAAATAAACCTTTCGTTAA 46043 28 100.0 32 ............................ ACTGTGGTGAGTATGGTGAGAAGTACGGAAGA 46103 28 100.0 32 ............................ ATGTGCACCTACACCGTGAATGTGCCGGTATT 46163 28 100.0 32 ............................ TCTGAGCTTGAGCAGCTTGAAAAACAAATACA 46223 28 100.0 32 ............................ AAAACGTGCTCCACCATTTAGTTGACGGGTCA 46283 28 100.0 32 ............................ GCTTGTGCCATGCGCTTAACTATTGCCCTTTC 46343 28 100.0 32 ............................ GATATGTGAAGAAGCAAAGCAAGTAATTGCTA 46403 28 100.0 32 ............................ TACTAGCCCTTAGCTATGACGAGCTCGACCAG 46463 28 100.0 32 ............................ GATTGAGATTTCAGTCGAATATATTTTACCTG 46523 28 100.0 32 ............................ TGCCCTGAACTTAGATTAATAATTACTCCATG 46583 28 100.0 32 ............................ GCTTGCACTTAGTAGGTAACGCTATCGTCAAT 46643 28 100.0 32 ............................ TATAAAATTTAATTCAGCGTCATATACCGGCG 46703 28 100.0 32 ............................ TCAGCAGCAAGACCCGGGGTCTGCAACTCAAG 46763 28 100.0 32 ............................ AAAGCCGCCGACATACGCCCTAAACTTGGTGT 46823 28 100.0 32 ............................ TATCTATTTAGATATAGCCTTCTTTCTGTAGA 46883 28 100.0 32 ............................ AGCAGTTCCAGCAGCATTTGATGGCTTATAAG 46943 28 100.0 32 ............................ ACAAGAGGCGCAACTAAACCTAACACAAATGT 47003 28 100.0 32 ............................ GGAATTTGTCGGCCGCATAGACCGCTTTTATC 47063 28 96.4 32 ...............A............ TTAACAGTTAATCTTTCAACATCAGATAAACT 47123 28 100.0 32 ............................ TTACCTCATGACTTGCTTTCTAACCTTTGCGC 47183 28 100.0 32 ............................ TGTCCGCCGTGTCACCGCCTCCGGAACCTAAC 47243 28 100.0 32 ............................ CAATTCGAACAAAACATAATCCTCAGGATTCT 47303 28 100.0 32 ............................ TGCTGGATTGTGCCCCAAAGCAAACAGAGACA 47363 28 100.0 32 ............................ AATACGTGGTTATGACCTCATCTAAAGACGTA 47423 28 100.0 32 ............................ ACATGAAGATAAAAAAACGGGCAAAAAGACCT 47483 28 100.0 32 ............................ AAATGCCGACAACGGCGCTTAAAAGGTCTTCT 47543 28 100.0 32 ............................ AGTGAAGCTATTTTTAACTGGGATAACATGAT 47603 28 100.0 32 ............................ TTTTGCCGCTCTTTGAGAGATATTGCTGTTAA 47663 28 100.0 32 ............................ GCGATATTTTTAATCAAGAATTCGAAACATAT 47723 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================== ================== 56 28 99.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTATAACTATTTTTTTAAGATTTAGAGCAGA # Right flank : GTTATTATGTTAAAGGTGTTAGCACGCTACGCAGCAAGGTCGGACCAAGGCCTGACCTTGTTTTGATTAGGAAAGTCTAATCATGACTATAATCTCCATTTCTCTTTATGGAGTACAGCAACCGTTAGTCAAATCTATAAATAACCTAAACAAATAAAAATAAACTCTCTAGTTCCATGGAAATGAGTGTAATTGGATCGAAGTCAAAATAAATTGTGAAGTCTGATTACTGAGAAAATTAAATTTAGTTGATGAGTATCTATTGAATCATGAGAATAATCTAATGGTGTACGTTAATTATACACGTATGCTAAAAATTACTACCTGATGAGCTAGGATATTCTCTACCGCGTTGTTTGAATCACACTGAGTCAATCGTAAATTTATTTAGCATTACTGAGAATTATTTAATCCTCAAAAACTCAATAATAAATTTAGATATTTCACAAAATCATACGGTGAATGCTCTCCTGGTTTCGTCAGTTACTGAAATAGTGGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //