Array 1 471512-465330 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFPC010000001.1 Bifidobacterium asteroides strain W8130 NODE_1_length_1419951_cov_330.118480, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================== ================== 471511 29 96.6 32 ............................T TACTATAATCAGTTTTCTAATTTTCTTATTCA 471450 29 100.0 32 ............................. GACTGACCGACAGCGTGGGGAACCTCGTATCC 471389 29 100.0 32 ............................. AGGCCAAGCTCCATGGACTTCTGCGTCGGCAT 471328 29 96.6 32 ............................T CCTTGATAATATCATCGGATTTTCCATTAATC 471267 29 96.6 32 ............................T CTTGGTGATCGAAAAGCTGGCTCCCGAGTCTC 471206 29 96.6 32 ............................G AATGAGAATGAGAACACGGCTGACTACTGTCT 471145 29 96.6 32 ............................T TAGTCTTAATAAGGCCATGAAAAATATTAGAA 471084 29 96.6 32 ............................T ATGTTTGGATGGTCGAGTTTGATTACGAAACA 471023 29 96.6 32 ............................G TACGGCAAAGCAGCCGGCTGGGGCAACGTTCA 470962 29 100.0 32 ............................. ATTGCGGAAGGCTATCTGGACGGTCTTCTCAA 470901 29 100.0 32 ............................. CATCCCGAGATGGTGCCTGTCCTGACCCGCCA 470840 29 100.0 32 ............................. CCTTTGCCTTGTACCCCCGGAGAGAGTCGAAC 470779 29 100.0 32 ............................. TCCTGCATGCTGGTCTTCGCCTCGCCGGAGGC 470718 29 100.0 32 ............................. ATCAAAATTCGAACTAATAGTAAATTCATTAT 470657 29 96.6 32 ............................T CTGAACGTGTAATAGGTCATATGGTGGCGCTT 470596 29 96.6 32 ............................T CAGCAAACCTACAGGTGATACCCATGTACACT 470535 29 100.0 32 ............................. GTGACCGAGTGGGCACCCGACAGCCCGGAGCC 470474 29 96.6 32 ............................G TCTTCGGCGGCGTTGGCGCTGGTTTTCATCCA 470413 29 96.6 32 ............................T CTGGTGACCGGAAAGGATGAAGACGATGAATA 470352 29 100.0 32 ............................. CGTCGGCTTAAAAAAGAGCTCACCAACTCGGC 470291 29 96.6 32 ............................T TCAAGCGCACGGCACAAAGTTACGGCAAGACC 470230 29 96.6 32 ............................T GTGTAGTATCCCTAAAACATGTGTAAGCTATG 470169 29 100.0 32 ............................. AGGGCAAACGAAATATTAGGAGAAAACACCAT 470108 29 96.6 32 ............................T CTGCAGAATTTCGCTAAGCTTCTGCTGACTGG 470047 29 100.0 32 ............................. ACACCGCCGCCCCAAAGGCAGCGGAGGGATCA 469986 29 96.6 32 ............................T TTTGCGAGCTGCGTGTCAAAATACTTGGCCGG 469925 29 100.0 32 ............................. GGGTCCAGACCCGTGCGCTGCACCTCATGGAA 469864 29 100.0 32 ............................. TGGGACTTGACCTCACTGGCGATCTCGTAGAT 469803 29 96.6 32 ............................T CTGGGGAACGGCCGATCAAATGCGAAGCGATT 469742 29 100.0 32 ............................. CGTCCATGGATATCGTGGATACGACCTGTACC 469681 29 100.0 32 ............................. ATGGGGGTCAACTGGGCGGCCAACAACCAGCG 469620 29 96.6 32 ............................T CGCAGAACTCACGAGAGGAAATCGAACAGATG 469559 29 100.0 32 ............................. TACGCGCTGCACCGGTACGGGAGCCTGGCGGC 469498 29 96.6 32 ............................G TATTAGTAAGACAATCGACGCTCTTTTTGACC 469437 29 96.6 32 ............................T TACACGTATCGTGAGATGGGTTCGCGTGAATG 469376 29 96.6 32 ............................T CGTCGGCGGCCTTCCATATGTTCCGTCCTTCG 469315 29 100.0 32 ............................. AGCGAGTATCGACGTGCATAGGTGATGGCCGA 469254 29 96.6 32 ............................T GGCAAGATCAACAACTACTATAATCCAACAAA 469193 29 96.6 32 ............................T CATTACGAAAATTCTGCATGGCGTATGACCCG 469132 29 96.6 32 ............................T GCGCCTATCGTCCCTCCAACATTGCCGCTGTA 469071 29 100.0 32 ............................. GTTCGTGAATCTCTTGAAAATATGATGAATTT 469010 29 100.0 32 ............................. CAGCACCGAAGGCACTGCGAATTCGACCTTCT 468949 29 96.6 32 .............G............... CCAGAACCAAACCCTCTTGTAGAGCGGCTTTT 468888 29 100.0 32 ............................. CGATACATGGCATCCAGCTCACGGCTGTTCAT 468827 29 100.0 32 ............................. ATCACGCCAGGCTTACCGTATATGGCTTTATT 468766 29 96.6 32 ............................T GACTTTCCCATTGAGTCCTGGAGCGGTCGGGA 468705 29 100.0 32 ............................. CAATGGCGGCACCGTCACGATCCATCTGTATG 468644 29 96.6 82 ............................G GCATCCGATCCTGGATTGTCGTCCAGCCACCATTGCTCGTCCCGGTGCGCCTTGCCGTCCGACCACCAGCTGCCCGGATCGG 468533 29 96.6 32 ............................T CGGTATCGCCACGAATTCCTTGATACCGTTGT 468472 29 96.6 32 ............................T CGGAATGGCAGTGTATTCCTTGATGCCATCAT 468411 29 96.6 32 ............................T GACTATTCCTTTCAATAAAGCCGCCGGCCGAA 468350 29 96.6 32 ............................T ATCTGTGCAGACCCAGGATGAACCCGACGAGA 468289 29 100.0 32 ............................. GCGCAGGCGGCCCGCGACTCGGGAGCCAGCTT 468228 29 100.0 32 ............................. AGACCACGCGCGTCAGGATGTACCAACGACTG 468167 29 96.6 32 ............................T TACGAAGTCAGCGTGTACGAATACGAGCACGG 468106 29 100.0 32 ............................. GCGGCCGAGAGCACCTTGACCATCATGTTGGC 468045 29 100.0 32 ............................. GCGCACGTCCAGGACGCGCAACTCAGCCAGCC 467984 29 96.6 32 ............................T GTCATGCAACAGCGCAGTCAGGGTCTGCCGGT 467923 29 100.0 32 ............................. AGCAGGGACGCGCGGCTGGGCATCATGGACGT 467862 29 100.0 32 ............................. GGGCAGGGTGCCATCGTGGCGCAGCTGCCTGC 467801 29 96.6 32 ............................T GTTGATACGCCGTTCCACGCATTTTGTAGCCA 467740 29 96.6 32 ............................G GCGTGTGGGACACCGTATGGTCGGCTATAAGC 467679 29 96.6 32 ............................T TCACTAGGCGTGAGAACAACACGCCCATGCTG 467618 29 96.6 32 ............................T CTTGGTGTACTTTTTGCCCGGTGTCCCATCAT 467557 29 96.6 32 ............................G CAGGGCGATTATTACTCAATCAAGGGCCACAT 467496 29 96.6 32 ............................A ATTTCGATACCGAGCACAAGAAGCTCAAGGGT 467435 29 100.0 32 ............................. CGGCCTCGGCAGCAAACTGGCGCTGCGTGAGA 467374 29 96.6 32 ............................T GACCGGGTTGCCGAGATTCAAGGCAAAACAAG 467313 29 100.0 32 ............................. AAGACCGGCACAGTCTATTAAGCTAGCTGTGC 467252 29 96.6 32 ............................T AATTCTACAATCCTCGCCAAAGCATATCTAGA 467191 29 96.6 32 ............................G AGGTCGAACATGCGGTTGTAGGAGAGCCGGCG 467130 29 96.6 32 ............................T CGGAATATCGAACGCTCTTATCGTGGTAATAA 467069 29 96.6 32 ............................T GCGTCGTTCCTACGCCGTCCTCTGCTTCTGCT 467008 29 96.6 33 ............................T CTCATGGCCCGCCGGCTGACGGTGAGCGTGGAG 466946 29 100.0 32 ............................. GTCTTGTCCATCAGGTGCAGCTGCTCCATGTA 466885 29 100.0 32 ............................. GAGTCTCACGGAGCCGCTGTGTCCCTCATCAT 466824 29 96.6 32 ............................T CCACGCCAAGCACGTGCCGCTGGGGCATATCC 466763 29 96.6 32 ............................T CTTCTGGGGGCCTACCGTACCGGAGAAGTTCG 466702 29 100.0 32 ............................. ACGGCCCGTGTCTTCTTGCTTGCCTTATCCAT 466641 29 100.0 32 ............................. TCGCCCCTGCGTTGGCTTGCGCGTAAGCATTG 466580 29 100.0 32 ............................. AACTGGGACAGCAATGCGAAAGCCGGAATCCC 466519 29 96.6 33 ............................T TAGGAGGATATGCATGCGATGGTCTCATATGCG 466457 29 100.0 32 ............................. TTTTTGAAGCTGACTCTGCCGTCTTTCATTGC 466396 29 100.0 32 ............................. ATATACGGGTCAGCGGGCAAAGGCGTCGGCTT 466335 29 96.6 32 ............................T TTCCCTGGACAGCAAACAACCCCTGCATAAAT 466274 29 96.6 32 ............................T CACGAGGAGGGGACGCGCCAATGTCTGATACG 466213 29 100.0 32 ............................. TTGACGATCCGCAGCCTGGGGGTCATGTCCGG 466152 29 100.0 32 ............................. GAATCCCAGGCGTCGAAGTATCCGATCCTCAC 466091 29 93.1 32 .......................A....G TTCAGCGGCTACTTCAAAAGTGGTTGATTGGG 466030 29 96.6 32 ............................T CAACGGATCATCGATATCAGTGGTCAGGATAT 465969 29 100.0 32 ............................. ATTGATAGGAAAGTGAGGACAGTTTCAATGGA 465908 29 100.0 32 ............................. TGCTCAAACGGGCTGTTCCAGTTGTAGGTGAG 465847 29 100.0 32 ............................. AATGATATTACCCCAACTGGAGGCAACGGTAG 465786 29 100.0 32 ............................. TCGGACATGGTATAGATACCAAGCCTGACATC 465725 29 100.0 32 ............................. TCCTTGTCATGCACATCCTTGGGTGTCAGCAT 465664 29 100.0 33 ............................. GACCCCAAGGAGGCCCTGACGGTGGACGGTGAC 465602 29 96.6 32 ............................T GCTCGTTGGATGCATACCGATACATGGCATCT 465541 29 93.1 32 .....T........T.............. CGTGCAGAGCTAGCTACAGCCATGTCAGTGAG 465480 29 89.7 32 .....T........T.............T GGTTTCCGGTTTGTCGTCTTTGCCTTTAGGTT 465419 29 96.6 32 ..........................T.. TGGATCAGGGATAGGGTTCAAGAAGGAGCCAA 465358 29 86.2 0 ......T......T...........C..T | ========== ====== ====== ====== ============================= ================================================================================== ================== 101 29 97.9 33 GTGTTCCCCGCATCCGCGGGGATGATCCC # Left flank : CACATCACCGCTAGGGTTCGGGACCGGCTCTGGGAACGCATCACAGGGCAGATTCGAACCGGCAAGGCCATTATGGTCTATTCCGCCCGCAATGAGCAGCATCTGAGTTTCAAAGTGCATCGCTCAGATTGGAACCCGGTAGACTGTGAAGGATTGACTCTTATGGAGAGGCCTACGGATGGCGGAGATGGCAGATCTGCGGGTGGTGGAAACCGATACCGCCGGACTGGTTGGAGCAATGCCAGCAAGTACAGACGTGCGGCGAGGTTCCGGCGCTCGCAATCCGGCTGAGCCCAAGCGGGTCTGCACTTTTCAGATGGGTTTTGCCGATGAGTGCCGAGTACTGATTATTAAGCCAGTGCATTGATAAGGAGTTTGGTGTATATGGTCTGAATTGTAATGGCTGAGACGGGGAATAGAGGGGGGGGCTGGAAATGCAAACTCATTAAAAATCAGAAATCTTGGTTATTGTATTGTTGGGATTGCAAGGATTTCTAAGT # Right flank : AAAGGACATCTAATGGATGCCTTCAGGTTCACCATTATGAGAGGAGACGACCAGAAAATGCATAAGGCTTTAATAAGTGAAATGGCATCCAGGGATTGTGCCTGCACCCGTCATGACAGCATTCCTGAGAATCTGATTGACGGCTATCCGCCGAGACACGCATAATCGAGAAAATGGGTGAAACTAAGCTCCTGGTCTGGAATTCGCTGGATGATGCGGACAAGAGAATGATCCAATCGGATTGCGCATACTACGGTACAGGCTGCGGCGGCGAAACAGAAACAGAGGTGAGTTTCTACGACGTTATCGGCATAATGCGATTCGACTGGTTCATTCACGTGCTCCCACATGCTGTTTCAATCAGCAAAAGAATCGCTATAGGAGCGTGGCGGAGAATCCATAACAACATTATGGTTTGAACATGAGTATGATTTAAACCCGAGCGTTTGATTCTCTGGGGATGATCCGGCCGTCTATTCGATCAAGAACGTGAGAATACC # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATCCGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATGCGCGGGGATGATCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //