Array 1 92452-91164 **** Predicted by CRISPRDetect 2.4 *** >NZ_FULK01000003.1 Clostridioides difficile strain VRECD0133, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 92451 29 100.0 37 ............................. TATTTTCATTTTTGAGAGTTACAAAACATCTCAATGA 92385 29 100.0 38 ............................. TAAATTCGTCTAACTTAAATTAATAATAGGAGCTTTTT 92318 29 100.0 37 ............................. ACAGTTGTATTAGCAACTTTAAAAGATATACAAGACT 92252 29 100.0 36 ............................. TTATTTTTAAGTCAACACTCTTTTGAGTTGGTGTAT 92187 29 100.0 37 ............................. CTATGACGTAAATAGTCTATACCCTTATGTAATGAAG 92121 29 100.0 39 ............................. CTTTTTGCACGTAGTAAGAAATCTAATTAATTTTTAAAA 92053 29 100.0 37 ............................. CCACTTGTTCTTCAATTATTTTATCTACGCAGCCTAA 91987 29 100.0 37 ............................. TAGTTTAATCTATAAATTATTCCGTTGTGGCTGTTTT 91921 29 100.0 37 ............................. AGTTTCAACGAAGACCTTTTATCTAATAAAGAAAAAC 91855 29 100.0 38 ............................. AAAAAAGTCTCAATAACACCAGTCGAAGCAGAAAAATC 91788 29 100.0 36 ............................. CATTGTCAACATCATCTAATTTTTTTGTTACTGTAA 91723 29 100.0 37 ............................. TAGATTTTTTCACAAATAAACTTAACGAGTACAATGA 91657 29 100.0 39 ............................. TAGTTTTAAACTTTTTTTCTGGACATATTACAACATCAA 91589 29 100.0 37 ............................. TATCTTTAGCATTATATTTTTTAGTATCAGATGTGTG 91523 29 100.0 38 ............................. ATCTTTTAATTTTTATAACTAACTATTTACAAATTCAA 91456 29 100.0 38 ............................. TCTATCCACCCCCTTTTTTATAAATTTGCATTAAAAAA 91389 29 100.0 37 ............................. AAAAATATTATAGATACAAAAAAAGATTCAGAAAACA 91323 29 100.0 36 ............................. AAGTCACACCGCCCTCCACACGACACTATAATAATA 91258 29 93.1 37 .............C.........A..... AGTATAATGTTGAAAAGTTAGAGAGTACAATCAAGAA 91192 29 69.0 0 A.....C.........AAT....AG..TA | ========== ====== ====== ====== ============================= ======================================= ================== 20 29 98.1 37 GTTTTATATTAACTAAGTGGTATGTAAAT # Left flank : TACAATTTATAGAGTGGAGTTCATACAAAAGATTATCCTCCCAATGTATAGAAGGGAGGTGAGTATGTATGGATAATTTTTTACAAGGTGTACTAGCAAGTTTAGTTGCCAGTTTAATAGTTTACTTAAATAGTAAATTATTTAAAAAAGTAAAAAGCCACTCTGGCAGGAGCGACTTTAGTTTTGAACTAAAAATCAAGTTCAAAAAGAATAAACATTAGTATTTGAACTTCACTCTATGTCTAAATAGATTGTAGTTCTTCTTGTTTTTATTATACCACAAATTGGTACAGATATTCAAAAATAATATATTTATGATATAATAAAAATGTAAATAGTTTTGCAGTGAGCGATATTTGTTACAAAGTAGGGCTTAATGCTTGAAATATAAGGTGTTGAGGGCATGTGATAAGCTTTATCATTTGCACTACTCATGGTTCACTGCAAATTTAAGAGAGTTGCACATGTGTAAGCATTGAAAATGCCCAGTTTATTTTGGG # Right flank : AAACATGTATTTATACTTAAATTCTGTACCTATATAAAAAAGTGAACTCTGTCAACAAAGCACTTTTTTATATAGATAAATTATCATTTTGTTTTAAGATAGAAGATACTAATGATAACTGTTTATCATTAGTATCTGTATGTACATAAAAGTTTAATTTTTTATATAAATTTGCTCTTTAGAAAAATGAGCAGTATCAATAAATATATTGTCTAAATTTTTTCTAGGAACTAGTTGACTAGCTATAAGATTAGCTTCAACTCTTTGATTGTTAGACTATGAAATTAAATTTAAAGGTTCATTCTTGGTCGTATAAATAGCTTTATTATTCGTATGTACTATAACAATTTTTGCCATCTGCTTTTGATAGATAAAGAGCTTTATCAGCTTTAGAAAATAAATCTTTATATAATTTAGTTGAATCATCAGTGAAGGCAATACCAATACTTAATGTTATTTTATGATTGTCCTTTACTTTTATTTTACTCGCATCATTTAAA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTAAGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 18217-18841 **** Predicted by CRISPRDetect 2.4 *** >NZ_FULK01000001.1 Clostridioides difficile strain VRECD0133, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 18217 29 100.0 36 ............................. ACATTAACATTAGCAACACAATTAATAACGATTTGT 18282 29 100.0 37 ............................. AGAGCAGATGTCTGGTGTTTTGGATTCCCATGTCAAG 18348 29 100.0 36 ............................. TGAAAATCAATAGATATTCTTATATCATTGGTATCT 18413 29 100.0 37 ............................. ATAAGAGTGGTTTAAGAAAATAAGTTATTTTTCAAAA 18479 29 100.0 38 ............................. TCGAATGCTATAATTTTAATATATAAAATAAATGGAGG 18546 29 100.0 38 ............................. ACTGTTATTTTAGCAACACTTAAAAATTTACAGGACTT 18613 29 100.0 38 ............................. ACGCTTCCTACTTTTGAAGTTCATAAAGATGATTTAAA 18680 29 96.6 37 .......................A..... AGCAATTCTGATATTTTTATTCTAATCATTTGAAATC 18746 29 100.0 38 ............................. CCATCTTTTGTTGCTTTACATAAATTTATATTACTTAT 18813 29 89.7 0 .................CA........G. | ========== ====== ====== ====== ============================= ====================================== ================== 10 29 98.6 37 GTTTTATATTAACTATATGGAATGTAAAT # Left flank : GATAACCATAATAAAAATAGATATCTATTTTTAGATTAAAAATAATATATCATAAATAAAATAATAAGAGGTAGATACAGTTTTAAGGGAATACAAAAGTTTTTAATTAAACTATGCTTGTTCAGATAGATATTTATTTAAGAAAAAAGACTATTAAAAGCAATATACAAGAATGATATATTAGATTGATTAAACAAGCATAAATATTATGTAAAAAACTTTAAGTTATAGAATTTAAATCTAATGTAGATAGATTACGTTTTTTTGCTTTTATTATGGTATAAATTGGTATCAATATTCAAAAGTAATATATTTATGATATAATAAAATTATAGGAATTTTGCAGTGAGCGATATTTGTGAAAAAATTTGGCGTAACAGTTGAAATATAAGGCGTTGAGAGTGCATGATAAGCGTTATCAATTGCACTATTGCTCGTTCACTGCAAATTTAAGAGAGTTGTATACGTGTAAGTGTTGAAAATACTAAGTTTATTTTGGT # Right flank : TTTTTATAATTTTCTTTTAATGTGTTATCTTATGATTATCTAGTTATATTAGCATACAAAAATATAATAAAATTACACTATATTATAAAAACCAAAAGGTAGTATAGAAATCCTATTACCTTTTTATTATTAATTTTATCAGTGTTTTATTATAAATAGCTTACATAATTACACATTTTTTCTGATTAAATAATATGATGCTATTGTTATAATAGATACTAATGCTAATGATGTTATTGCAGTATCTAATCTTCTTATTAATAAACTCATTTCTATATATTCAAATTCTATTAAATATTGATAAAATATTTCTAGTTTAACAGCTTTTTCTCTATCTATATTTCCATACTTTAACTCTAATTTATCTAAAGATTTTTTATTACAATAATTAACTTTATGTTTAATTAAATATCTTATTGTAGCACCTATTACAATTTTCACTCTAACAAGTATAAATATAATATTCCATCCAAAAGTTAAGAGGGGATATCTTTTTTATG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATATGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 110398-110974 **** Predicted by CRISPRDetect 2.4 *** >NZ_FULK01000001.1 Clostridioides difficile strain VRECD0133, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================= ================== 110398 29 100.0 35 ............................. CACAAAAAATATTGTTTCGGTGATAAGGTTGACCA 110462 29 100.0 61 ............................. GCTTCAATTTCTTTAGCTCAAATAATACTAGATTCTTTAGCTCAAATAATACTAGAAAGTG 110552 29 100.0 36 ............................. AATTTTGATAGGGATATTTTTCAAGAAATAACTGGA 110617 29 100.0 37 ............................. ACATTTAAACCTGTTGCAAAAGCATTATCTGAATATG 110683 29 100.0 38 ............................. TAATTTAATATTCTCTGGATTTGGTTCTCCATTTATGC 110750 29 100.0 36 ............................. AGAACTTTTTTATATCAGAAGTACTTGACATGATTG 110815 29 100.0 36 ............................. ATAGATAGTTTTTGTTCTATCTTAACTCTTAGAGGA 110880 29 100.0 37 ............................. GCTTTTGGGGAAAAACTAGGTGTCAGTAAAGATGTTA 110946 29 89.7 0 .....................C.TA.... | ========== ====== ====== ====== ============================= ============================================================= ================== 9 29 98.9 40 GTTTTAGATTAACTATATGGAATGTAAAT # Left flank : ATTATATGTTATAATAATTGTAGCAAGGATAATAATCGAAAGTGCGAAGGGTGATTATTTTCATATTAAACGCCAAATTCCAAATAAGGAAGGAGGTGAAATTATATGATAGGTTTTTTATTAAGCATACTAGCTGGTGTTATATCAGCTTATATTTATGACAAAATAAAAAATCACCCAGACGCCAATAAGGGTGATTTAAAAAAATAATATTTTCACTTAACAACTGAAAATAATCACTCTTTGTAGGAGTAAATTATTTCCTTGCTTTTATTATACCACAAATTGGTACAGATATTCAAAAATAATATTTTTATGATATAATAAAAATGTAGAGATTTTGCAGTGAGCGATATTTGTTACAAAATATGGCTTAACACTTGAAATCTAAGATGTTGAGGGTGTGTGATAAGTGTTATCAATTGCACTATTGCCCGCTCACTGCAATTTTAAGAGTATTGTATATATGTAGGTATTGGAAATGCTAAGTTTATTTTGGG # Right flank : TTAAAAATACTGAAAAACACTTACTTTTATGGTAGGTGCTTTTTTATATTAAAATCTGTGTACTTAATTGAAATATTTGGTAAAATATGTAAGAATTGTATGATATAATAATTGTAGCAAGGAAAATAATAATTGAAAAGTGCTAAGAGTGGTTATTTCCATATTTGAATACCAAATTCCATAACGGAAGGAGGTGTAACAGTATGGTGATAAATTTTTTATTGAGTATACTGGCTGGTGTTATATCAGCCTTCATGTATGAGAAAATAAAAAACCACTCAAAGGCCAATAAGAGTGGTTTAAAAAAATAATTCTTTAAATCAATTTTGATGGAAATAGCTACTCTTGTATAAAGTAAATTATTTCCTTGCTTTTATTATACCACAAATTGGTACAGATATTCAAAAATAATATTTTTATGATATAATAAAAATGTAGAGATTTTGCAGTGTTCGATTTTTGTAATAAAATATGGCTTAACAATTGGAATACAAGGCATT # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.18, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATTAACTATATGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 3 111577-112527 **** Predicted by CRISPRDetect 2.4 *** >NZ_FULK01000001.1 Clostridioides difficile strain VRECD0133, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 111577 28 100.0 39 ............................ TTTTTTTAGTTAGTATTATTTTTGCTTCAAGGGGCAATG 111644 28 100.0 39 ............................ TATAAAAAATGCAAATATAATCAAAATTATCATTCCTAA 111711 28 100.0 39 ............................ TATAGGTTACAGCAGTAAACAGACTAACTGGAACAAATC 111778 28 100.0 37 ............................ TTCTGATGACATGAAAGAAATACTTGATATTTTTAGT 111843 28 100.0 38 ............................ TATTAAAAAAGAGTTAGAAGGTGGATTTGCAAAAATTA 111909 28 100.0 37 ............................ TAGTTGTCACAATATTATTTTTAATTTCTCCTAACTT 111974 28 100.0 38 ............................ TTTAGGTTTACAATTTAAACATCTAAAGTCAAGTAAAA 112040 28 100.0 37 ............................ GCCAGAAGAAGCCGCATCTGCAATAAAGAAGTATGGA 112105 28 100.0 38 ............................ GATTGAAAAAACGTCCAAATAGCAATATAATTTAATTA 112171 28 100.0 39 ............................ GATTTATGTCTGATTTGTGTCCAAAAATAACCGATTTGT 112238 28 92.9 38 ................G...T....... GACACCTCCAAACACTGCAATTTCTCCTGTTTTCAATA 112304 28 92.9 37 ................G...T....... GCCTATAGGAAGCTTAACTATATGTTCATAAAAAACA 112369 28 92.9 38 ................G...T....... TAATATAACAAAGTGGATGTTCTCTAAAAATAAAGAGG 112435 28 100.0 37 ............................ TTGCTGTGATTTCACTAATAAAACAATTAATAATTGT 112500 28 75.0 0 ...A............G....GAAA..C | ========== ====== ====== ====== ============================ ======================================= ================== 15 28 96.9 38 GTTTTAGATTAACTATATGGAATGTAAA # Left flank : TATAATAATTGTAGCAAGGAAAATAATAATTGAAAAGTGCTAAGAGTGGTTATTTCCATATTTGAATACCAAATTCCATAACGGAAGGAGGTGTAACAGTATGGTGATAAATTTTTTATTGAGTATACTGGCTGGTGTTATATCAGCCTTCATGTATGAGAAAATAAAAAACCACTCAAAGGCCAATAAGAGTGGTTTAAAAAAATAATTCTTTAAATCAATTTTGATGGAAATAGCTACTCTTGTATAAAGTAAATTATTTCCTTGCTTTTATTATACCACAAATTGGTACAGATATTCAAAAATAATATTTTTATGATATAATAAAAATGTAGAGATTTTGCAGTGTTCGATTTTTGTAATAAAATATGGCTTAACAATTGGAATACAAGGCATTGAGGGTATGTGATAAGTGTTATCATTTGCACTACTACCCGCTCACTGCAAATTTAAGAGAGTTGTATATGTGTAGGTATTGAAAATACTCAACTTATTTTGGG # Right flank : CTAAATAAACAAAGAAAGCACTTACAAATATGTAGGTGCTTTTGTTTTGCTCAAATTGGTCGGTTGAGTGAAATAATTAGAAAAAATTAGTAAAAACTAGTAAAAACTCTTGAAAAGTGTCGCGATACAATGTATAATTATATTATCGCGATACAGAAAAGAGGTGAAAATTATTACTGATAGCAGTAGAGCAGATTACTTCAAGCAGAGACGACAGAATAAGAAAACTTTTAGTGTTCTACTAGATAGAGAGAAAGTAGAAAAAATTGAAGAACATTTAAAAAAGCAGAACAAGACTAAAACTATTTGGCTTGAAGAAAAGATTAATGAAGAGTTAGAAAAAGAGGAATAAAAAATAAGAGACGTTCTCCCCGACCAAAGATTGAACATCCCTTATTGACGTATATTATATACACTAACTATAGTATACGTCATTCCTTAAAAAAATTCAATTAAGGAGTGTAATAGTTATGGAAAATTTAATAGTAAAAGAGTTTAAT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATTAACTATATGGAATGTAAA # Alternate repeat : GTTTTAGATTAACTATGTGGTATGTAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 4 114181-114405 **** Predicted by CRISPRDetect 2.4 *** >NZ_FULK01000001.1 Clostridioides difficile strain VRECD0133, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 114181 29 86.2 35 .AA............A............G GGAGTAGGCAAGTTTTATAAACAAATAACAGGAAG 114245 29 100.0 37 ............................. TATATGGTGCTTTCCAGTCTTGTGGTTTTACAGGTTC 114311 29 96.6 37 G............................ GCGTTTAGGAATATGACAGCATCTATTAATACGACAA 114377 29 82.8 0 G...................AC.TA.... | ========== ====== ====== ====== ============================= ===================================== ================== 4 29 91.4 37 ATTTTATATTAACTATGTGGTATGTAAAT # Left flank : ATTGATTTAGAAGATAGTGAAGTTAAGGGAGTTTGGGAAACTAATGGAAGTTGGACTGGCACTGTAAATAAATATACAAAGAGTGTAATAGATAAGGTTAGAAATTGGATAGAGGAAAATAATAGACCTACTAAGATTACAGGTGAAAAGAAGAATTATCATGTGGTTTATAAGATTGAGTAAATTTATCAGTTGTATTAAATAATTTAGTTTAGTTTATTTTAGTTTTGAGGGGGATTAATACAATGCGTGAAAGTTTACTTAATGAATATAATTTAAAAACTGATAAGGATATAGAGTATTTTGTAAAATTTGTTAATGCACTATATGAACTAAAACAGAATAGTGAAGAAAAATTTCAAGAATATGCAGAGATACTAAGAGAAATACTTAGAGAACAAGAAGAGAGAAAAAATAAGTAAAATAATATGGATAAAGCACTTGGATATTATGTTGTTTCAAGTGCTTTATTTGGTAAAAAATGGTATAATATAGGTAGG # Right flank : TTAAAAATAATCAAAAACACTTACTTGAATAGTAGGTGTTTTTTTATTGAAAGGATGTGATTATAATGTAAAAATTTTACTTATATAGTATAATAATCTTATAAAATTATTGTGCTAGGGGGATTTGTTATGTTTTGTTCGAATTGTGGTGCAGAAATCACAGGCGTAGGCAAGTTTTGTTCAAGTTGTGGGGTTGCTGTAGAAACTGAAATTATTGAAGATAATAATATTAAATCAAATGACCTAATCGTTGATGCAAATGGAATAGAAATAAATATGACTGAAATTTATAGAAAATATAGAAAAGAAAAAGTAAATGCAATAAAAAATGTAATGGAAATAAGTGGTTTGAATATAAAGGAAGCAAAAAAAATAGTGGATTCTTCCTTTGAAGAGTTAAAAATCAATTTTATTGATGATACTATGAGCAATTCAGAAAAGGAAAAAATAATAAATACTCAAAATAGAAAAAATAATATTGAAAAAGCTCAACAAGAATC # Questionable array : NO Score: 3.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTATATTAACTATGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 5 249672-251081 **** Predicted by CRISPRDetect 2.4 *** >NZ_FULK01000001.1 Clostridioides difficile strain VRECD0133, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 249672 29 100.0 38 ............................. CTATTTCAAACTTAAAGTTAAAATCAAATTCAATATGT 249739 29 100.0 37 ............................. TCGTTATAAGTAAGACGTGAAGCATGAATATCTGTCA 249805 29 100.0 37 ............................. CTTGAAAATCCTCAGAAGCTAAAATCCCGAAAAACTG 249871 29 100.0 36 ............................. CCACTATTACTTTCTATGTCAGCTTTGTTAACTTCG 249936 29 100.0 34 ............................. AAATTCACAGAGCTTTGGTGGGAATATACAAAAC 249999 29 100.0 37 ............................. ATTAAAAGAATTACTATTACAACGACTACTATATTAC 250065 29 100.0 37 ............................. TTCGAAAGCGGTAAAACAGCATTATCACTTTCAAAAT 250131 29 100.0 37 ............................. CTGCTAATCCTGCTATTTTAACTATAGTTTCTACCGT 250197 29 100.0 37 ............................. TCAAGACTTGTTCCAAAATTTTTCACTCCAGCGCCAG 250263 29 100.0 38 ............................. AATAAAAATTACACTAATGTAGACTTAATTCCTTCCGA 250330 29 100.0 37 ............................. TTTTTAAAGTAATGGTTACTTTTTAAAATAGAAAAGT 250396 29 100.0 37 ............................. ATTTTTAAAAATGTTGGTGATACATTAAAATCTATGG 250462 29 100.0 36 ............................. TTTAGTATAGATTCTAATGTATACTATTCAACTAAA 250527 29 100.0 35 ............................. AGAGTTGAGGTTGAGTTGGAGGATATTATTTAAGG 250591 29 100.0 37 ............................. TTTGAAAGTTGTAATATAATAGATTAAAAAACTAATT 250657 29 100.0 36 ............................. CAACATGTCAGTAATATTGAAACAGGAAATTCGAGT 250722 29 100.0 37 ............................. AACACTTTAAAAACTAATGTATTCAGTATAAGAGATT 250788 29 96.6 37 ...............T............. CTTGTTAATGCAAATAAACAACATAGCACTATTAATA 250854 29 96.6 38 ...............T............. AGGGTTTCTGATAAAATCTTCAAACATGTAAAATATGT 250921 29 93.1 37 ...............T.A........... CTTATACTTAGTTAGAACTATATATCGACACAAATAT 250987 29 86.2 37 .C.............TA......A..... TGCAATTTTTATTCGTTGTCCAATCGCTTTGAAATTT 251053 29 93.1 0 .......G.......T............. | ========== ====== ====== ====== ============================= ====================================== ================== 22 29 98.4 37 GTTTTATATTAACTAAGTGGTATGTAAAT # Left flank : CTATTATTATATATAACTGACATTTAAGTGACATTTAAGAAAAATATAATGCCTACTTACATAAAATGGAATGTTATTTAAAGAGAACTTTGATTATATTTTCAAAAGTTTTTTTATCCATATCGTTTAAAACAAGAAAATATCTATTCATAGTTATTTTTATATTAGTATGTCCTAATCTTTCAGAGATGATTTTTATATTAGTTCTAGCTAGAAGAAGAACTATTAGAATAGATAATATAGTAAGTATTTACAAATATGTAGGTGTTCTTAAATTGATAAATTATTCCATTTTAATTTTATAGTTTGAATTTTATGATATAATAAAAATATATAAATTTTGCAGTGAGCGATATTTTTGATAAAGTAGGGTTTAACAGTTGCAATGTAAGGGATTGAGGGTGTATGATAAATGTTATCAATTGCACTACTCATGGTTCACTGCAAATTTGAGAGAGTTGTATGTGTGTAAGTACTGAAAATACTTAGTTTATTTTGGG # Right flank : TTTGCAACAAGTATAGGTAAAATACCCCAATAATTTATACAGCATTTTATCCTTTAAAATATAATTATTTTTTATCATTTGTAGTAAATAATTACCAGATAACATTGACTTTAGTTTTAATGATTAAAATATAAAAGTAGAATAATTATAAAAAGTATTGAAAAATTTATAAATATATATAATAAAACTTAATGACAAGATATTAGATATAAAAAATAATTACCTTATAAATAGATTGAAATTTATGAATATTCATACTATAATTTAAATATAAGGAGATGCCCTTTGAAAATAAAAATTAAAAAATATTTAATGCTATTACAATAGGAACTAGAACTACACTTAATAAATATACAGAAATTAGATTTGGCTCAATATAAAATACAAATATAGAATTTAGGTGTTTTTTATGAAAAAATTTTTATATGCTTTATATAGTTTCATTGTTATTATAGCTAATTTTAGATTAAAAGAAAAAAATTATAACTTTATTTTATTAG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTAAGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 6 923738-923118 **** Predicted by CRISPRDetect 2.4 *** >NZ_FULK01000001.1 Clostridioides difficile strain VRECD0133, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 923737 29 100.0 36 ............................. TATCTTTTTTCAGTTTTTTCAATCTAGTAATATCTC 923672 29 100.0 36 ............................. GATGGAAGCACTAAAGTAACTAGAACAGTAAAAATA 923607 29 100.0 36 ............................. ATCGCTCTAAAATCTAAGTCCATTTTTGCTTATTCC 923542 29 100.0 38 ............................. GTTTGGGGTTAGCGCAAAAGAGTCTTATAACTTGATTG 923475 29 100.0 36 ............................. TGTTTTTAATTTAAAAATTACAATAAATTCCATCTA 923410 29 100.0 37 ............................. AGAATAGAATCTAACATATATACACCTCCAATTAAGG 923344 29 100.0 37 ............................. CACTAGGACAGGCACTCCACTTCTAAAGCTTATACTT 923278 29 100.0 38 ............................. CTCGAATCAGGATATAACTATTTAAAAGAAAACATAGA 923211 29 100.0 36 ............................. TGCTGTGATTTCACTAATAAAACAATTAATAATTGT 923146 29 86.2 0 ................G....T.CA.... | ========== ====== ====== ====== ============================= ====================================== ================== 10 29 98.6 37 GTTTTAGATTAACTATATGGAATGTAAAT # Left flank : TAATGTAGATAATGTTGAAAATTTAGAATTCAATGAGTTTGAACTTAAAACCGAAGAAGAAGAGAAGCGAGAACAAGAGAAAATAGAACAAGAAAAAAACAGTTATAATAACTACATTCAAAACAGAGTGGTTGACCCACTAGATAGAATAAAGAAACTAAAAGAGTTGCTAGATTCAGGAGCAATTACATAGGAAGAATATAATAAAAAGAAAAAAGAATTATTAGAATAGATAATATAGTAAGCACTTACAGGTATGTAGGTGCTTTTAAATTTACAAAGTATTCCATTTTAATTTTATAGTTTAGATTTTATGATATAATAAAAATATAGAAGTTTTGCAGTGTGCGATATTTGTTACAAAGTAGGGCTTAATACTTGAAATCTAAGATGTTGAGGGTGCGTGATAAGTGTTATCAATTGCACTATTGCCCGCTCACTGCAATTTTAAGAGTATTGTATATATGTAGGTATTGGAAATGCTAAGTTTATTTTGGGGT # Right flank : TAAATAAACAAAGAAAGCACTTACAAATATGTAGGTGCTTTTATTCTGCTCAAAATTGGTCGGTTGGGTAAAATAATTAGAAAAAGTTAGTAAAAACCTATTGACTGTAACTCGTTACAATATTGTTATTAATGTAACGAGTTACAGAAAAGAGGTGAATAAAATAGCAACTAAAAGTAGGGCAGAGTATATGAAAAATCGTCGAAAAGATAAAAGAGGTTTTAGTGTACTTTTAGACAAAGAAAAGTTAGATAAATTTGATGAAGTATTAGAGGAAAAGAATCTAACCAAGAAAGAATGGCTAGAAGAAAAAATCGACGAGGAACTGGAACAAAAGGAATAAAAAATAAGGGTCACTCCCACCGACCAAAGTTTGAGTAACCCCTATGACGTATACTATCGTATATCAATTATAGTATATGTCATTCCTTAAAAAAATCAATTATTAAGGAGTGTAATATTATGAAAAATGAATTAATGATGTTTGAAGGAAAAGAGAT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATTAACTATATGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 7 1176704-1176145 **** Predicted by CRISPRDetect 2.4 *** >NZ_FULK01000001.1 Clostridioides difficile strain VRECD0133, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 1176703 29 100.0 38 ............................. GATAAATATTACGAAAGAGCAGCAAGTGTATGCTCAGA 1176636 29 100.0 37 ............................. AGAAGTATAATTTTATTTAAATTTAACCTTTTGACTT 1176570 29 100.0 36 ............................. AAAGGTGTCCATTGATTTCTTTCAGTTTCGGGAATA 1176505 29 100.0 37 ............................. TGTTTTCCATAAACATTTCTAATTGACTTTTATTGTT 1176439 29 100.0 37 ............................. TATCCTTGTATTTGCCTAACGCGATATAGAGCAAAAA 1176373 29 100.0 36 ............................. GCTATAGAAGTAGCAGACTTAGGAACATCAGAAAAA 1176308 29 100.0 38 ............................. TTGTTTAGGTCAAGTCTAATTTGACGTATTAAAGTATA 1176241 29 100.0 39 ............................. CGTATTAACACCTGTTCGGCACTATCACAATAAACACAA 1176173 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 9 29 100.0 37 GTTTTATATTAACTATATGGAATGTAAAT # Left flank : GGAGTTCATGTATCAAAAAATTATCCTCCCGACGTTAAGAAGGGAGGTGAATATACATGGATAATTTTTTACAAGGCATACTAGCAAGTCTATCTGCTAGCTTAATAGTTTATATAGCTAGCAAACTATTTAGAAAGCGTAAAAAACCACTCAAAGCGGCAACTAAGAGTGGTTGGGAATTTGATTTAAAAATCAGATTCCATAAAACTAAGTAATTTCTAAATTATGAACTCCACTCTACAGCAAAATAGATTGTAGTTCTTCTTGCTTTTATTATATCACAAATTGGTACAGATATTCAAAAATAATATTTTTATGATATAATAAAGTCATAGAAATTTTGCAGTGTTCGATTTTTTGAAGAAATTAAGGCTTAACAGTTGAAATATAAGGCATTGAGGACTTGTGATAAGTGTTATCAATTGCACTACTCATGGTTCACTGCAAATTTGAGAGATTTGTATATGTGTAGGCATTGGAAATACTCAATTTATTTTGGG # Right flank : TGTATCCAAAAAATTACAATAATCATACGAACTGCTAATATAAGCAGTCAATATATGTGTACATTTATCCATTTTATCTCTAAACATATAAATTATTATCCCCTTAAAAAACTTTCATAAAAACAAAAAGAACAATATCTCTTTGGCAACTGGCTGACATAACTCATAAGATATTTATATAAGTCTTAGTCCCTATAGCTTTGCGTCACTAGATTTCTCTAGTTTTGCCGATTTAGTTTTATTCTATAACTAAATAATACAATAGAATTAGTTATTATTCAACAAGATTGTTTGAAAATTGAATAAATTTATAGGTATGAACGTAATTTCACACTTAAAAAACAGACTAAATACGTAGAATATATAGAAAAATTTACCTGTAGTTTTTGTGATAAAAAGCTCCTATTATTAATTTAAGTAGATAAGTTTGAGGAAGTGACATAAATTGAAAGAAGCAATATATTATGTTGAATAAAAAATTACCAGATGCAGAATTAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATATGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 254800-252663 **** Predicted by CRISPRDetect 2.4 *** >NZ_FULK01000004.1 Clostridioides difficile strain VRECD0133, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 254799 29 100.0 37 ............................. CAATAATTCATAAAATCTTCATAATTAGAAAAAGAAC 254733 29 100.0 38 ............................. GGAACTAAAATTGATGGTAAAACTTATACAGTAACAGA 254666 29 100.0 37 ............................. TTTTACTATTAAATCAGTTAGGATTCTGTTTTCTTTT 254600 29 100.0 37 ............................. TAATGAAGAATGCTCTATATAATAATGTTTGACTTAG 254534 29 100.0 36 ............................. CCATTAAATGTAAATTTTTCATATTTATTACTAGAA 254469 29 100.0 37 ............................. TTGTTAGCCCCTCCTTTCAAATCCGGATTTAAAATCG 254403 29 100.0 36 ............................. ACAATCTCTTTAAGATTATTTTATATCTCATTGAGA 254338 29 100.0 37 ............................. TCCTTTGACTTAGCATTATTTGTGCGGAACTTTAAAT 254272 29 100.0 37 ............................. TTAATTTTCTATTCTAGTAGTATAAAAATGATTCAAA 254206 29 100.0 38 ............................. AGTGGTACGGCAAAAGTATTACTATCAAAGCCTTCTCC 254139 29 100.0 36 ............................. TAGTTTATGTTAAATAGCATAAAAATATTCTTAAAA 254074 29 100.0 37 ............................. ATGTAACGTAAAGTTATCGTTGCAGAACTATGATTAA 254008 29 100.0 37 ............................. CCATTTTTTAGTTATTTTTATACATAACAGTTCTTTC 253942 29 100.0 38 ............................. CCTTTTTCTTTTTATTAGCTGTGATATAGTAGTGTCTT 253875 29 100.0 37 ............................. ATTTTTAAAAATGTTGGTGATACATTAAAATCTATGG 253809 29 100.0 36 ............................. GAAACATACAAACCAACTGCTGACTCAGGGAGTGTA 253744 29 100.0 37 ............................. TGGTAATGCAGATGTCTATGGGTGATAAGTTTTCTGA 253678 29 100.0 37 ............................. TCATCTGGTACGCTAAAGTTTAATTTTTGAAGTGTAA 253612 29 100.0 36 ............................. TGGTGTATAATCTATGGCATTTACTACAGCTTTATT 253547 29 100.0 36 ............................. TGATAAGCAAAGTCAAAAATAAACATTCCTTTTGGT 253482 29 100.0 37 ............................. AGGGTTGGGTTCTGGTGTATTAAGAGGTGAGGAACTG 253416 29 100.0 37 ............................. ACAGCAGTAGCAACACCCTCTTCAGCAGCAAAACAAG 253350 29 100.0 38 ............................. AAATATATTCTAGAAACATTTTTTAATAAAGAAAAAGC 253283 29 100.0 37 ............................. AAATAGCACCCCCTTATGGATTTTAGTGTTTTTTAAA 253217 29 100.0 37 ............................. AGGAATTACAGGGTAATAAGATAAATATAACGGAGAA 253151 29 100.0 38 ............................. AAGATTGTTTGAATTAGCTTTTATAATCTCATTTGCTT 253084 29 100.0 37 ............................. CTGCAATCATTCCGACTAAGTATAGAGTTGAAAAACT 253018 29 100.0 37 ............................. TACTTCATCACCTCCCCTCAAAATTGTTGGGAGGATA 252952 29 100.0 37 ............................. TTGGTTGTCCGTTGCCTGTGCCATTTATAATAATATT 252886 29 100.0 37 ............................. AGGATAAAGAAAAGACTCACACAAGATACAGTGTCAG 252820 29 86.2 36 .........C............GA...G. AGAATATTAGCAATATCAACGAGTATTTAGAAACTT 252755 29 75.9 35 A...........TA...CA....A....A TTGTAGAATCAACAATAGCATATACTAAAACATCC 252691 29 75.9 0 ACC.............A.CA...C..... | ========== ====== ====== ====== ============================= ====================================== ================== 33 29 98.1 37 GTTTTATATTAACTAAGTGGTATGTAAAT # Left flank : CATTTTATAAATGATGAAAGGTACAAAGTTTTAAAGGTGTGGTGGTAAGTATGTTTGTTATTGTTACTTATGATATTGTTGAAGCAAGGTCGTTAAATAGAATTAGAAGGATACTTAGAAAATATTTGACTTGGACGCAAAATTCTGTTTTTGAAGGCAATATTACTGAAGGAAAGTTACATAAATGTATTTCTGAAATAGAAAATATTATTGATAATAGCGAGGATTCAATCTATGTTTATGAGATAAAAAATCCTAATTCAATTAAAAAGAAATGTTATGGGATTGATAAGTATTCTGATGAAATGTTTATATAGGTTTGCAGTGAGCGATATTTATGCTAAAATAGGTGTTAACAGTTGGAATATAAGGGATTGAAGGTGTATGATAACTGTTATCAATTGCACTACTGCTCGCTCACTGCAAATTTTGATGTTTTTATTGAATTATAATTGCTTGATTGAAGTATTTTCAATGTATTCAATTATACCTATTTTGGG # Right flank : AAAATACACTTACCTACAAACATTATAAAATCAATACAAAAATGAGGTGAAACAAAATTTATGATAAAGAAATTAAACAGTAAAGACATAAATAAAATCATGGAAATATGGGAAAAAAGTACAATCAAAGCACATGACTTTATAAGTAAAGAATACTGGCAAAATAACTATAATACTGTTAAAAACGAATATATACCTATATCAGATACATTTGTATATGATGATGGAGATGAAATAAAAGGATTTATAAGCATAATAGATAAAAGCTTTATAGGAGCTTTATTTATAAAACCCAAATACCAAAATCTAGGTATCGGAGGTAAACTTTTAGATTATGCAACTAAAAAGTATAAAAATCTAAGCTTAGCAGTATATAAAGATAATAAAAAAGCAGTTGTGTTTTATAATAAAAAAGGTTTTAATATAGTAAAAGAACAAGTAAATGAAGATTCAGGATTTAAAGAGTACATAATGGAATATAGTAAATAATATGATTACAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTAAGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //