Array 1 49448-50539 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VSTQ01000013.1 Ligilactobacillus salivarius strain HENA17_3 scaffold13, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     49448	    36	 100.0	    30	....................................	ACAACAAATGTTAGCAGTGGCTGACTTACA	
     49514	    36	 100.0	    30	....................................	CAATAATTGCATCTACCACGTCAATCTTAA	
     49580	    36	 100.0	    30	....................................	TTATAACAAGAAAGATTTTTATCAAAATAA	
     49646	    36	 100.0	    30	....................................	AAGGAAAGTTAAGGTCAATGGTTTTACATT	
     49712	    36	 100.0	    30	....................................	TGGTCAAGTCGTCAATCTCACTAGGTGTTA	
     49778	    36	 100.0	    30	....................................	TGAGGCTTATATGTCACAACTCAATGCTTT	
     49844	    36	 100.0	    30	....................................	TCATGATATGTTTGTTCATGAAGTTAGAAT	
     49910	    36	 100.0	    30	....................................	TTGGAGAAGTGATCTTACTTTAGGTGGTTG	
     49976	    36	 100.0	    30	....................................	AAATTACGGAACTTTTGATCTAACTAGAAT	
     50042	    36	 100.0	    30	....................................	GCATTAGACGCTAAAAAAGTACAGTTAAGC	
     50108	    36	 100.0	    30	....................................	AATCTTATCGTATAATTACTAACATACGAA	
     50174	    36	 100.0	    30	....................................	CGCAATTTTCGATATTTTACCAATCAACCC	
     50240	    36	 100.0	    30	....................................	ACAACACTGGATATTTTAAGTTGAGAGAAT	
     50306	    36	 100.0	    30	....................................	TTTAGTGGTAACTCTAGTGGCGTAGCTATT	
     50372	    36	 100.0	    30	....................................	TAAAGACGCTGGATACACACCAATGGTTTA	
     50438	    36	 100.0	    30	....................................	ACAACTGGAGTTTGAGTACGTTTAGCTTGT	
     50504	    36	  80.6	     0	..........A.........T...AG...CG..G..	|                             	
==========	======	======	======	====================================	==============================	==================
        17	    36	  98.9	    30	GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC	                              	       

# Left flank :   AACAGACCGAATTAGTAAAAAGTATATGAATGTATTGATCAAGAAGATTATTGAAGACATCACAGATGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGTGAGATTTTGTATAAAATTGATATACCCTTACAAGCAGATTATGATAATGATTTAATAAGACTATTCAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAGTGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTATATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACT
# Right flank :  TAAAATACAAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGAGTAAACACACTATAGTGTGACATTACAGATAAAA

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.10,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [75.0-85.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0.27   Confidence: LOW] 

# Array family : NA
//