Array 1 10476-12618 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIGX01000022.1 Lactobacillus helveticus strain BD08 contig000022, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 10476 30 100.0 37 .............................. GGGCGTAGTCAGACAATTGCAAGATGAGGGAGCTAGA 10543 30 100.0 36 .............................. TAGTAAGTGATAAAGATGAAGTTTACTTGCCACAAG 10609 30 100.0 35 .............................. TGCAACACCAGCATTACTTGCATCAATTACTAAGT 10674 30 100.0 37 .............................. TACCAACTTTCATATAACGGTTTTGTTTTTTATCTTC 10741 30 100.0 35 .............................. CTTTAAAAAAAGCGTCTTACATTGTTTACCATTGG 10806 30 100.0 35 .............................. TTTATAATATCCTGCGCTCTTGACTGAATTATTTC 10871 30 100.0 36 .............................. CAAAATGGTCGATCAAGGTAAAATACCTTTGATTGA 10937 30 100.0 37 .............................. TAATGAGTTGTCACTATTGCGTTTCATAAATAGAGGC 11004 30 100.0 37 .............................. TTATCCAGATGGCTACTTTGATCGTGATGCTTGTCCC 11071 30 100.0 37 .............................. ATGCCATACTTGTCGGAAACACCGTAGTACTTTTCGC 11138 30 100.0 36 .............................. TTGTGCTTTGGTAACTGGCAACGTCCACACCATAGC 11204 30 100.0 36 .............................. TTATAAATATCATCATAGGCATCAATTAGACCCTTG 11270 30 100.0 35 .............................. TCTTTTTTAACAGCGTTAATTTTATTGCGTTCAAT 11335 30 100.0 36 .............................. ACATCAATTTGAGGAGGAACAGTAGCTACATACCCT 11401 30 100.0 36 .............................. ATCAGGAAGAAAGCCCGAACACCAAACCAAGTGCCA 11467 30 100.0 35 .............................. TATTCGATGTAGTCATCATAAATACAAATGGTTGG 11532 30 100.0 35 .............................. TAGCTTCTTTTTGATACGATTGAGCTTGACATCAC 11597 30 100.0 36 .............................. CTTGGCTTACCTTGACTAACTCCGCTTCAAAAGGGC 11663 30 100.0 35 .............................. AGATTTTCCAGCTTGTGTTGGTATTAATGTATTTT 11728 30 100.0 35 .............................. TGGCTTAATTCATGCGTACTATGCACCAGATCAAG 11793 30 100.0 37 .............................. TAATGTTGTTAATACTGTTAATGGCGATGACTGGTAC 11860 30 100.0 36 .............................. AAATAAAATACACGGTAATAAGTGGAAACCACTATT 11926 30 100.0 36 .............................. ATAAAATACACGGTAATAAGTGGAAACCACTATTAG 11992 30 100.0 36 .............................. TAGCAATAATATCCACTAATTTCAAACTGCCAAACA 12058 30 100.0 36 .............................. GCATTTGAGATTTAACAACACGTGTCATACCGGGAA 12124 30 100.0 36 .............................. GAATTAATTAAGTTGTTGGTCTTTAATGAGTTGTTA 12190 30 100.0 37 .............................. TGGAATAAGTCTTTGCGGATTTCATTGGTAAGCTTAG 12257 30 100.0 36 .............................. TGTTAAAAACGCAGAAGAAGCTCACTCAATGACCGT 12323 30 100.0 36 .............................. TACTTTGGCGAGATGGGACTAACTAACATTTTAACC 12389 30 100.0 36 .............................. AAACTTGAATGATCTATAGTACCTCTTTTTGAGTGA 12455 30 90.0 38 ............T.............G..T TTTTGAAAGTTTAATCTAAAAGTTTTAGTAGTTGGTAG 12523 30 83.3 36 ..C.........TC....G..........T AAAGCCGAATTTTACACCAACTTTACTAAATATGCT 12589 30 73.3 0 .A......C.......G...G..AA...TT | ========== ====== ====== ====== ============================== ====================================== ================== 33 30 98.4 36 GTTTTTATTTAACTTAAGAGAAATGTAAAG # Left flank : CCTATGAGCCTTATGTTATGGGATGGTAATAGATATGTATGTGATTCTGGTTTACGATATCGTAATGGATAAACAAGGTGCTAAAGTAAGTAGACATGTTTTCAAAATATGTAAAAAGTATTTAACTCATGTTCAAAATTCAGTATTCGAAGGTGAACTAACCAAGTCCCAGCTTGAAAGCTTGAAGAATGAGTTGGATAGATGGATTCGACAGAACGTTGATTCAGTGATTATATTCAAAAATAGAAATAAAGATTGGCTTGATAAAGAATTTATGGGTCAGGATTTAACTGATTTAACGTCGGATATATTCTAAAGAAGAATCTGTCGATGTAAGATACGAAGAAAATCCTGGGAGATCGACAGATTTGCAAAATGCCGGTACAATGATATTTGTGCGATTTGTCTAATGATTTTAGTGATTTTTGGATGCGTTTTTGGTTAGGTCGACAGATAGGGCCGTTGAATCTATTGATACAGTAGGACTGGTAGTTGCAACT # Right flank : TGTGTGATTAAAGTCAATTAAATATAAAACATAAAGATTTATATTTAATTTACGGGAAGGAAACTACAATCAAACATCCTACTAAAATCCTACCAATTAAACTGGTAAAATAGATAAGTAAGTATAGAGAACAATTTTTATAAAAGGGGAATAAAATGGCAGATGAAAAATTACTTCTAATCGATGGTAACTCTGTAGCTTTCAGAGCCTTTTACGCTCTTTATCGTCAACTAGAATCTTTCAAGAGTCCGGACGGCCTGCACACTAATGCCATTTACGCTTTTAAGAACATGCTCGATGTCCTTTTAAAAGACGTTGATCCAACCCACGTATTGGTAGCTTTTGATGCAGGAAAAGTCACTTTTAGAACAAAAATGTATGGTGAATACAAAGGTGGACGTGCGAAAACTCCAGAAGAGTTGCTCGAACAAATGCCTTACATTCAAGAAATGCTGCATGACTTGGGTATTAAAACTTATGAATTGAAGAATTATGAAGCA # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATTTAACTTAAGAGAAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //