Array 1 127012-130223 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJELA010000004.1 Acinetobacter baumannii strain MRSN576822 MRSN576822_contig00004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 127012 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 127072 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 127132 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 127192 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 127252 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 127312 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 127372 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 127432 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 127492 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 127552 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 127612 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 127672 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 127732 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 127792 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 127852 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 127912 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 127972 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 128032 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 128092 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 128152 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 128212 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 128272 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 128332 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 128392 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 128452 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 128512 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 128572 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 128632 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 128692 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 128752 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 128812 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 128872 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 128932 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 128992 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 129052 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 129112 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 129172 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 129233 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 129293 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 129353 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 129413 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 129473 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 129533 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 129593 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 129653 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 129714 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 129774 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 129834 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 129894 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 129954 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 130014 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 130074 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 130134 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 130194 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //